RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 SCGB2A2Q13296 93 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 MTHFSDQ2M296 383 aaKnown RBP4.02□□□□□ -1.77
UBR3-206ENST00000444475 E4F1Q66K89 784 aaPredicted RBP4.02□□□□□ -1.77
UBR3-206ENST00000444475 KLHL35Q6PF15 583 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 KCTD9Q7L273 389 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 STK32CQ86UX6 486 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 PYROXD2Q8N2H3 581 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.02□□□□□ -1.77
UBR3-206ENST00000444475 L3MBTL4Q8NA19 623 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 RCBTB1Q8NDN9 531 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 C17orf47Q8NEP4 570 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 OR8J1Q8NGP2 316 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 ELP5Q8TE02 316 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 SH3RF2Q8TEC5 729 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 THRSPQ92748 146 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 CELF1Q92879 486 aaKnown RBP4.02□□□□□ -1.77
UBR3-206ENST00000444475 AZIN2Q96A70 460 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 MTFMTQ96DP5 389 aaKnown RBP4.02□□□□□ -1.77
UBR3-206ENST00000444475 HES6Q96HZ4 224 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 COQ7Q99807 217 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 DPYSL5Q9BPU6 564 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 PBX4Q9BYU1 374 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 GPR88Q9GZN0 384 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 RASSF4Q9H2L5 321 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 TBC1D13Q9NVG8 400 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 EMC3Q9P0I2 261 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 DBF4Q9UBU7 674 aaPredicted RBP4.02□□□□□ -1.77
UBR3-206ENST00000444475 CA14Q9ULX7 337 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 PTRH2Q9Y3E5 179 aaKnown RBP4.02□□□□□ -1.77
UBR3-206ENST00000444475 PFASO15067 1338 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 TTC37Q6PGP7 1564 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 FAM47DPA6NHR8 397 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 FAM90A7PA6NKC0 464 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 FAM90A22PA8MWA6 464 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 FAM90A12PA8MX19 464 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 FAM90A23PA8MXZ1 464 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 SLC33A1O00400 549 aaPredicted RBP4.02□□□□□ -1.77
UBR3-206ENST00000444475 ATP2A1O14983 1001 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 KRT37O76014 449 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 SLCO2B1O94956 709 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 CXCL14O95715 111 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 EPORP19235 508 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 HOXA13P31271 388 aaPredicted RBP4.02□□□□□ -1.77
UBR3-206ENST00000444475 CARSP49589 748 aaKnown RBP4.02□□□□□ -1.77
UBR3-206ENST00000444475 SESN2P58004 480 aaPredicted RBP4.02□□□□□ -1.77
UBR3-206ENST00000444475 ATP11AP98196 1134 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 VEPH1Q14D04 833 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 BCL7AQ4VC05 210 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 LRRC23Q53EV4 343 aaPredicted RBP4.02□□□□□ -1.77
UBR3-206ENST00000444475 PRRT3Q5FWE3 981 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 TMEM214Q6NUQ4 689 aaKnown RBP4.02□□□□□ -1.77
UBR3-206ENST00000444475 THSD4Q6ZMP0 1018 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 KIF6Q6ZMV9 814 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 FAM90A1Q86YD7 464 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 FAM185AQ8N0U4 392 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 FIBCD1Q8N539 461 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 OR7G3Q8NG95 312 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 EXOC6Q8TAG9 804 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 PIBF1Q8WXW3 757 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 KIFAP3Q92845 792 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 FBXO32Q969P5 355 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 ISG20Q96AZ6 181 aaKnown RBP4.02□□□□□ -1.77
UBR3-206ENST00000444475 WDR83Q9BRX9 315 aaKnown RBP4.02□□□□□ -1.77
UBR3-206ENST00000444475 ZNF577Q9BSK1 485 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 GPATCH2Q9NW75 528 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 PRR13Q9NZ81 148 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 ASH2LQ9UBL3 628 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 SEC63Q9UGP8 760 aaKnown RBP4.02□□□□□ -1.77
UBR3-206ENST00000444475 HMGXB4Q9UGU5 601 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 USP21Q9UK80 565 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 CBY1Q9Y3M2 126 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 KANK1Q14678 1352 aa4.02□□□□□ -1.77
UBR3-206ENST00000444475 LOC102723996A0A087X1L8 192 aa4.01□□□□□ -1.77
UBR3-206ENST00000444475 A0A0U1RQV5 110 aa4.01□□□□□ -1.77
UBR3-206ENST00000444475 MYO1GB0I1T2 1018 aa4.01□□□□□ -1.77
UBR3-206ENST00000444475 H3BUI4 141 aa4.01□□□□□ -1.77
UBR3-206ENST00000444475 TNPO2O14787 897 aaKnown RBP4.01□□□□□ -1.77
UBR3-206ENST00000444475 GSTA4O15217 222 aa4.01□□□□□ -1.77
UBR3-206ENST00000444475 GRM6O15303 877 aa4.01□□□□□ -1.77
UBR3-206ENST00000444475 ABHD16AO95870 558 aa4.01□□□□□ -1.77
UBR3-206ENST00000444475 CSTAP01040 98 aa4.01□□□□□ -1.77
UBR3-206ENST00000444475 CELA3BP08861 270 aa4.01□□□□□ -1.77
UBR3-206ENST00000444475 POU2F1P14859 743 aa4.01□□□□□ -1.77
UBR3-206ENST00000444475 CDC25CP30307 473 aa4.01□□□□□ -1.77
UBR3-206ENST00000444475 GJA4P35212 333 aa4.01□□□□□ -1.77
UBR3-206ENST00000444475 GRK3P35626 688 aa4.01□□□□□ -1.77
UBR3-206ENST00000444475 SLC15A1P46059 708 aa4.01□□□□□ -1.77
UBR3-206ENST00000444475 LIG4P49917 911 aa4.01□□□□□ -1.77
UBR3-206ENST00000444475 GATMP50440 423 aa4.01□□□□□ -1.77
UBR3-206ENST00000444475 TIRAPP58753 221 aa4.01□□□□□ -1.77
UBR3-206ENST00000444475 SRSF5Q13243 272 aaKnown RBP4.01□□□□□ -1.77
UBR3-206ENST00000444475 ZNF484Q5JVG2 852 aa4.01□□□□□ -1.77
UBR3-206ENST00000444475 MTSS1LQ765P7 747 aa4.01□□□□□ -1.77
UBR3-206ENST00000444475 FAM129CQ86XR2 697 aa4.01□□□□□ -1.77
UBR3-206ENST00000444475 MINDY1Q8N5J2 469 aa4.01□□□□□ -1.77
UBR3-206ENST00000444475 SPSB4Q96A44 273 aa4.01□□□□□ -1.77
UBR3-206ENST00000444475 MTRQ99707 1265 aa4.01□□□□□ -1.77
UBR3-206ENST00000444475 MGME1Q9BQP7 344 aa4.01□□□□□ -1.77
UBR3-206ENST00000444475 UPF3BQ9BZI7 483 aaKnown RBP4.01□□□□□ -1.77
UBR3-206ENST00000444475 XYLT2Q9H1B5 865 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms