RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 CA8P35219 290 aa17.93■□□□□ 0.46
LMNA-208ENST00000448611 NUMBP49757 651 aa17.93■□□□□ 0.46
LMNA-208ENST00000448611 CSE1LP55060 971 aaKnown RBP17.93■□□□□ 0.46
LMNA-208ENST00000448611 SMAD3P84022 425 aaKnown RBP17.93■□□□□ 0.46
LMNA-208ENST00000448611 FPGSQ05932 587 aa17.93■□□□□ 0.46
LMNA-208ENST00000448611 RNF187Q5TA31 235 aaPredicted RBP17.93■□□□□ 0.46
LMNA-208ENST00000448611 ESRP1Q6NXG1 681 aaKnown RBP17.93■□□□□ 0.46
LMNA-208ENST00000448611 CCDC121Q6ZUS5 278 aa17.93■□□□□ 0.46
LMNA-208ENST00000448611 OTOAQ7RTW8 1153 aa17.93■□□□□ 0.46
LMNA-208ENST00000448611 SETD3Q86TU7 594 aaPredicted RBP17.93■□□□□ 0.46
LMNA-208ENST00000448611 DCLK2Q8N568 766 aa17.93■□□□□ 0.46
LMNA-208ENST00000448611 ADAMTS19Q8TE59 1207 aa17.93■□□□□ 0.46
LMNA-208ENST00000448611 DDX50Q9BQ39 737 aaKnown RBP17.93■□□□□ 0.46
LMNA-208ENST00000448611 TRPC7Q9HCX4 862 aa17.93■□□□□ 0.46
LMNA-208ENST00000448611 INSL6Q9Y581 213 aa17.93■□□□□ 0.46
LMNA-208ENST00000448611 MYLKQ15746 1914 aa17.93■□□□□ 0.46
LMNA-208ENST00000448611 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.92■□□□□ 0.46
LMNA-208ENST00000448611 LOC285095A0A1B0GVY8 99 aa17.92■□□□□ 0.46
LMNA-208ENST00000448611 GOLGA8TH3BQL2 631 aa17.92■□□□□ 0.46
LMNA-208ENST00000448611 KDELR3O43731 214 aa17.92■□□□□ 0.46
LMNA-208ENST00000448611 TSPAN3O60637 253 aa17.92■□□□□ 0.46
LMNA-208ENST00000448611 GJB3O75712 270 aa17.92■□□□□ 0.46
LMNA-208ENST00000448611 LATS1O95835 1130 aa17.92■□□□□ 0.46
LMNA-208ENST00000448611 ZXDBP98169 803 aa17.92■□□□□ 0.46
LMNA-208ENST00000448611 ZNF177Q13360 481 aaPredicted RBP17.92■□□□□ 0.46
LMNA-208ENST00000448611 ZNF235Q14590 738 aa17.92■□□□□ 0.46
LMNA-208ENST00000448611 STXBP5Q5T5C0 1151 aa17.92■□□□□ 0.46
LMNA-208ENST00000448611 TXNDC8Q6A555 127 aa17.92■□□□□ 0.46
LMNA-208ENST00000448611 IL31Q6EBC2 164 aa17.92■□□□□ 0.46
LMNA-208ENST00000448611 ALG1LQ6GMV1 187 aa17.92■□□□□ 0.46
LMNA-208ENST00000448611 FSTL4Q6MZW2 842 aa17.92■□□□□ 0.46
LMNA-208ENST00000448611 HERC6Q8IVU3 1022 aa17.92■□□□□ 0.46
LMNA-208ENST00000448611 CNTN4Q8IWV2 1026 aa17.92■□□□□ 0.46
LMNA-208ENST00000448611 SLC25A41Q8N5S1 370 aa17.92■□□□□ 0.46
LMNA-208ENST00000448611 ARL14EPQ8N8R7 260 aaPredicted RBP17.92■□□□□ 0.46
LMNA-208ENST00000448611 CCDC63Q8NA47 563 aa17.92■□□□□ 0.46
LMNA-208ENST00000448611 ARMC2Q8NEN0 867 aa17.92■□□□□ 0.46
LMNA-208ENST00000448611 RANBP9Q96S59 729 aa17.92■□□□□ 0.46
LMNA-208ENST00000448611 SEMA3CQ99985 751 aa17.92■□□□□ 0.46
LMNA-208ENST00000448611 LBHD1Q9BQE6 289 aaPredicted RBP17.92■□□□□ 0.46
LMNA-208ENST00000448611 ZBED2Q9BTP6 218 aa17.92■□□□□ 0.46
LMNA-208ENST00000448611 LRRC3Q9BY71 257 aa17.92■□□□□ 0.46
LMNA-208ENST00000448611 SLC2A6Q9UGQ3 507 aa17.92■□□□□ 0.46
LMNA-208ENST00000448611 OBSL1O75147 1896 aa17.92■□□□□ 0.46
LMNA-208ENST00000448611 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.92■□□□□ 0.46
LMNA-208ENST00000448611 KLF11O14901 512 aa17.92■□□□□ 0.46
LMNA-208ENST00000448611 CXCL14O95715 111 aa17.92■□□□□ 0.46
LMNA-208ENST00000448611 RHOCP08134 193 aa17.92■□□□□ 0.46
LMNA-208ENST00000448611 SERPINH1P50454 418 aaKnown RBP17.92■□□□□ 0.46
LMNA-208ENST00000448611 GAREM2Q75VX8 874 aa17.92■□□□□ 0.46
LMNA-208ENST00000448611 SPON2Q9BUD6 331 aa17.92■□□□□ 0.46
LMNA-208ENST00000448611 ACE2Q9BYF1 805 aaPredicted RBP17.92■□□□□ 0.46
LMNA-208ENST00000448611 PRKD2Q9BZL6 878 aa17.92■□□□□ 0.46
LMNA-208ENST00000448611 KDM4CQ9H3R0 1056 aa17.92■□□□□ 0.46
LMNA-208ENST00000448611 SNX15Q9NRS6 342 aa17.92■□□□□ 0.46
LMNA-208ENST00000448611 NSMCE4AQ9NXX6 385 aa17.92■□□□□ 0.46
LMNA-208ENST00000448611 MTO1Q9Y2Z2 717 aaKnown RBP17.92■□□□□ 0.46
LMNA-208ENST00000448611 ACTL7AQ9Y615 435 aa17.92■□□□□ 0.46
LMNA-208ENST00000448611 MYO1CO00159 1063 aa17.91■□□□□ 0.46
LMNA-208ENST00000448611 TIMM44O43615 452 aa17.91■□□□□ 0.46
LMNA-208ENST00000448611 GLRA3O75311 464 aa17.91■□□□□ 0.46
LMNA-208ENST00000448611 VAPBO95292 243 aa17.91■□□□□ 0.46
LMNA-208ENST00000448611 ATXN1LP0C7T5 689 aaKnown RBP17.91■□□□□ 0.46
LMNA-208ENST00000448611 HDCP19113 662 aa17.91■□□□□ 0.46
LMNA-208ENST00000448611 BGNP21810 368 aa17.91■□□□□ 0.46
LMNA-208ENST00000448611 GLDCP23378 1020 aa17.91■□□□□ 0.46
LMNA-208ENST00000448611 TYK2P29597 1187 aa17.91■□□□□ 0.46
LMNA-208ENST00000448611 OXCT1P55809 520 aa17.91■□□□□ 0.46
LMNA-208ENST00000448611 CNGA3Q16281 694 aa17.91■□□□□ 0.46
LMNA-208ENST00000448611 SPRED3Q2MJR0 410 aa17.91■□□□□ 0.46
LMNA-208ENST00000448611 PPM1JQ5JR12 505 aa17.91■□□□□ 0.46
LMNA-208ENST00000448611 KIAA0930Q6ICG6 404 aaPredicted RBP17.91■□□□□ 0.46
LMNA-208ENST00000448611 CXorf57Q6NSI4 855 aaKnown RBP17.91■□□□□ 0.46
LMNA-208ENST00000448611 KYAT3Q6YP21 454 aaKnown RBP17.91■□□□□ 0.46
LMNA-208ENST00000448611 Q6ZNB5 142 aa17.91■□□□□ 0.46
LMNA-208ENST00000448611 TRPM8Q7Z2W7 1104 aa17.91■□□□□ 0.46
LMNA-208ENST00000448611 TMC7Q7Z402 723 aa17.91■□□□□ 0.46
LMNA-208ENST00000448611 TMC8Q8IU68 726 aa17.91■□□□□ 0.46
LMNA-208ENST00000448611 ATP2A3Q93084 1043 aa17.91■□□□□ 0.46
LMNA-208ENST00000448611 MGME1Q9BQP7 344 aa17.91■□□□□ 0.46
LMNA-208ENST00000448611 SIRPGQ9P1W8 387 aa17.91■□□□□ 0.46
LMNA-208ENST00000448611 EMCNQ9ULC0 261 aa17.91■□□□□ 0.46
LMNA-208ENST00000448611 HEATR9A2RTY3 570 aa17.9■□□□□ 0.46
LMNA-208ENST00000448611 GFRA2O00451 464 aa17.9■□□□□ 0.46
LMNA-208ENST00000448611 SIN3BO75182 1162 aa17.9■□□□□ 0.46
LMNA-208ENST00000448611 GABRR2P28476 465 aa17.9■□□□□ 0.46
LMNA-208ENST00000448611 ABCG1P45844 678 aa17.9■□□□□ 0.46
LMNA-208ENST00000448611 SERPINB8P50452 374 aa17.9■□□□□ 0.46
LMNA-208ENST00000448611 LACTB2Q53H82 288 aaPredicted RBP17.9■□□□□ 0.46
LMNA-208ENST00000448611 SIRPB2Q5JXA9 342 aa17.9■□□□□ 0.46
LMNA-208ENST00000448611 TMEM240Q5SV17 173 aa17.9■□□□□ 0.46
LMNA-208ENST00000448611 CMC1Q7Z7K0 106 aa17.9■□□□□ 0.46
LMNA-208ENST00000448611 SP7Q8TDD2 431 aaPredicted RBP17.9■□□□□ 0.46
LMNA-208ENST00000448611 ATXN7L3BQ96GX2 97 aa17.9■□□□□ 0.46
LMNA-208ENST00000448611 VPS39Q96JC1 886 aa17.9■□□□□ 0.46
LMNA-208ENST00000448611 PSKH2Q96QS6 385 aa17.9■□□□□ 0.46
LMNA-208ENST00000448611 PLCD4Q9BRC7 762 aa17.9■□□□□ 0.46
LMNA-208ENST00000448611 MECRQ9BV79 373 aa17.9■□□□□ 0.46
LMNA-208ENST00000448611 UBA2Q9UBT2 640 aaPredicted RBP17.9■□□□□ 0.46
LMNA-208ENST00000448611 SEPT3Q9UH03 358 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms