RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 MFSD11O43934 449 aa17.72■□□□□ 0.43
SMARCAL1-209ENST00000444508 FSBPO95073 299 aa17.72■□□□□ 0.43
SMARCAL1-209ENST00000444508 ADPRHP54922 357 aa17.72■□□□□ 0.43
SMARCAL1-209ENST00000444508 PAFAH1B3Q15102 231 aaKnown RBP17.72■□□□□ 0.43
SMARCAL1-209ENST00000444508 CYTH1Q15438 398 aa17.72■□□□□ 0.43
SMARCAL1-209ENST00000444508 TMCO4Q5TGY1 634 aa17.72■□□□□ 0.43
SMARCAL1-209ENST00000444508 NCEH1Q6PIU2 408 aa17.72■□□□□ 0.43
SMARCAL1-209ENST00000444508 CEP76Q8TAP6 659 aa17.72■□□□□ 0.43
SMARCAL1-209ENST00000444508 ARRDC3Q96B67 414 aa17.72■□□□□ 0.43
SMARCAL1-209ENST00000444508 RNF157Q96PX1 679 aa17.72■□□□□ 0.43
SMARCAL1-209ENST00000444508 OSBPL1AQ9BXW6 950 aa17.72■□□□□ 0.43
SMARCAL1-209ENST00000444508 MIR1-1HGQ9H1L0 117 aa17.72■□□□□ 0.43
SMARCAL1-209ENST00000444508 SMOC1Q9H4F8 434 aa17.72■□□□□ 0.43
SMARCAL1-209ENST00000444508 LHX3Q9UBR4 397 aa17.72■□□□□ 0.43
SMARCAL1-209ENST00000444508 TBC1D3DA0A087WVF3 549 aa17.71■□□□□ 0.43
SMARCAL1-209ENST00000444508 TBC1D3IA0A087WXS9 549 aa17.71■□□□□ 0.43
SMARCAL1-209ENST00000444508 TBC1D3EA0A087X179 549 aa17.71■□□□□ 0.43
SMARCAL1-209ENST00000444508 TBC1D3KA0A087X1G2 549 aa17.71■□□□□ 0.43
SMARCAL1-209ENST00000444508 TBC1D3FA6NER0 549 aaPredicted RBP17.71■□□□□ 0.43
SMARCAL1-209ENST00000444508 TBC1D3LB9A6J9 549 aa17.71■□□□□ 0.43
SMARCAL1-209ENST00000444508 KHNYNO15037 678 aaKnown RBP17.71■□□□□ 0.43
SMARCAL1-209ENST00000444508 TBC1D3HP0C7X1 549 aa17.71■□□□□ 0.43
SMARCAL1-209ENST00000444508 GNSP15586 552 aa17.71■□□□□ 0.43
SMARCAL1-209ENST00000444508 TGM1P22735 817 aa17.71■□□□□ 0.43
SMARCAL1-209ENST00000444508 ITGB7P26010 798 aa17.71■□□□□ 0.43
SMARCAL1-209ENST00000444508 RENBPP51606 427 aa17.71■□□□□ 0.43
SMARCAL1-209ENST00000444508 LMNB2Q03252 620 aa17.71■□□□□ 0.43
SMARCAL1-209ENST00000444508 LBRQ14739 615 aaKnown RBP17.71■□□□□ 0.43
SMARCAL1-209ENST00000444508 AGBL4Q5VU57 503 aa17.71■□□□□ 0.43
SMARCAL1-209ENST00000444508 PEAR1Q5VY43 1037 aaPredicted RBP17.71■□□□□ 0.43
SMARCAL1-209ENST00000444508 KIAA0895LQ68EN5 471 aa17.71■□□□□ 0.43
SMARCAL1-209ENST00000444508 TBC1D3GQ6DHY5 549 aa17.71■□□□□ 0.43
SMARCAL1-209ENST00000444508 TBC1D3CQ6IPX1 549 aa17.71■□□□□ 0.43
SMARCAL1-209ENST00000444508 PRR23CQ6ZRP0 262 aa17.71■□□□□ 0.43
SMARCAL1-209ENST00000444508 ERN2Q76MJ5 926 aaKnown RBP17.71■□□□□ 0.43
SMARCAL1-209ENST00000444508 RFX6Q8HWS3 928 aa17.71■□□□□ 0.43
SMARCAL1-209ENST00000444508 TBC1D3Q8IZP1 549 aaPredicted RBP17.71■□□□□ 0.43
SMARCAL1-209ENST00000444508 BBS5Q8N3I7 341 aa17.71■□□□□ 0.43
SMARCAL1-209ENST00000444508 PQLC3Q8N755 202 aa17.71■□□□□ 0.43
SMARCAL1-209ENST00000444508 KIAA1524Q8TCG1 905 aa17.71■□□□□ 0.43
SMARCAL1-209ENST00000444508 ANP32BQ92688 251 aaKnown RBP17.71■□□□□ 0.43
SMARCAL1-209ENST00000444508 FAM131CQ96AQ9 280 aa17.71■□□□□ 0.43
SMARCAL1-209ENST00000444508 RNF25Q96BH1 459 aaPredicted RBP17.71■□□□□ 0.43
SMARCAL1-209ENST00000444508 EXOC2Q96KP1 924 aa17.71■□□□□ 0.43
SMARCAL1-209ENST00000444508 ZNF830Q96NB3 372 aaPredicted RBP17.71■□□□□ 0.43
SMARCAL1-209ENST00000444508 HDAC8Q9BY41 377 aa17.71■□□□□ 0.43
SMARCAL1-209ENST00000444508 KDM4CQ9H3R0 1056 aa17.71■□□□□ 0.43
SMARCAL1-209ENST00000444508 TMEM74BQ9NUR3 256 aa17.71■□□□□ 0.43
SMARCAL1-209ENST00000444508 SEPT3Q9UH03 358 aa17.71■□□□□ 0.43
SMARCAL1-209ENST00000444508 EVLQ9UI08 416 aaPredicted RBP17.71■□□□□ 0.43
SMARCAL1-209ENST00000444508 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.71■□□□□ 0.43
SMARCAL1-209ENST00000444508 MACROD2A1Z1Q3 448 aa17.7■□□□□ 0.42
SMARCAL1-209ENST00000444508 C3orf70A6NLC5 250 aaPredicted RBP17.7■□□□□ 0.42
SMARCAL1-209ENST00000444508 APOL1O14791 398 aa17.7■□□□□ 0.42
SMARCAL1-209ENST00000444508 PLRG1O43660 514 aaKnown RBP17.7■□□□□ 0.42
SMARCAL1-209ENST00000444508 MAFKO60675 156 aa17.7■□□□□ 0.42
SMARCAL1-209ENST00000444508 CFIP05156 583 aa17.7■□□□□ 0.42
SMARCAL1-209ENST00000444508 UGT2B4P06133 528 aa17.7■□□□□ 0.42
SMARCAL1-209ENST00000444508 ZFXP17010 805 aaPredicted RBP17.7■□□□□ 0.42
SMARCAL1-209ENST00000444508 MX2P20592 715 aa17.7■□□□□ 0.42
SMARCAL1-209ENST00000444508 MAOBP27338 520 aa17.7■□□□□ 0.42
SMARCAL1-209ENST00000444508 GKP32189 559 aa17.7■□□□□ 0.42
SMARCAL1-209ENST00000444508 NEK3P51956 506 aa17.7■□□□□ 0.42
SMARCAL1-209ENST00000444508 GALNT2Q10471 571 aa17.7■□□□□ 0.42
SMARCAL1-209ENST00000444508 ZNF235Q14590 738 aa17.7■□□□□ 0.42
SMARCAL1-209ENST00000444508 GRM3Q14832 879 aa17.7■□□□□ 0.42
SMARCAL1-209ENST00000444508 SF3A2Q15428 464 aaKnown RBP17.7■□□□□ 0.42
SMARCAL1-209ENST00000444508 DUOXA1Q1HG43 343 aa17.7■□□□□ 0.42
SMARCAL1-209ENST00000444508 AASDHQ4L235 1098 aaPredicted RBP17.7■□□□□ 0.42
SMARCAL1-209ENST00000444508 ZNF805Q5CZA5 627 aa17.7■□□□□ 0.42
SMARCAL1-209ENST00000444508 TRIM61Q5EBN2 209 aa17.7■□□□□ 0.42
SMARCAL1-209ENST00000444508 FBXL19Q6PCT2 694 aa17.7■□□□□ 0.42
SMARCAL1-209ENST00000444508 GDPD4Q6W3E5 623 aa17.7■□□□□ 0.42
SMARCAL1-209ENST00000444508 LRRC8AQ8IWT6 810 aa17.7■□□□□ 0.42
SMARCAL1-209ENST00000444508 KATNAL2Q8IYT4 538 aa17.7■□□□□ 0.42
SMARCAL1-209ENST00000444508 DNASE2BQ8WZ79 361 aa17.7■□□□□ 0.42
SMARCAL1-209ENST00000444508 BIRC7Q96CA5 298 aa17.7■□□□□ 0.42
SMARCAL1-209ENST00000444508 NUSAP1Q9BXS6 441 aaKnown RBP17.7■□□□□ 0.42
SMARCAL1-209ENST00000444508 TSGA10Q9BZW7 698 aa17.7■□□□□ 0.42
SMARCAL1-209ENST00000444508 EIF2B4Q9UI10 523 aaKnown RBP17.7■□□□□ 0.42
SMARCAL1-209ENST00000444508 TPX2Q9ULW0 747 aaKnown RBP17.7■□□□□ 0.42
SMARCAL1-209ENST00000444508 HSPA9P38646 679 aaKnown RBP17.69■□□□□ 0.42
SMARCAL1-209ENST00000444508 GARSP41250 739 aaKnown RBP17.69■□□□□ 0.42
SMARCAL1-209ENST00000444508 CSNK1DP48730 415 aa17.69■□□□□ 0.42
SMARCAL1-209ENST00000444508 CCR5P51681 352 aa17.69■□□□□ 0.42
SMARCAL1-209ENST00000444508 SLC10A7Q0GE19 358 aa17.69■□□□□ 0.42
SMARCAL1-209ENST00000444508 PIP5KL1Q5T9C9 394 aa17.69■□□□□ 0.42
SMARCAL1-209ENST00000444508 TCEAL6Q6IPX3 200 aa17.69■□□□□ 0.42
SMARCAL1-209ENST00000444508 TIGD7Q6NT04 549 aaPredicted RBP17.69■□□□□ 0.42
SMARCAL1-209ENST00000444508 MFSD7Q6UXD7 560 aa17.69■□□□□ 0.42
SMARCAL1-209ENST00000444508 CCDC50Q8IVM0 306 aa17.69■□□□□ 0.42
SMARCAL1-209ENST00000444508 SYCE1Q8N0S2 351 aa17.69■□□□□ 0.42
SMARCAL1-209ENST00000444508 TSEN2Q8NCE0 465 aaKnown RBP17.69■□□□□ 0.42
SMARCAL1-209ENST00000444508 TCEAL3Q969E4 200 aa17.69■□□□□ 0.42
SMARCAL1-209ENST00000444508 RBM41Q96IZ5 413 aaKnown RBP17.69■□□□□ 0.42
SMARCAL1-209ENST00000444508 KLHL32Q96NJ5 620 aa17.69■□□□□ 0.42
SMARCAL1-209ENST00000444508 CPEB1Q9BZB8 566 aaKnown RBP17.69■□□□□ 0.42
SMARCAL1-209ENST00000444508 PREBQ9HCU5 417 aa17.69■□□□□ 0.42
SMARCAL1-209ENST00000444508 ADGRG1Q9Y653 693 aa17.69■□□□□ 0.42
SMARCAL1-209ENST00000444508 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms