RNA–Protein interactions for RNA: ENST00000439976.5

LAMB1-205, Transcript of laminin subunit beta 1, human

TSL 5

Gene LAMB1, Length 703 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMB1-205	ENST00000439976	BOC	Q9BWV1	1114 aa		16.54	■□□□□ 0.24
LAMB1-205	ENST00000439976	SRRT	Q9BXP5	876 aa	Known RBP	16.54	■□□□□ 0.24
LAMB1-205	ENST00000439976	CEP44	Q9C0F1	390 aa		16.54	■□□□□ 0.24
LAMB1-205	ENST00000439976	TCEAL2	Q9H3H9	227 aa	Predicted RBP	16.54	■□□□□ 0.24
LAMB1-205	ENST00000439976	WDCP	Q9H6R7	721 aa		16.54	■□□□□ 0.24
LAMB1-205	ENST00000439976	GGT7	Q9UJ14	662 aa		16.54	■□□□□ 0.24
LAMB1-205	ENST00000439976	AHCTF1	Q8WYP5	2266 aa		16.54	■□□□□ 0.24
LAMB1-205	ENST00000439976	HECTD1	Q9ULT8	2610 aa		16.54	■□□□□ 0.24
LAMB1-205	ENST00000439976	CHD5	Q8TDI0	1954 aa		16.53	■□□□□ 0.24
LAMB1-205	ENST00000439976	ILVBL	A1L0T0	632 aa		16.53	■□□□□ 0.24
LAMB1-205	ENST00000439976	IGLON5	A6NGN9	336 aa		16.53	■□□□□ 0.24
LAMB1-205	ENST00000439976		H3BM21	787 aa		16.53	■□□□□ 0.24
LAMB1-205	ENST00000439976	TCEA3	O75764	348 aa		16.53	■□□□□ 0.24
LAMB1-205	ENST00000439976	JUND	P17535	347 aa		16.53	■□□□□ 0.24
LAMB1-205	ENST00000439976	RBMS1	P29558	406 aa	Known RBP	16.53	■□□□□ 0.24
LAMB1-205	ENST00000439976	ABL2	P42684	1182 aa		16.53	■□□□□ 0.24
LAMB1-205	ENST00000439976	CCNH	P51946	323 aa	Predicted RBP	16.53	■□□□□ 0.24
LAMB1-205	ENST00000439976	CLN3	Q13286	438 aa		16.53	■□□□□ 0.24
LAMB1-205	ENST00000439976	SLC35F3	Q8IY50	421 aa		16.53	■□□□□ 0.24
LAMB1-205	ENST00000439976	RBFA	Q8N0V3	343 aa		16.53	■□□□□ 0.24
LAMB1-205	ENST00000439976	LMX1A	Q8TE12	382 aa		16.53	■□□□□ 0.24
LAMB1-205	ENST00000439976	HEPH	Q9BQS7	1158 aa		16.53	■□□□□ 0.24
LAMB1-205	ENST00000439976	RRN3	Q9NYV6	651 aa		16.53	■□□□□ 0.24
LAMB1-205	ENST00000439976	NCKIPSD	Q9NZQ3	722 aa		16.53	■□□□□ 0.24
LAMB1-205	ENST00000439976	APEX2	Q9UBZ4	518 aa		16.53	■□□□□ 0.24
LAMB1-205	ENST00000439976	HOOK1	Q9UJC3	728 aa	Known RBP	16.53	■□□□□ 0.24
LAMB1-205	ENST00000439976	RIOK3	O14730	519 aa	Known RBP	16.52	■□□□□ 0.24
LAMB1-205	ENST00000439976	EFS	O43281	561 aa		16.52	■□□□□ 0.24
LAMB1-205	ENST00000439976	OR1E1	P30953	314 aa		16.52	■□□□□ 0.24
LAMB1-205	ENST00000439976	RECQL	P46063	649 aa	Predicted RBP	16.52	■□□□□ 0.24
LAMB1-205	ENST00000439976	SULT1E1	P49888	294 aa		16.52	■□□□□ 0.24
LAMB1-205	ENST00000439976	PAK1	Q13153	545 aa		16.52	■□□□□ 0.24
LAMB1-205	ENST00000439976	NR0B2	Q15466	257 aa		16.52	■□□□□ 0.24
LAMB1-205	ENST00000439976	CARD16	Q5EG05	197 aa		16.52	■□□□□ 0.24
LAMB1-205	ENST00000439976	TRNP1	Q6NT89	227 aa		16.52	■□□□□ 0.24
LAMB1-205	ENST00000439976	ZNF783	Q6ZMS7	281 aa		16.52	■□□□□ 0.24
LAMB1-205	ENST00000439976	BNIPL	Q7Z465	357 aa		16.52	■□□□□ 0.24
LAMB1-205	ENST00000439976	SLC47A2	Q86VL8	602 aa		16.52	■□□□□ 0.24
LAMB1-205	ENST00000439976	PCDH20	Q8N6Y1	951 aa	Known RBP	16.52	■□□□□ 0.24
LAMB1-205	ENST00000439976	TPCN2	Q8NHX9	752 aa		16.52	■□□□□ 0.24
LAMB1-205	ENST00000439976	ASB12	Q8WXK4	309 aa		16.52	■□□□□ 0.24
LAMB1-205	ENST00000439976	TBCB	Q99426	244 aa		16.52	■□□□□ 0.24
LAMB1-205	ENST00000439976	CLMP	Q9H6B4	373 aa		16.52	■□□□□ 0.24
LAMB1-205	ENST00000439976	SIX2	Q9NPC8	291 aa		16.52	■□□□□ 0.24
LAMB1-205	ENST00000439976	PLCB1	Q9NQ66	1216 aa		16.52	■□□□□ 0.24
LAMB1-205	ENST00000439976	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	16.52	■□□□□ 0.24
LAMB1-205	ENST00000439976	ITM2B	Q9Y287	266 aa		16.52	■□□□□ 0.24
LAMB1-205	ENST00000439976	FCF1	Q9Y324	198 aa	Known RBP	16.52	■□□□□ 0.24
LAMB1-205	ENST00000439976	BIN1	O00499	593 aa		16.51	■□□□□ 0.23
LAMB1-205	ENST00000439976	FPGT	O14772	594 aa		16.51	■□□□□ 0.23
LAMB1-205	ENST00000439976	MUSK	O15146	869 aa		16.51	■□□□□ 0.23
LAMB1-205	ENST00000439976	PNMA6A	P0CW24	399 aa	Predicted RBP	16.51	■□□□□ 0.23
LAMB1-205	ENST00000439976	GK	P32189	559 aa		16.51	■□□□□ 0.23
LAMB1-205	ENST00000439976	CLCN1	P35523	988 aa		16.51	■□□□□ 0.23
LAMB1-205	ENST00000439976	RNASE9	P60153	205 aa	Known RBP	16.51	■□□□□ 0.23
LAMB1-205	ENST00000439976	SLC20A2	Q08357	652 aa		16.51	■□□□□ 0.23
LAMB1-205	ENST00000439976	ARL13B	Q3SXY8	428 aa		16.51	■□□□□ 0.23
LAMB1-205	ENST00000439976	RETSAT	Q6NUM9	610 aa		16.51	■□□□□ 0.23
LAMB1-205	ENST00000439976	LRRC31	Q6UY01	552 aa		16.51	■□□□□ 0.23
LAMB1-205	ENST00000439976	ZSCAN30	Q86W11	494 aa		16.51	■□□□□ 0.23
LAMB1-205	ENST00000439976	ZDHHC17	Q8IUH5	632 aa		16.51	■□□□□ 0.23
LAMB1-205	ENST00000439976	CENPT	Q96BT3	561 aa		16.51	■□□□□ 0.23
LAMB1-205	ENST00000439976	FAM81B	Q96LP2	452 aa		16.51	■□□□□ 0.23
LAMB1-205	ENST00000439976	SPON2	Q9BUD6	331 aa		16.51	■□□□□ 0.23
LAMB1-205	ENST00000439976	LRRC61	Q9BV99	259 aa		16.51	■□□□□ 0.23
LAMB1-205	ENST00000439976	CLPB	Q9H078	707 aa		16.51	■□□□□ 0.23
LAMB1-205	ENST00000439976	GOLGA6L4	A6NEF3	574 aa		16.5	■□□□□ 0.23
LAMB1-205	ENST00000439976	C16orf96	A6NNT2	1141 aa		16.5	■□□□□ 0.23
LAMB1-205	ENST00000439976	NTN3	O00634	580 aa	Predicted RBP	16.5	■□□□□ 0.23
LAMB1-205	ENST00000439976	TSPAN6	O43657	245 aa		16.5	■□□□□ 0.23
LAMB1-205	ENST00000439976	TNFSF15	O95150	251 aa		16.5	■□□□□ 0.23
LAMB1-205	ENST00000439976	PON1	P27169	355 aa		16.5	■□□□□ 0.23
LAMB1-205	ENST00000439976	IGFALS	P35858	605 aa		16.5	■□□□□ 0.23
LAMB1-205	ENST00000439976	FLT3	P36888	993 aa		16.5	■□□□□ 0.23
LAMB1-205	ENST00000439976	MLLT3	P42568	568 aa	Predicted RBP	16.5	■□□□□ 0.23
LAMB1-205	ENST00000439976	DNA2	P51530	1060 aa		16.5	■□□□□ 0.23
LAMB1-205	ENST00000439976	GNA12	Q03113	381 aa		16.5	■□□□□ 0.23
LAMB1-205	ENST00000439976	PTK2	Q05397	1052 aa		16.5	■□□□□ 0.23
LAMB1-205	ENST00000439976	DEUP1	Q05D60	604 aa		16.5	■□□□□ 0.23
LAMB1-205	ENST00000439976	SGCG	Q13326	291 aa		16.5	■□□□□ 0.23
LAMB1-205	ENST00000439976	C1orf61	Q13536	156 aa		16.5	■□□□□ 0.23
LAMB1-205	ENST00000439976	SLC25A52	Q3SY17	297 aa		16.5	■□□□□ 0.23
LAMB1-205	ENST00000439976	C6orf132	Q5T0Z8	1188 aa		16.5	■□□□□ 0.23
LAMB1-205	ENST00000439976	PLPP6	Q8IY26	295 aa		16.5	■□□□□ 0.23
LAMB1-205	ENST00000439976	DENND6B	Q8NEG7	585 aa		16.5	■□□□□ 0.23
LAMB1-205	ENST00000439976	OR6K2	Q8NGY2	324 aa		16.5	■□□□□ 0.23
LAMB1-205	ENST00000439976	WDR36	Q8NI36	951 aa	Known RBP	16.5	■□□□□ 0.23
LAMB1-205	ENST00000439976	CCDC97	Q96F63	343 aa	Predicted RBP	16.5	■□□□□ 0.23
LAMB1-205	ENST00000439976	IL12RB2	Q99665	862 aa		16.5	■□□□□ 0.23
LAMB1-205	ENST00000439976	TM6SF2	Q9BZW4	377 aa		16.5	■□□□□ 0.23
LAMB1-205	ENST00000439976	ZDHHC6	Q9H6R6	413 aa		16.5	■□□□□ 0.23
LAMB1-205	ENST00000439976	ATP13A1	Q9HD20	1204 aa		16.5	■□□□□ 0.23
LAMB1-205	ENST00000439976	APOBEC3B	Q9UH17	382 aa	Known RBP	16.5	■□□□□ 0.23
LAMB1-205	ENST00000439976	IPO11	Q9UI26	975 aa	Known RBP	16.5	■□□□□ 0.23
LAMB1-205	ENST00000439976	STAP1	Q9ULZ2	295 aa		16.5	■□□□□ 0.23
LAMB1-205	ENST00000439976	LMO7DN	F2Z398	122 aa		16.49	■□□□□ 0.23
LAMB1-205	ENST00000439976	FOXN3	O00409	490 aa	Predicted RBP	16.49	■□□□□ 0.23
LAMB1-205	ENST00000439976	AREL1	O15033	823 aa		16.49	■□□□□ 0.23
LAMB1-205	ENST00000439976	YY2	O15391	372 aa		16.49	■□□□□ 0.23
LAMB1-205	ENST00000439976	SRGAP2	O75044	1071 aa		16.49	■□□□□ 0.23

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms