RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 TBC1D3CQ6IPX1 549 aa17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 FAM72DQ6L9T8 149 aa17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 POLNQ7Z5Q5 900 aa17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 NT5DC3Q86UY8 548 aa17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 FAM72BQ86X60 149 aa17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 PSTKQ8IV42 348 aaKnown RBP17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 TBC1D3Q8IZP1 549 aaPredicted RBP17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 SLC35F6Q8N357 371 aa17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 CCDC185Q8N715 623 aa17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 PIP4K2CQ8TBX8 421 aa17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 NTAN1Q96AB6 310 aa17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 SLC6A18Q96N87 628 aa17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 DDX56Q9NY93 547 aaKnown RBP17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 ZNF212Q9UDV6 495 aa17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 OR12D3Q9UGF7 316 aa17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 ANKRD6Q9Y2G4 727 aa17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 JRKLQ9Y4A0 524 aa17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 TP53BP1Q12888 1972 aaPredicted RBP17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 A0A1W2PPC4 97 aa17.37■□□□□ 0.37
PRPF40A-204ENST00000450303 WNT9AO14904 365 aa17.37■□□□□ 0.37
PRPF40A-204ENST00000450303 MCF2LO15068 1137 aa17.37■□□□□ 0.37
PRPF40A-204ENST00000450303 CER1O95813 267 aa17.37■□□□□ 0.37
PRPF40A-204ENST00000450303 FTCDO95954 541 aa17.37■□□□□ 0.37
PRPF40A-204ENST00000450303 CTNNA2P26232 953 aa17.37■□□□□ 0.37
PRPF40A-204ENST00000450303 PPP2CBP62714 309 aa17.37■□□□□ 0.37
PRPF40A-204ENST00000450303 PPP2CAP67775 309 aa17.37■□□□□ 0.37
PRPF40A-204ENST00000450303 CNTN1Q12860 1018 aa17.37■□□□□ 0.37
PRPF40A-204ENST00000450303 SLC14A1Q13336 389 aa17.37■□□□□ 0.37
PRPF40A-204ENST00000450303 RPS6KA1Q15418 735 aa17.37■□□□□ 0.37
PRPF40A-204ENST00000450303 EFHC2Q5JST6 749 aa17.37■□□□□ 0.37
PRPF40A-204ENST00000450303 RWDD4Q6NW29 188 aaKnown RBP17.37■□□□□ 0.37
PRPF40A-204ENST00000450303 ADAT2Q7Z6V5 191 aaKnown RBP17.37■□□□□ 0.37
PRPF40A-204ENST00000450303 DSG4Q86SJ6 1040 aa17.37■□□□□ 0.37
PRPF40A-204ENST00000450303 NAXDQ8IW45 347 aa17.37■□□□□ 0.37
PRPF40A-204ENST00000450303 ARFGAP1Q8N6T3 406 aa17.37■□□□□ 0.37
PRPF40A-204ENST00000450303 DCAF4L2Q8NA75 395 aa17.37■□□□□ 0.37
PRPF40A-204ENST00000450303 SETD7Q8WTS6 366 aaKnown RBP17.37■□□□□ 0.37
PRPF40A-204ENST00000450303 TEKT4Q8WW24 435 aa17.37■□□□□ 0.37
PRPF40A-204ENST00000450303 TNKS2Q9H2K2 1166 aa17.37■□□□□ 0.37
PRPF40A-204ENST00000450303 GOLPH3Q9H4A6 298 aa17.37■□□□□ 0.37
PRPF40A-204ENST00000450303 ZWILCHQ9H900 591 aa17.37■□□□□ 0.37
PRPF40A-204ENST00000450303 ATP13A1Q9HD20 1204 aa17.37■□□□□ 0.37
PRPF40A-204ENST00000450303 TM7SF3Q9NS93 570 aa17.37■□□□□ 0.37
PRPF40A-204ENST00000450303 NDFIP2Q9NV92 336 aa17.37■□□□□ 0.37
PRPF40A-204ENST00000450303 DNAI1Q9UI46 699 aa17.37■□□□□ 0.37
PRPF40A-204ENST00000450303 PPM1HQ9ULR3 514 aa17.37■□□□□ 0.37
PRPF40A-204ENST00000450303 HS3ST2Q9Y278 367 aa17.37■□□□□ 0.37
PRPF40A-204ENST00000450303 HYOU1Q9Y4L1 999 aa17.37■□□□□ 0.37
PRPF40A-204ENST00000450303 PCDHB9Q9Y5E1 797 aa17.37■□□□□ 0.37
PRPF40A-204ENST00000450303 ACTL7AQ9Y615 435 aa17.37■□□□□ 0.37
PRPF40A-204ENST00000450303 ACACBO00763 2458 aa17.36■□□□□ 0.37
PRPF40A-204ENST00000450303 ILVBLA1L0T0 632 aa17.36■□□□□ 0.37
PRPF40A-204ENST00000450303 C1QTNF3-AMACRE9PGA6 284 aa17.36■□□□□ 0.37
PRPF40A-204ENST00000450303 RNF103O00237 685 aa17.36■□□□□ 0.37
PRPF40A-204ENST00000450303 CTSLP07711 333 aa17.36■□□□□ 0.37
PRPF40A-204ENST00000450303 GJC1P36383 396 aa17.36■□□□□ 0.37
PRPF40A-204ENST00000450303 ACVRL1P37023 503 aa17.36■□□□□ 0.37
PRPF40A-204ENST00000450303 CETN2P41208 172 aa17.36■□□□□ 0.37
PRPF40A-204ENST00000450303 GRIA4P48058 902 aa17.36■□□□□ 0.37
PRPF40A-204ENST00000450303 SHC2P98077 582 aa17.36■□□□□ 0.37
PRPF40A-204ENST00000450303 SLC25A11Q02978 314 aaKnown RBP17.36■□□□□ 0.37
PRPF40A-204ENST00000450303 GNA12Q03113 381 aa17.36■□□□□ 0.37
PRPF40A-204ENST00000450303 PRAMEF14Q5SWL7 426 aa17.36■□□□□ 0.37
PRPF40A-204ENST00000450303 MEI1Q5TIA1 1274 aa17.36■□□□□ 0.37
PRPF40A-204ENST00000450303 FAM46CQ5VWP2 391 aa17.36■□□□□ 0.37
PRPF40A-204ENST00000450303 IL27RAQ6UWB1 636 aa17.36■□□□□ 0.37
PRPF40A-204ENST00000450303 MAP7D3Q8IWC1 876 aa17.36■□□□□ 0.37
PRPF40A-204ENST00000450303 CHST14Q8NCH0 376 aa17.36■□□□□ 0.37
PRPF40A-204ENST00000450303 OSBPL2Q9H1P3 480 aa17.36■□□□□ 0.37
PRPF40A-204ENST00000450303 AASDHPPTQ9NRN7 309 aa17.36■□□□□ 0.37
PRPF40A-204ENST00000450303 PPARGC1AQ9UBK2 798 aaKnown RBP17.36■□□□□ 0.37
PRPF40A-204ENST00000450303 FZD10Q9ULW2 581 aa17.36■□□□□ 0.37
PRPF40A-204ENST00000450303 PCDHA3Q9Y5H8 950 aa17.36■□□□□ 0.37
PRPF40A-204ENST00000450303 ALOX15BO15296 676 aa17.35■□□□□ 0.37
PRPF40A-204ENST00000450303 WNT1P04628 370 aa17.35■□□□□ 0.37
PRPF40A-204ENST00000450303 MAT2AP31153 395 aaKnown RBP17.35■□□□□ 0.37
PRPF40A-204ENST00000450303 CHRNA3P32297 505 aa17.35■□□□□ 0.37
PRPF40A-204ENST00000450303 CTNNA1P35221 906 aaKnown RBP17.35■□□□□ 0.37
PRPF40A-204ENST00000450303 CCR5P51681 352 aa17.35■□□□□ 0.37
PRPF40A-204ENST00000450303 ZNF135P52742 658 aaPredicted RBP17.35■□□□□ 0.37
PRPF40A-204ENST00000450303 RWDD2BP57060 319 aa17.35■□□□□ 0.37
PRPF40A-204ENST00000450303 TAS2R40P59535 323 aa17.35■□□□□ 0.37
PRPF40A-204ENST00000450303 SCAPQ12770 1279 aa17.35■□□□□ 0.37
PRPF40A-204ENST00000450303 TUBB2AQ13885 445 aa17.35■□□□□ 0.37
PRPF40A-204ENST00000450303 TRIP6Q15654 476 aaKnown RBP17.35■□□□□ 0.37
PRPF40A-204ENST00000450303 MANEALQ5VSG8 457 aa17.35■□□□□ 0.37
PRPF40A-204ENST00000450303 PYROXD2Q8N2H3 581 aa17.35■□□□□ 0.37
PRPF40A-204ENST00000450303 OR2A12Q8NGT7 310 aa17.35■□□□□ 0.37
PRPF40A-204ENST00000450303 HSPH1Q92598 858 aa17.35■□□□□ 0.37
PRPF40A-204ENST00000450303 ARRDC3Q96B67 414 aa17.35■□□□□ 0.37
PRPF40A-204ENST00000450303 SNRNP25Q9BV90 132 aaKnown RBP17.35■□□□□ 0.37
PRPF40A-204ENST00000450303 TUBB2BQ9BVA1 445 aa17.35■□□□□ 0.37
PRPF40A-204ENST00000450303 AP4E1Q9UPM8 1137 aa17.35■□□□□ 0.37
PRPF40A-204ENST00000450303 FARP1Q9Y4F1 1045 aaPredicted RBP17.35■□□□□ 0.37
PRPF40A-204ENST00000450303 CHD8Q9HCK8 2581 aa17.35■□□□□ 0.37
PRPF40A-204ENST00000450303 CABIN1Q9Y6J0 2220 aa17.35■□□□□ 0.37
PRPF40A-204ENST00000450303 CTAGE9A4FU28 777 aa17.34■□□□□ 0.37
PRPF40A-204ENST00000450303 H0Y8X5 98 aa17.34■□□□□ 0.37
PRPF40A-204ENST00000450303 KPNA3O00505 521 aaPredicted RBP17.34■□□□□ 0.37
PRPF40A-204ENST00000450303 HYAL3O43820 417 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms