RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 KELP23276 732 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 S100PP25815 95 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 DCKP27707 260 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 MNDAP41218 407 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 PIK3CBP42338 1070 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 ENTPD1P49961 510 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 PPP5CP53041 499 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 SIK1P57059 783 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 EIF3EP60228 445 aaKnown RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 PSME3P61289 254 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 FSTL1Q12841 308 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 DMP1Q13316 513 aaPredicted RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 FGL2Q14314 439 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 CDK10Q15131 360 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 STILQ15468 1287 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 PKN1Q16512 942 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 PTPN21Q16825 1174 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 BTBD16Q32M84 506 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 SLFN12LQ6IEE8 588 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 CDC73Q6P1J9 531 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 AFTPHQ6ULP2 937 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 ZNF782Q6ZMW2 699 aaPredicted RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 G2E3Q7L622 706 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 NIPA1Q7RTP0 329 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 NOXA1Q86UR1 476 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 CYP4Z1Q86W10 505 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 MIER2Q8N344 545 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 SLC25A41Q8N5S1 370 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 DPP10Q8N608 796 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 POU5F2Q8N7G0 328 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 ANKFN1Q8N957 763 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 KCT2Q8NC54 265 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 TERB2Q8NHR7 220 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 NKX2-3Q8TAU0 364 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 SH3RF3Q8TEJ3 882 aaPredicted RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 PHF10Q8WUB8 498 aaKnown RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 FAM136AQ96C01 138 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 EAF2Q96CJ1 260 aaPredicted RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 SIPA1Q96FS4 1042 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 CLPTM1LQ96KA5 538 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 FRMD6Q96NE9 622 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 NACC1Q96RE7 527 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 DPYSL5Q9BPU6 564 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 MTMR12Q9C0I1 747 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 PUS7LQ9H0K6 701 aaKnown RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 UNC93B1Q9H1C4 597 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 GOLPH3Q9H4A6 298 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 ACSS3Q9H6R3 686 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 ELAC1Q9H777 363 aaKnown RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 NIPAL2Q9H841 368 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 PIDD1Q9HB75 910 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 FOLH1BQ9HBA9 442 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 EXOSC4Q9NPD3 245 aaKnown RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 NCKIPSDQ9NZQ3 722 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 TMEM216Q9P0N5 145 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 NYAP2Q9P242 653 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 VPS28Q9UK41 221 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 MGAT4BQ9UQ53 548 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 PDE10AQ9Y233 779 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 PMF1-BGLAPU3KQ54 211 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 NID2Q14112 1375 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 SCN4AP35499 1836 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 ACEP12821 1306 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 SLIT3O75094 1523 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 E2F8A0AVK6 867 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 UBA6A0AVT1 1052 aaPredicted RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 SOBPA7XYQ1 873 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 E7ENX8 843 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 SULT1C2O00338 296 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 MDM4O15151 490 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 PAPSS1O43252 624 aaPredicted RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 CHST10O43529 356 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 AIREO43918 545 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 SLC19A2O60779 497 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 AVILO75366 819 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 RP2O75695 350 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 KRT34O76011 436 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 SHBGP04278 402 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 PSAPP07602 524 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 RBP1P09455 135 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 TSPAN19P0C672 248 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 CTRB1P17538 263 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 TNNI3P19429 210 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 TCEA1P23193 301 aaKnown RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 MYF6P23409 242 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 HOXD10P28358 340 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 CDC25AP30304 524 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 DDOSTP39656 456 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 ETV5P41161 510 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 SLC15A1P46059 708 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 RPS9P46781 194 aaKnown RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 GMPSP49915 693 aaPredicted RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 RPL14P50914 215 aaKnown RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 CEBPGP53567 150 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 CDH4P55283 916 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 CDC42P60953 191 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 LRP8Q14114 963 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 BTG3Q14201 252 aaPredicted RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 FASTKQ14296 549 aaKnown RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 PTGR1Q14914 329 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms