RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 MAP1BP46821 2468 aaKnown RBP20.42■□□□□ 0.86
LRCH3-208ENST00000443727 C1QTNF9BB2RNN3 333 aa20.41■□□□□ 0.86
LRCH3-208ENST00000443727 EIF3CLB5ME19 914 aaKnown RBP20.41■□□□□ 0.86
LRCH3-208ENST00000443727 EEF2KO00418 725 aaKnown RBP20.41■□□□□ 0.86
LRCH3-208ENST00000443727 NEMP1O14524 444 aa20.41■□□□□ 0.86
LRCH3-208ENST00000443727 TMCC1O94876 653 aa20.41■□□□□ 0.86
LRCH3-208ENST00000443727 POP4O95707 220 aaKnown RBP20.41■□□□□ 0.86
LRCH3-208ENST00000443727 C1QTNF9P0C862 333 aa20.41■□□□□ 0.86
LRCH3-208ENST00000443727 GKP32189 559 aa20.41■□□□□ 0.86
LRCH3-208ENST00000443727 RHOAP61586 193 aa20.41■□□□□ 0.86
LRCH3-208ENST00000443727 RAD51Q06609 339 aa20.41■□□□□ 0.86
LRCH3-208ENST00000443727 MAPK8IP2Q13387 824 aaPredicted RBP20.41■□□□□ 0.86
LRCH3-208ENST00000443727 SKOR2Q2VWA4 1001 aaPredicted RBP20.41■□□□□ 0.86
LRCH3-208ENST00000443727 ZNF284Q2VY69 593 aa20.41■□□□□ 0.86
LRCH3-208ENST00000443727 MYLK3Q32MK0 819 aa20.41■□□□□ 0.86
LRCH3-208ENST00000443727 CCDC157Q569K6 752 aa20.41■□□□□ 0.86
LRCH3-208ENST00000443727 ATXN7L2Q5T6C5 722 aaPredicted RBP20.41■□□□□ 0.86
LRCH3-208ENST00000443727 ERMARDQ5T6L9 678 aa20.41■□□□□ 0.86
LRCH3-208ENST00000443727 RAB44Q7Z6P3 723 aaPredicted RBP20.41■□□□□ 0.86
LRCH3-208ENST00000443727 BAHD1Q8TBE0 780 aaPredicted RBP20.41■□□□□ 0.86
LRCH3-208ENST00000443727 CASKIN2Q8WXE0 1202 aa20.41■□□□□ 0.86
LRCH3-208ENST00000443727 IQCDQ96DY2 449 aa20.41■□□□□ 0.86
LRCH3-208ENST00000443727 KLHDC7BQ96G42 594 aa20.41■□□□□ 0.86
LRCH3-208ENST00000443727 FEM1CQ96JP0 617 aa20.41■□□□□ 0.86
LRCH3-208ENST00000443727 EIF3CQ99613 913 aaKnown RBP20.41■□□□□ 0.86
LRCH3-208ENST00000443727 TRIM7Q9C029 511 aa20.41■□□□□ 0.86
LRCH3-208ENST00000443727 NOL6Q9H6R4 1146 aaKnown RBP20.41■□□□□ 0.86
LRCH3-208ENST00000443727 ERVMER34-1Q9H9K5 563 aa20.41■□□□□ 0.86
LRCH3-208ENST00000443727 FTSJ1Q9UET6 329 aa20.41■□□□□ 0.86
LRCH3-208ENST00000443727 WASH4PA8MWX3 477 aa20.4■□□□□ 0.86
LRCH3-208ENST00000443727 TNFSF14O43557 240 aa20.4■□□□□ 0.86
LRCH3-208ENST00000443727 IGSF6O95976 241 aa20.4■□□□□ 0.86
LRCH3-208ENST00000443727 UGT2B4P06133 528 aa20.4■□□□□ 0.86
LRCH3-208ENST00000443727 ATXN1LP0C7T5 689 aaKnown RBP20.4■□□□□ 0.86
LRCH3-208ENST00000443727 RPS21P63220 83 aaKnown RBP20.4■□□□□ 0.86
LRCH3-208ENST00000443727 ZBED6P86452 979 aa20.4■□□□□ 0.86
LRCH3-208ENST00000443727 SERINC3Q13530 473 aa20.4■□□□□ 0.86
LRCH3-208ENST00000443727 ZNF805Q5CZA5 627 aa20.4■□□□□ 0.86
LRCH3-208ENST00000443727 PPP6R3Q5H9R7 873 aaPredicted RBP20.4■□□□□ 0.86
LRCH3-208ENST00000443727 SEL1L3Q68CR1 1132 aa20.4■□□□□ 0.86
LRCH3-208ENST00000443727 PARS2Q7L3T8 475 aaKnown RBP20.4■□□□□ 0.86
LRCH3-208ENST00000443727 SLCO6A1Q86UG4 719 aa20.4■□□□□ 0.86
LRCH3-208ENST00000443727 UMODL1-AS1Q8N2C9 162 aa20.4■□□□□ 0.86
LRCH3-208ENST00000443727 FNIP1Q8TF40 1166 aa20.4■□□□□ 0.86
LRCH3-208ENST00000443727 ADAMTS14Q8WXS8 1223 aa20.4■□□□□ 0.86
LRCH3-208ENST00000443727 SYN2Q92777 582 aaPredicted RBP20.4■□□□□ 0.86
LRCH3-208ENST00000443727 NCAPGQ9BPX3 1015 aa20.4■□□□□ 0.86
LRCH3-208ENST00000443727 OSBPL1AQ9BXW6 950 aa20.4■□□□□ 0.86
LRCH3-208ENST00000443727 FZD3Q9NPG1 666 aa20.4■□□□□ 0.86
LRCH3-208ENST00000443727 IFNKQ9P0W0 207 aa20.4■□□□□ 0.86
LRCH3-208ENST00000443727 LUC7L2Q9Y383 392 aaKnown RBP20.4■□□□□ 0.86
LRCH3-208ENST00000443727 MSRB2Q9Y3D2 182 aa20.4■□□□□ 0.86
LRCH3-208ENST00000443727 TMEM131Q92545 1883 aa20.39■□□□□ 0.86
LRCH3-208ENST00000443727 C16orf96A6NNT2 1141 aa20.39■□□□□ 0.85
LRCH3-208ENST00000443727 SERPING1P05155 500 aa20.39■□□□□ 0.85
LRCH3-208ENST00000443727 TPM3P06753 285 aa20.39■□□□□ 0.85
LRCH3-208ENST00000443727 PROS1P07225 676 aa20.39■□□□□ 0.85
LRCH3-208ENST00000443727 HNRNPA2B1P22626 353 aaKnown RBP20.39■□□□□ 0.85
LRCH3-208ENST00000443727 MIPP30301 263 aa20.39■□□□□ 0.85
LRCH3-208ENST00000443727 NFKBIBQ15653 356 aa20.39■□□□□ 0.85
LRCH3-208ENST00000443727 CA9Q16790 459 aa20.39■□□□□ 0.85
LRCH3-208ENST00000443727 KIAA1161Q6NSJ0 714 aa20.39■□□□□ 0.85
LRCH3-208ENST00000443727 SPATS2Q86XZ4 545 aaKnown RBP20.39■□□□□ 0.85
LRCH3-208ENST00000443727 SNRNP25Q9BV90 132 aaKnown RBP20.39■□□□□ 0.85
LRCH3-208ENST00000443727 KLC2Q9H0B6 622 aa20.39■□□□□ 0.85
LRCH3-208ENST00000443727 ISCUQ9H1K1 167 aa20.39■□□□□ 0.85
LRCH3-208ENST00000443727 ZFR2Q9UPR6 939 aaKnown RBP20.39■□□□□ 0.85
LRCH3-208ENST00000443727 FADS3Q9Y5Q0 445 aa20.39■□□□□ 0.85
LRCH3-208ENST00000443727 THEGLP0DJG4 465 aa20.38■□□□□ 0.85
LRCH3-208ENST00000443727 EPHA8P29322 1005 aaPredicted RBP20.38■□□□□ 0.85
LRCH3-208ENST00000443727 PBX1P40424 430 aa20.38■□□□□ 0.85
LRCH3-208ENST00000443727 NDST2P52849 883 aa20.38■□□□□ 0.85
LRCH3-208ENST00000443727 SGCGQ13326 291 aa20.38■□□□□ 0.85
LRCH3-208ENST00000443727 SHBQ15464 509 aa20.38■□□□□ 0.85
LRCH3-208ENST00000443727 INO80DQ53TQ3 878 aaPredicted RBP20.38■□□□□ 0.85
LRCH3-208ENST00000443727 GDPD4Q6W3E5 623 aa20.38■□□□□ 0.85
LRCH3-208ENST00000443727 ARFGAP1Q8N6T3 406 aa20.38■□□□□ 0.85
LRCH3-208ENST00000443727 TMEM145Q8NBT3 493 aa20.38■□□□□ 0.85
LRCH3-208ENST00000443727 NETO2Q8NC67 525 aa20.38■□□□□ 0.85
LRCH3-208ENST00000443727 SAP25Q8TEE9 199 aa20.38■□□□□ 0.85
LRCH3-208ENST00000443727 RAB7BQ96AH8 199 aa20.38■□□□□ 0.85
LRCH3-208ENST00000443727 CELF6Q96J87 481 aaKnown RBP20.38■□□□□ 0.85
LRCH3-208ENST00000443727 KLHL32Q96NJ5 620 aa20.38■□□□□ 0.85
LRCH3-208ENST00000443727 PEBP4Q96S96 227 aa20.38■□□□□ 0.85
LRCH3-208ENST00000443727 KCTD15Q96SI1 283 aaPredicted RBP20.38■□□□□ 0.85
LRCH3-208ENST00000443727 SLC17A9Q9BYT1 436 aa20.38■□□□□ 0.85
LRCH3-208ENST00000443727 UBA2Q9UBT2 640 aaPredicted RBP20.38■□□□□ 0.85
LRCH3-208ENST00000443727 CAPN11Q9UMQ6 739 aa20.38■□□□□ 0.85
LRCH3-208ENST00000443727 ARHGAP42A6NI28 874 aa20.37■□□□□ 0.85
LRCH3-208ENST00000443727 TSPAN6O43657 245 aa20.37■□□□□ 0.85
LRCH3-208ENST00000443727 AP1G1O43747 822 aa20.37■□□□□ 0.85
LRCH3-208ENST00000443727 RXRGP48443 463 aa20.37■□□□□ 0.85
LRCH3-208ENST00000443727 TMEM259Q4ZIN3 620 aa20.37■□□□□ 0.85
LRCH3-208ENST00000443727 HGSNATQ68CP4 663 aa20.37■□□□□ 0.85
LRCH3-208ENST00000443727 RFX8Q6ZV50 586 aa20.37■□□□□ 0.85
LRCH3-208ENST00000443727 PSTKQ8IV42 348 aaKnown RBP20.37■□□□□ 0.85
LRCH3-208ENST00000443727 EID2Q8N6I1 236 aa20.37■□□□□ 0.85
LRCH3-208ENST00000443727 ARHGEF26Q96DR7 871 aa20.37■□□□□ 0.85
LRCH3-208ENST00000443727 CALN1Q9BXU9 219 aa20.37■□□□□ 0.85
LRCH3-208ENST00000443727 CACNA1BQ00975 2339 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms