RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 MYL2P10916 166 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 RARGP13631 454 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 ZNF182P17025 639 aaPredicted RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 NPR3P17342 541 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 GAP43P17677 238 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 SPINK2P20155 84 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 F8A1P23610 371 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 HOXA13P31271 388 aaPredicted RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 RPL9P32969 192 aaKnown RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 SEPHS1P49903 392 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 SLC26A2P50443 739 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 ATXN3P54252 364 aaPredicted RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 MFAP3P55082 362 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 CDH15P55291 814 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 DEFA1P59665 94 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 DEFA3P59666 94 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 RACK1P63244 317 aaKnown RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 CDK16Q00536 496 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 COASYQ13057 564 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 PDIA2Q13087 525 aaKnown RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 NR1H3Q13133 447 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 HNRNPDQ14103 355 aaKnown RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 DHX34Q14147 1143 aaKnown RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 TTLL4Q14679 1199 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 HERC3Q15034 1050 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 ZMYND11Q15326 602 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 TAF5Q15542 800 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 TSC22D1Q15714 1073 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 ASIC2Q16515 512 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 CCNG2Q16589 344 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 GPATCH4Q5T3I0 446 aaKnown RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 LDLRAD1Q5T700 205 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 MEI1Q5TIA1 1274 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 FBXL19Q6PCT2 694 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 C17orf99Q6UX52 265 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 ANGPTL8Q6UXH0 198 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 ARHGAP36Q6ZRI8 547 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 TRMT10CQ7L0Y3 403 aaKnown RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 HDDC2Q7Z4H3 204 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 GPR180Q86V85 440 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 AMIGO1Q86WK6 493 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 ARMC8Q8IUR7 673 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 DIS3L2Q8IYB7 885 aaKnown RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 PQLC1Q8N2U9 271 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 AFG1LQ8WV93 481 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 PHKBQ93100 1093 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 INTS12Q96CB8 462 aaKnown RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 C18orf8Q96DM3 657 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 SAMD11Q96NU1 681 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 PYM1Q9BRP8 204 aaKnown RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 HOXD1Q9GZZ0 328 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 RBM38Q9H0Z9 239 aaKnown RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 GHITMQ9H3K2 345 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 CDC42EP4Q9H3Q1 356 aaKnown RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 TLE6Q9H808 572 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 PPCSQ9HAB8 311 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 LRRC4CQ9HCJ2 640 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 ENTPD7Q9NQZ7 604 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 ARHGAP20Q9P2F6 1191 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 CPNE7Q9UBL6 633 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 TNFRSF10DQ9UBN6 386 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 TAGLN3Q9UI15 199 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 TRMT6Q9UJA5 497 aaKnown RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 NDRG2Q9UN36 371 aaKnown RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 ZNF175Q9Y473 711 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 KCNE2Q9Y6J6 123 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 SLX4Q8IY92 1834 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 SVILO95425 2214 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 PFASO15067 1338 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 MAST3O60307 1309 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 MYH11P35749 1972 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 USP17L15C9J2P7 530 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 USP17L13C9JLJ4 530 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 USP17L11C9JVI0 530 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 USP17L18D6R9N7 530 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 USP17L22D6RA61 530 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 USP17L17D6RBQ6 530 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 USP17L19D6RCP7 530 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 USP17L20D6RJB6 530 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 SCAMP3O14828 347 aaKnown RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 PLD2O14939 933 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 NUPL2O15504 423 aaKnown RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 CFLARO15519 480 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 BUD23O43709 281 aaKnown RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 JRKO75564 520 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 SULT1C4O75897 302 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 INMTO95050 263 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 H6PDO95479 791 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 PDGFBP01127 241 aaPredicted RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 PROS1P07225 676 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 HEXBP07686 556 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 RETP07949 1114 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 TRIM49P0CI25 452 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 TRIM49CP0CI26 452 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 KITP10721 976 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 ICAM2P13598 275 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 ITGA2P17301 1181 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 MMP8P22894 467 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 ITGB8P26012 769 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 CTNNA2P26232 953 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms