RNA–Protein interactions for RNA: ENST00000441998.5

NELFE-205, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 5

Gene NELFE, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-205ENST00000441998 CPEB1Q9BZB8 566 aaKnown RBP11.34□□□□□ -0.59
NELFE-205ENST00000441998 RAB6CQ9H0N0 254 aa11.34□□□□□ -0.59
NELFE-205ENST00000441998 ISCUQ9H1K1 167 aa11.34□□□□□ -0.59
NELFE-205ENST00000441998 TNKS2Q9H2K2 1166 aa11.34□□□□□ -0.59
NELFE-205ENST00000441998 NDFIP2Q9NV92 336 aa11.34□□□□□ -0.59
NELFE-205ENST00000441998 TOR4AQ9NXH8 423 aa11.34□□□□□ -0.59
NELFE-205ENST00000441998 DKK3Q9UBP4 350 aa11.34□□□□□ -0.59
NELFE-205ENST00000441998 FADS3Q9Y5Q0 445 aa11.34□□□□□ -0.59
NELFE-205ENST00000441998 KMT2BQ9UMN6 2715 aaPredicted RBP11.34□□□□□ -0.59
NELFE-205ENST00000441998 MAP1BP46821 2468 aaKnown RBP11.33□□□□□ -0.6
NELFE-205ENST00000441998 WNT9AO14904 365 aa11.33□□□□□ -0.6
NELFE-205ENST00000441998 BUB1O43683 1085 aa11.33□□□□□ -0.6
NELFE-205ENST00000441998 PCDH8O95206 1070 aa11.33□□□□□ -0.6
NELFE-205ENST00000441998 GJB6O95452 261 aa11.33□□□□□ -0.6
NELFE-205ENST00000441998 PSMA2P25787 234 aa11.33□□□□□ -0.6
NELFE-205ENST00000441998 PBX1P40424 430 aa11.33□□□□□ -0.6
NELFE-205ENST00000441998 CSNK1DP48730 415 aa11.33□□□□□ -0.6
NELFE-205ENST00000441998 DNA2P51530 1060 aa11.33□□□□□ -0.6
NELFE-205ENST00000441998 SHBQ15464 509 aa11.33□□□□□ -0.6
NELFE-205ENST00000441998 SMAD1Q15797 465 aaKnown RBP11.33□□□□□ -0.6
NELFE-205ENST00000441998 BOLA3Q53S33 107 aa11.33□□□□□ -0.6
NELFE-205ENST00000441998 TMCO4Q5TGY1 634 aa11.33□□□□□ -0.6
NELFE-205ENST00000441998 ZNF571Q7Z3V5 609 aaPredicted RBP11.33□□□□□ -0.6
NELFE-205ENST00000441998 ABI3BPQ7Z7G0 1075 aa11.33□□□□□ -0.6
NELFE-205ENST00000441998 SPATS2Q86XZ4 545 aaKnown RBP11.33□□□□□ -0.6
NELFE-205ENST00000441998 LZTR1Q8N653 840 aa11.33□□□□□ -0.6
NELFE-205ENST00000441998 DENND6BQ8NEG7 585 aa11.33□□□□□ -0.6
NELFE-205ENST00000441998 GRIN3AQ8TCU5 1115 aa11.33□□□□□ -0.6
NELFE-205ENST00000441998 GDAP1L1Q96MZ0 367 aa11.33□□□□□ -0.6
NELFE-205ENST00000441998 C1QTNF2Q9BXJ5 285 aa11.33□□□□□ -0.6
NELFE-205ENST00000441998 NOL6Q9H6R4 1146 aaKnown RBP11.33□□□□□ -0.6
NELFE-205ENST00000441998 TAS2R14Q9NYV8 317 aa11.33□□□□□ -0.6
NELFE-205ENST00000441998 DKK4Q9UBT3 224 aa11.33□□□□□ -0.6
NELFE-205ENST00000441998 FTSJ1Q9UET6 329 aa11.33□□□□□ -0.6
NELFE-205ENST00000441998 KLK13Q9UKR3 277 aa11.33□□□□□ -0.6
NELFE-205ENST00000441998 FCF1Q9Y324 198 aaKnown RBP11.33□□□□□ -0.6
NELFE-205ENST00000441998 USP24Q9UPU5 2620 aa11.33□□□□□ -0.6
NELFE-205ENST00000441998 C16orf96A6NNT2 1141 aa11.32□□□□□ -0.6
NELFE-205ENST00000441998 C1QTNF9BB2RNN3 333 aa11.32□□□□□ -0.6
NELFE-205ENST00000441998 RASA4BC9J798 803 aa11.32□□□□□ -0.6
NELFE-205ENST00000441998 PLK4O00444 970 aa11.32□□□□□ -0.6
NELFE-205ENST00000441998 DDX3XO00571 662 aaKnown RBP eCLIP11.32□□□□□ -0.64e-20■■■■■ 76.5
NELFE-205ENST00000441998 KCNK3O14649 394 aa11.32□□□□□ -0.6
NELFE-205ENST00000441998 AREL1O15033 823 aa11.32□□□□□ -0.6
NELFE-205ENST00000441998 RASA4O43374 803 aa11.32□□□□□ -0.6
NELFE-205ENST00000441998 CREB3O43889 395 aa11.32□□□□□ -0.6
NELFE-205ENST00000441998 PRPSAP2O60256 369 aa11.32□□□□□ -0.6
NELFE-205ENST00000441998 LDOC1O95751 146 aaPredicted RBP11.32□□□□□ -0.6
NELFE-205ENST00000441998 IGSF6O95976 241 aa11.32□□□□□ -0.6
NELFE-205ENST00000441998 TOP3BO95985 862 aaKnown RBP11.32□□□□□ -0.6
NELFE-205ENST00000441998 CAPNS1P04632 268 aa11.32□□□□□ -0.6
NELFE-205ENST00000441998 ATXN1LP0C7T5 689 aaKnown RBP11.32□□□□□ -0.6
NELFE-205ENST00000441998 C1QTNF9P0C862 333 aa11.32□□□□□ -0.6
NELFE-205ENST00000441998 THEGLP0DJG4 465 aa11.32□□□□□ -0.6
NELFE-205ENST00000441998 MAT2AP31153 395 aaKnown RBP11.32□□□□□ -0.6
NELFE-205ENST00000441998 RABIFP47224 123 aa11.32□□□□□ -0.6
NELFE-205ENST00000441998 NUMBP49757 651 aa11.32□□□□□ -0.6
NELFE-205ENST00000441998 UBASH3AP57075 661 aa11.32□□□□□ -0.6
NELFE-205ENST00000441998 TPI1P60174 286 aa11.32□□□□□ -0.6
NELFE-205ENST00000441998 ZBED6P86452 979 aa11.32□□□□□ -0.6
NELFE-205ENST00000441998 FANCCQ00597 558 aa11.32□□□□□ -0.6
NELFE-205ENST00000441998 OGDHQ02218 1023 aa11.32□□□□□ -0.6
NELFE-205ENST00000441998 NSUN2Q08J23 767 aaKnown RBP eCLIP11.32□□□□□ -0.6
NELFE-205ENST00000441998 SGCGQ13326 291 aa11.32□□□□□ -0.6
NELFE-205ENST00000441998 RFTN1Q14699 578 aaPredicted RBP11.32□□□□□ -0.6
NELFE-205ENST00000441998 POM121L1PQ3SYA9 428 aa11.32□□□□□ -0.6
NELFE-205ENST00000441998 LAYNQ6UX15 382 aa11.32□□□□□ -0.6
NELFE-205ENST00000441998 GDPD4Q6W3E5 623 aa11.32□□□□□ -0.6
NELFE-205ENST00000441998 KANSL1Q7Z3B3 1105 aa11.32□□□□□ -0.6
NELFE-205ENST00000441998 TMPRSS12Q86WS5 348 aa11.32□□□□□ -0.6
NELFE-205ENST00000441998 TSC1Q92574 1164 aa11.32□□□□□ -0.6
NELFE-205ENST00000441998 ZNF641Q96N77 438 aaPredicted RBP11.32□□□□□ -0.6
NELFE-205ENST00000441998 TUBGCP5Q96RT8 1024 aa11.32□□□□□ -0.6
NELFE-205ENST00000441998 LRRC19Q9H756 370 aa11.32□□□□□ -0.6
NELFE-205ENST00000441998 GPR27Q9NS67 375 aa11.32□□□□□ -0.6
NELFE-205ENST00000441998 CNOT8Q9UFF9 292 aaKnown RBP11.32□□□□□ -0.6
NELFE-205ENST00000441998 LCMT1Q9UIC8 334 aa11.32□□□□□ -0.6
NELFE-205ENST00000441998 CAPN11Q9UMQ6 739 aa11.32□□□□□ -0.6
NELFE-205ENST00000441998 AP4E1Q9UPM8 1137 aa11.32□□□□□ -0.6
NELFE-205ENST00000441998 ZFR2Q9UPR6 939 aaKnown RBP11.32□□□□□ -0.6
NELFE-205ENST00000441998 BTBD3Q9Y2F9 522 aa11.32□□□□□ -0.6
NELFE-205ENST00000441998 CEP192Q8TEP8 1941 aa11.32□□□□□ -0.6
NELFE-205ENST00000441998 CFAP69A5D8W1 941 aa11.31□□□□□ -0.6
NELFE-205ENST00000441998 NEMP2A6NFY4 417 aa11.31□□□□□ -0.6
NELFE-205ENST00000441998 ARHGAP42A6NI28 874 aa11.31□□□□□ -0.6
NELFE-205ENST00000441998 A6NNZ2 444 aa11.31□□□□□ -0.6
NELFE-205ENST00000441998 GOLGA6L19H0YKK7 550 aa11.31□□□□□ -0.6
NELFE-205ENST00000441998 SLC31A1O15431 190 aa11.31□□□□□ -0.6
NELFE-205ENST00000441998 TMCC1O94876 653 aa11.31□□□□□ -0.6
NELFE-205ENST00000441998 SERPING1P05155 500 aa11.31□□□□□ -0.6
NELFE-205ENST00000441998 TPM3P06753 285 aa11.31□□□□□ -0.6
NELFE-205ENST00000441998 CKMT2P17540 419 aa11.31□□□□□ -0.6
NELFE-205ENST00000441998 SPINK2P20155 84 aa11.31□□□□□ -0.6
NELFE-205ENST00000441998 ZNF211Q13398 564 aaPredicted RBP11.31□□□□□ -0.6
NELFE-205ENST00000441998 PIGHQ14442 188 aaPredicted RBP11.31□□□□□ -0.6
NELFE-205ENST00000441998 AFMIDQ63HM1 303 aa11.31□□□□□ -0.6
NELFE-205ENST00000441998 KYAT3Q6YP21 454 aaKnown RBP11.31□□□□□ -0.6
NELFE-205ENST00000441998 PARS2Q7L3T8 475 aaKnown RBP11.31□□□□□ -0.6
NELFE-205ENST00000441998 DNAAF5Q86Y56 855 aa11.31□□□□□ -0.6
NELFE-205ENST00000441998 PYROXD2Q8N2H3 581 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms