RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 NDNQ99608 321 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 SNRNP25Q9BV90 132 aaKnown RBP7.86□□□□□ -1.15
NEDD9-204ENST00000448183 MAN1C1Q9NR34 630 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 ATXN10Q9UBB4 475 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 TMCO1Q9UM00 188 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 DMTF1Q9Y222 760 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 TMA7Q9Y2S6 64 aaKnown RBP7.86□□□□□ -1.15
NEDD9-204ENST00000448183 ASTN1O14525 1302 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 hCG_1818297A0A087WSY0 165 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 FGF10O15520 208 aaPredicted RBP7.86□□□□□ -1.15
NEDD9-204ENST00000448183 ANXA5P08758 320 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 HGFP14210 728 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 IL1R1P14778 569 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 ETS2P15036 469 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 AKAP5P24588 427 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 GRIK4Q16099 956 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 LIPMQ5VYY2 423 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 DENND5AQ6IQ26 1287 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 BORCS5Q969J3 196 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 CCNB1IP1Q9NPC3 277 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 SETD4Q9NVD3 440 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 CMTM6Q9NX76 183 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 IKZF3Q9UKT9 509 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 SLIT1O75093 1534 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 CCDC182A6NF36 153 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 NKRFO15226 690 aaKnown RBP eCLIP7.86□□□□□ -1.15
NEDD9-204ENST00000448183 TRUB2O95900 331 aaKnown RBP7.86□□□□□ -1.15
NEDD9-204ENST00000448183 CATP04040 527 aaKnown RBP7.86□□□□□ -1.15
NEDD9-204ENST00000448183 NTRK1P04629 796 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 TAL1P17542 331 aaPredicted RBP7.86□□□□□ -1.15
NEDD9-204ENST00000448183 EPHA3P29320 983 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 IL12AP29459 219 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 GSTM5P46439 218 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 RAB27AP51159 221 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 GTF2BQ00403 316 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 ZNF846Q147U1 533 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 SKIV2LQ15477 1246 aaKnown RBP7.86□□□□□ -1.15
NEDD9-204ENST00000448183 QPCTQ16769 361 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 ARMC12Q5T9G4 340 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 ZNF549Q6P9A3 640 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 FOXR2Q6PJQ5 311 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 NANOGNBQ7Z5D8 188 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 ALYREFQ86V81 257 aaKnown RBP7.86□□□□□ -1.15
NEDD9-204ENST00000448183 EFCAB3Q8N7B9 438 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 KCTD4Q8WVF5 259 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 HSFY1Q96LI6 401 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 Q96MT0 163 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 PWWP2AQ96N64 755 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 VPS35Q96QK1 796 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 CLN6Q9NWW5 311 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 MORF4L1Q9UBU8 362 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 OR12D3Q9UGF7 316 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 PSMD13Q9UNM6 376 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 ERGIC3Q9Y282 383 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 CLUHO75153 1309 aa7.86□□□□□ -1.15
NEDD9-204ENST00000448183 TCRBV9S1A1TA0A576 114 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 CABYRO75952 493 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 OR6B1O95007 311 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 IGSF6O95976 241 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 FGFR1P11362 822 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 GTF2E2P29084 291 aaKnown RBP7.85□□□□□ -1.15
NEDD9-204ENST00000448183 AXLP30530 894 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 CASP7P55210 303 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 RAB10P61026 200 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 PLCL1Q15111 1095 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 QPRTQ15274 297 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 CYP2A13Q16696 494 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 PAGE2BQ5JRK9 111 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 PMF1Q6P1K2 205 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 GCNT7Q6ZNI0 430 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 IRF2BP2Q7Z5L9 587 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 GATAD2AQ86YP4 633 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 LGI2Q8N0V4 545 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 GSTCDQ8NEC7 633 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 QRFPRQ96P65 431 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 CCDC3Q9BQI4 270 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 ZNF670Q9BS34 389 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 SENP6Q9GZR1 1112 aaPredicted RBP7.85□□□□□ -1.15
NEDD9-204ENST00000448183 SPATC1LQ9H0A9 340 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 TMEM134Q9H6X4 195 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 KCNMB3Q9NPA1 279 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 SNX6Q9UNH7 406 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 REXO2Q9Y3B8 237 aaKnown RBP7.85□□□□□ -1.15
NEDD9-204ENST00000448183 PRR5-ARHGAP8B1AHC4 643 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 TMCC2O75069 709 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 BANF1O75531 89 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 ADRB2P07550 413 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 ZNF37AP17032 561 aaPredicted RBP7.85□□□□□ -1.15
NEDD9-204ENST00000448183 NFKB1P19838 968 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 PSMD4P55036 377 aaKnown RBP7.85□□□□□ -1.15
NEDD9-204ENST00000448183 ARHGAP8P85298 464 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 BCL2L1Q07817 233 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 GNA13Q14344 377 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 LY6KQ17RY6 165 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 SAPCD2Q86UD0 394 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 ZNF410Q86VK4 478 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 ADCY4Q8NFM4 1077 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 MAGEC3Q8TD91 643 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 ALG3Q92685 438 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 REXO5Q96IC2 774 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms