RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 MYLK3Q32MK0 819 aa13.96□□□□□ -0.17
LTBR-202ENST00000440421 BOLA3Q53S33 107 aa13.96□□□□□ -0.17
LTBR-202ENST00000440421 FBXL19Q6PCT2 694 aa13.96□□□□□ -0.17
LTBR-202ENST00000440421 PARS2Q7L3T8 475 aaKnown RBP13.96□□□□□ -0.17
LTBR-202ENST00000440421 PIP4P1Q86T03 277 aa13.96□□□□□ -0.17
LTBR-202ENST00000440421 TRIM69Q86WT6 500 aa13.96□□□□□ -0.17
LTBR-202ENST00000440421 PLPP6Q8IY26 295 aa13.96□□□□□ -0.17
LTBR-202ENST00000440421 NPWQ8N729 165 aa13.96□□□□□ -0.17
LTBR-202ENST00000440421 NIPA2Q8N8Q9 360 aa13.96□□□□□ -0.17
LTBR-202ENST00000440421 ZNF564Q8TBZ8 553 aaPredicted RBP13.96□□□□□ -0.17
LTBR-202ENST00000440421 CASKIN2Q8WXE0 1202 aa13.96□□□□□ -0.17
LTBR-202ENST00000440421 CTNNBL1Q8WYA6 563 aaPredicted RBP13.96□□□□□ -0.17
LTBR-202ENST00000440421 EXOC2Q96KP1 924 aa13.96□□□□□ -0.17
LTBR-202ENST00000440421 GDAP1L1Q96MZ0 367 aa13.96□□□□□ -0.17
LTBR-202ENST00000440421 MYOCQ99972 504 aa13.96□□□□□ -0.17
LTBR-202ENST00000440421 HDAC8Q9BY41 377 aa13.96□□□□□ -0.17
LTBR-202ENST00000440421 TRIM5Q9C035 493 aa13.96□□□□□ -0.17
LTBR-202ENST00000440421 TM7SF3Q9NS93 570 aa13.96□□□□□ -0.17
LTBR-202ENST00000440421 SPTLC3Q9NUV7 552 aa13.96□□□□□ -0.17
LTBR-202ENST00000440421 UBA2Q9UBT2 640 aaPredicted RBP13.96□□□□□ -0.17
LTBR-202ENST00000440421 MFHAS1Q9Y4C4 1052 aa13.96□□□□□ -0.17
LTBR-202ENST00000440421 DNAH14Q0VDD8 3507 aa13.96□□□□□ -0.17
LTBR-202ENST00000440421 SPAARA0A1B0GVQ0 90 aa13.95□□□□□ -0.18
LTBR-202ENST00000440421 SSU72P8A0A1W2PR75 194 aa13.95□□□□□ -0.18
LTBR-202ENST00000440421 H0Y8X5 98 aa13.95□□□□□ -0.18
LTBR-202ENST00000440421 VILLO15195 856 aa13.95□□□□□ -0.18
LTBR-202ENST00000440421 SLC31A1O15431 190 aa13.95□□□□□ -0.18
LTBR-202ENST00000440421 SH3BP5O60239 455 aa13.95□□□□□ -0.18
LTBR-202ENST00000440421 PRAMEF11O60813 436 aa13.95□□□□□ -0.18
LTBR-202ENST00000440421 POP4O95707 220 aaKnown RBP13.95□□□□□ -0.18
LTBR-202ENST00000440421 IGSF6O95976 241 aa13.95□□□□□ -0.18
LTBR-202ENST00000440421 UGT2B4P06133 528 aa13.95□□□□□ -0.18
LTBR-202ENST00000440421 H2AFZP0C0S5 128 aa13.95□□□□□ -0.18
LTBR-202ENST00000440421 ADRB3P13945 408 aa13.95□□□□□ -0.18
LTBR-202ENST00000440421 PRLRP16471 622 aa13.95□□□□□ -0.18
LTBR-202ENST00000440421 AMPD1P23109 780 aa13.95□□□□□ -0.18
LTBR-202ENST00000440421 GJC1P36383 396 aa13.95□□□□□ -0.18
LTBR-202ENST00000440421 ARL4AP40617 200 aa13.95□□□□□ -0.18
LTBR-202ENST00000440421 CTSKP43235 329 aa13.95□□□□□ -0.18
LTBR-202ENST00000440421 HCAR3P49019 387 aa13.95□□□□□ -0.18
LTBR-202ENST00000440421 SLC14A1Q13336 389 aa13.95□□□□□ -0.18
LTBR-202ENST00000440421 DPYSQ14117 519 aa13.95□□□□□ -0.18
LTBR-202ENST00000440421 CYTH1Q15438 398 aa13.95□□□□□ -0.18
LTBR-202ENST00000440421 DPYSL2Q16555 572 aa13.95□□□□□ -0.18
LTBR-202ENST00000440421 INO80DQ53TQ3 878 aaPredicted RBP13.95□□□□□ -0.18
LTBR-202ENST00000440421 PRAMEF14Q5SWL7 426 aa13.95□□□□□ -0.18
LTBR-202ENST00000440421 NAPEPLDQ6IQ20 393 aa13.95□□□□□ -0.18
LTBR-202ENST00000440421 SARM1Q6SZW1 724 aa13.95□□□□□ -0.18
LTBR-202ENST00000440421 H2AFVQ71UI9 128 aa13.95□□□□□ -0.18
LTBR-202ENST00000440421 CPNE8Q86YQ8 564 aa13.95□□□□□ -0.18
LTBR-202ENST00000440421 NAXDQ8IW45 347 aa13.95□□□□□ -0.18
LTBR-202ENST00000440421 ARHGAP12Q8IWW6 846 aa13.95□□□□□ -0.18
LTBR-202ENST00000440421 KLHL32Q96NJ5 620 aa13.95□□□□□ -0.18
LTBR-202ENST00000440421 NHEJ1Q9H9Q4 299 aaPredicted RBP13.95□□□□□ -0.18
LTBR-202ENST00000440421 PDFQ9HBH1 243 aa13.95□□□□□ -0.18
LTBR-202ENST00000440421 LHX3Q9UBR4 397 aa13.95□□□□□ -0.18
LTBR-202ENST00000440421 TPX2Q9ULW0 747 aaKnown RBP13.95□□□□□ -0.18
LTBR-202ENST00000440421 CA5BQ9Y2D0 317 aa13.95□□□□□ -0.18
LTBR-202ENST00000440421 SPTBN2O15020 2390 aa13.95□□□□□ -0.18
LTBR-202ENST00000440421 A0A1W2PR77 199 aa13.94□□□□□ -0.18
LTBR-202ENST00000440421 C16orf96A6NNT2 1141 aa13.94□□□□□ -0.18
LTBR-202ENST00000440421 TMEM110-MUSTN1A8MSY1 372 aa13.94□□□□□ -0.18
LTBR-202ENST00000440421 UPK3BL1B0FP48 263 aa13.94□□□□□ -0.18
LTBR-202ENST00000440421 AKR1B15C9JRZ8 316 aaPredicted RBP13.94□□□□□ -0.18
LTBR-202ENST00000440421 UPK3BL2E5RIL1 263 aa13.94□□□□□ -0.18
LTBR-202ENST00000440421 INSIG1O15503 277 aa13.94□□□□□ -0.18
LTBR-202ENST00000440421 ZNF135P52742 658 aaPredicted RBP13.94□□□□□ -0.18
LTBR-202ENST00000440421 FAM193AP78312 1265 aa13.94□□□□□ -0.18
LTBR-202ENST00000440421 IL9RQ01113 521 aa13.94□□□□□ -0.18
LTBR-202ENST00000440421 SLC25A11Q02978 314 aaKnown RBP13.94□□□□□ -0.18
LTBR-202ENST00000440421 KRT81Q14533 505 aa13.94□□□□□ -0.18
LTBR-202ENST00000440421 SETMARQ53H47 684 aaPredicted RBP13.94□□□□□ -0.18
LTBR-202ENST00000440421 SLC45A4Q5BKX6 768 aa13.94□□□□□ -0.18
LTBR-202ENST00000440421 ZNF805Q5CZA5 627 aa13.94□□□□□ -0.18
LTBR-202ENST00000440421 AFMIDQ63HM1 303 aa13.94□□□□□ -0.18
LTBR-202ENST00000440421 SEL1L3Q68CR1 1132 aa13.94□□□□□ -0.18
LTBR-202ENST00000440421 NEK5Q6P3R8 708 aa13.94□□□□□ -0.18
LTBR-202ENST00000440421 GDPD4Q6W3E5 623 aa13.94□□□□□ -0.18
LTBR-202ENST00000440421 ARHGAP36Q6ZRI8 547 aa13.94□□□□□ -0.18
LTBR-202ENST00000440421 POLNQ7Z5Q5 900 aa13.94□□□□□ -0.18
LTBR-202ENST00000440421 HORMAD1Q86X24 394 aa13.94□□□□□ -0.18
LTBR-202ENST00000440421 CNGA4Q8IV77 575 aa13.94□□□□□ -0.18
LTBR-202ENST00000440421 TP53INP2Q8IXH6 220 aa13.94□□□□□ -0.18
LTBR-202ENST00000440421 SETD7Q8WTS6 366 aaKnown RBP13.94□□□□□ -0.18
LTBR-202ENST00000440421 TEKT4Q8WW24 435 aa13.94□□□□□ -0.18
LTBR-202ENST00000440421 VOPP1Q96AW1 172 aa13.94□□□□□ -0.18
LTBR-202ENST00000440421 SKA1Q96BD8 255 aa13.94□□□□□ -0.18
LTBR-202ENST00000440421 LRIG1Q96JA1 1093 aa13.94□□□□□ -0.18
LTBR-202ENST00000440421 CCDC42Q96M95 316 aa13.94□□□□□ -0.18
LTBR-202ENST00000440421 CSPG4P5Q96PW8 444 aa13.94□□□□□ -0.18
LTBR-202ENST00000440421 RBSNQ9H1K0 784 aa13.94□□□□□ -0.18
LTBR-202ENST00000440421 SP110Q9HB58 689 aa13.94□□□□□ -0.18
LTBR-202ENST00000440421 PCDH18Q9HCL0 1135 aa13.94□□□□□ -0.18
LTBR-202ENST00000440421 ZFR2Q9UPR6 939 aaKnown RBP13.94□□□□□ -0.18
LTBR-202ENST00000440421 DMTF1Q9Y222 760 aa13.94□□□□□ -0.18
LTBR-202ENST00000440421 TP53BP1Q12888 1972 aaPredicted RBP13.94□□□□□ -0.18
LTBR-202ENST00000440421 DOCK9Q9BZ29 2069 aa13.94□□□□□ -0.18
LTBR-202ENST00000440421 CNOT1A5YKK6 2376 aaKnown RBP13.93□□□□□ -0.18
LTBR-202ENST00000440421 PRAMEF26H0Y7S4 382 aa13.93□□□□□ -0.18
LTBR-202ENST00000440421 TLR4O00206 839 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms