RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 PLD4Q96BZ4 506 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 ASIC4Q96FT7 647 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 MSANTD3Q96H12 275 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 SLC22A12Q96S37 553 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 MYOCQ99972 504 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 VRTNQ9H8Y1 702 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 SAMD15Q9P1V8 674 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 SHOC2Q9UQ13 582 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 TRIP11Q15643 1979 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 ASXL3Q9C0F0 2248 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 LRRD1A4D1F6 860 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 LIN7AO14910 233 aaPredicted RBP7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 BANF1O75531 89 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 BEST1O76090 585 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 STK10O94804 968 aaKnown RBP7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 TMEM63AO94886 807 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 APBB3O95704 486 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 LSM8O95777 96 aaKnown RBP7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 MAGEA3P43357 314 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 MAGEA6P43360 314 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 SLC18A2Q05940 514 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 CALCOCO2Q13137 446 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 EFTUD2Q15029 972 aaKnown RBP eCLIP7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 FAM46CQ5VWP2 391 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 KAZNQ674X7 775 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 CYP2U1Q7Z449 544 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 ZDHHC17Q8IUH5 632 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 CCDC89Q8N998 374 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 RLN3Q8WXF3 142 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 RTP4Q96DX8 246 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 KLHL14Q9P2G3 628 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 SLC24A2Q9UI40 661 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 CDV3Q9UKY7 258 aaKnown RBP7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 GOLGA4Q13439 2230 aaKnown RBP7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 H3BRJ5 948 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 LZTS3O60299 673 aaPredicted RBP7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 RPP40O75818 363 aaKnown RBP7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 SUN1O94901 812 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 TPBGLP0DKB5 382 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 MAPK8P45983 427 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 ADGRF1Q5T601 910 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 FBXL19Q6PCT2 694 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 FAM13CQ8NE31 585 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 OR14C36Q8NHC7 312 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 GDAP1Q8TB36 358 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 ZNF398Q8TD17 642 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 FAM172AQ8WUF8 416 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 TRMT2BQ96GJ1 504 aaKnown RBP7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 PCDH9Q9HC56 1237 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 PHTF1Q9UMS5 762 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 CYP8B1Q9UNU6 501 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 ZFHX2Q9C0A1 2572 aaPredicted RBP7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 H0YHG0 523 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 VIMP08670 466 aaKnown RBP7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 PABPC1P11940 636 aaKnown RBP7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 AOC1P19801 751 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 NTSR1P30989 418 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 TEAD4Q15561 434 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 TRIP4Q15650 581 aaPredicted RBP7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 RFX6Q8HWS3 928 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 CRIPAKQ8N1N5 446 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 GRIN3AQ8TCU5 1115 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 FNIP1Q8TF40 1166 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 BTN2A3PQ96KV6 586 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 NUSAP1Q9BXS6 441 aaKnown RBP7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 FAM124BQ9H5Z6 455 aaPredicted RBP7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 PNPLA8Q9NP80 782 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 OBP2AQ9NY56 170 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 HMX2A2RU54 273 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 EEF2KO00418 725 aaKnown RBP7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 RAMP2O60895 175 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 LRCH4O75427 683 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 IL4RP24394 825 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 TARSP26639 723 aaKnown RBP7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 ATP5DP30049 168 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 RHOAP61586 193 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 RPS24P62847 133 aaKnown RBP7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 DYNLT1P63172 113 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 INCA1Q0VD86 236 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 KCNJ11Q14654 390 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 TMCO4Q5TGY1 634 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 MBLAC2Q68D91 279 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 ATG14Q6ZNE5 492 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 ARHGEF18Q6ZSZ5 1173 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 FAM183BPQ6ZVS7 135 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 SRRM1Q8IYB3 904 aaKnown RBP7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 BBOF1Q8ND07 529 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 WFIKKN2Q8TEU8 576 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 CYB5D2Q8WUJ1 264 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 OR8D1Q8WZ84 308 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 IRGQQ8WZA9 623 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 CHFRQ96EP1 664 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 PRR11Q96HE9 360 aaPredicted RBP7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 RPL10LQ96L21 214 aaKnown RBP7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 PLCD4Q9BRC7 762 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 NMUR1Q9HB89 426 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 ASIC3Q9UHC3 531 aa7.5□□□□□ -1.21
CDC42BPA-208ENST00000442054 RPL26L1Q9UNX3 145 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms