RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 APRTP07741 180 aa20.99■□□□□ 0.95
CHD3-204ENST00000439235 BMP1P13497 986 aa20.99■□□□□ 0.95
CHD3-204ENST00000439235 CR2P20023 1033 aa20.99■□□□□ 0.95
CHD3-204ENST00000439235 TPSB2P20231 275 aa20.99■□□□□ 0.95
CHD3-204ENST00000439235 RECQLP46063 649 aaPredicted RBP20.99■□□□□ 0.95
CHD3-204ENST00000439235 CSNK1DP48730 415 aa20.99■□□□□ 0.95
CHD3-204ENST00000439235 ITGA8P53708 1063 aa20.99■□□□□ 0.95
CHD3-204ENST00000439235 TERF1P54274 439 aa20.99■□□□□ 0.95
CHD3-204ENST00000439235 AP1S1P61966 158 aa20.99■□□□□ 0.95
CHD3-204ENST00000439235 SNRPD1P62314 119 aaKnown RBP20.99■□□□□ 0.95
CHD3-204ENST00000439235 CDK16Q00536 496 aa20.99■□□□□ 0.95
CHD3-204ENST00000439235 HLTFQ14527 1009 aaKnown RBP eCLIP20.99■□□□□ 0.95
CHD3-204ENST00000439235 KCNJ11Q14654 390 aa20.99■□□□□ 0.95
CHD3-204ENST00000439235 PON2Q15165 354 aa20.99■□□□□ 0.95
CHD3-204ENST00000439235 TPSAB1Q15661 275 aa20.99■□□□□ 0.95
CHD3-204ENST00000439235 DLG2Q15700 870 aa20.99■□□□□ 0.95
CHD3-204ENST00000439235 TMEM196Q5HYL7 178 aa20.99■□□□□ 0.95
CHD3-204ENST00000439235 HIBCHQ6NVY1 386 aaPredicted RBP20.99■□□□□ 0.95
CHD3-204ENST00000439235 WDR93Q6P2C0 686 aa20.99■□□□□ 0.95
CHD3-204ENST00000439235 TPRG1Q6ZUI0 275 aa20.99■□□□□ 0.95
CHD3-204ENST00000439235 KLHDC8BQ8IXV7 354 aa20.99■□□□□ 0.95
CHD3-204ENST00000439235 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.99■□□□□ 0.95
CHD3-204ENST00000439235 EIF1ADQ8N9N8 165 aaKnown RBP20.99■□□□□ 0.95
CHD3-204ENST00000439235 OR2AP1Q8NGE2 309 aa20.99■□□□□ 0.95
CHD3-204ENST00000439235 ARRDC2Q8TBH0 407 aa20.99■□□□□ 0.95
CHD3-204ENST00000439235 IFT81Q8WYA0 676 aa20.99■□□□□ 0.95
CHD3-204ENST00000439235 EXOC2Q96KP1 924 aa20.99■□□□□ 0.95
CHD3-204ENST00000439235 TM6SF2Q9BZW4 377 aa20.99■□□□□ 0.95
CHD3-204ENST00000439235 FAM153AQ9UHL3 310 aa20.99■□□□□ 0.95
CHD3-204ENST00000439235 SLCO3A1Q9UIG8 710 aa20.99■□□□□ 0.95
CHD3-204ENST00000439235 STARD13Q9Y3M8 1113 aa20.99■□□□□ 0.95
CHD3-204ENST00000439235 FARP1Q9Y4F1 1045 aaPredicted RBP20.99■□□□□ 0.95
CHD3-204ENST00000439235 INSIG1O15503 277 aa20.98■□□□□ 0.95
CHD3-204ENST00000439235 SERPINF2P08697 491 aa20.98■□□□□ 0.95
CHD3-204ENST00000439235 CD86P42081 329 aa20.98■□□□□ 0.95
CHD3-204ENST00000439235 RGRP47804 291 aa20.98■□□□□ 0.95
CHD3-204ENST00000439235 SCNN1BP51168 640 aa20.98■□□□□ 0.95
CHD3-204ENST00000439235 PRKCQQ04759 706 aa20.98■□□□□ 0.95
CHD3-204ENST00000439235 NIPAL4Q0D2K0 466 aa20.98■□□□□ 0.95
CHD3-204ENST00000439235 MPP3Q13368 585 aa20.98■□□□□ 0.95
CHD3-204ENST00000439235 NAA30Q147X3 362 aaPredicted RBP20.98■□□□□ 0.95
CHD3-204ENST00000439235 PPP1R21Q6ZMI0 780 aa20.98■□□□□ 0.95
CHD3-204ENST00000439235 PLPP6Q8IY26 295 aa20.98■□□□□ 0.95
CHD3-204ENST00000439235 NAT8LQ8N9F0 302 aa20.98■□□□□ 0.95
CHD3-204ENST00000439235 FAM3CQ92520 227 aa20.98■□□□□ 0.95
CHD3-204ENST00000439235 ART4Q93070 314 aa20.98■□□□□ 0.95
CHD3-204ENST00000439235 MYO19Q96H55 970 aa20.98■□□□□ 0.95
CHD3-204ENST00000439235 OXNAD1Q96HP4 312 aaPredicted RBP20.98■□□□□ 0.95
CHD3-204ENST00000439235 RBM15Q96T37 977 aaKnown RBP eCLIP20.98■□□□□ 0.95
CHD3-204ENST00000439235 GORASP1Q9BQQ3 440 aa20.98■□□□□ 0.95
CHD3-204ENST00000439235 TNKS2Q9H2K2 1166 aa20.98■□□□□ 0.95
CHD3-204ENST00000439235 LRRC40Q9H9A6 602 aa20.98■□□□□ 0.95
CHD3-204ENST00000439235 FBRSL1Q9HCM7 1045 aaKnown RBP20.98■□□□□ 0.95
CHD3-204ENST00000439235 THAP10Q9P2Z0 257 aaPredicted RBP20.98■□□□□ 0.95
CHD3-204ENST00000439235 AP2A1O95782 977 aa20.97■□□□□ 0.95
CHD3-204ENST00000439235 HNRNPLP14866 589 aaKnown RBP eCLIP20.97■□□□□ 0.95
CHD3-204ENST00000439235 CA4P22748 312 aa20.97■□□□□ 0.95
CHD3-204ENST00000439235 SARNPP82979 210 aaKnown RBP20.97■□□□□ 0.95
CHD3-204ENST00000439235 SKOR1P84550 965 aa20.97■□□□□ 0.95
CHD3-204ENST00000439235 ZNF234Q14588 700 aa20.97■□□□□ 0.95
CHD3-204ENST00000439235 CARD16Q5EG05 197 aa20.97■□□□□ 0.95
CHD3-204ENST00000439235 DGKKQ5KSL6 1271 aa20.97■□□□□ 0.95
CHD3-204ENST00000439235 ATXN7L2Q5T6C5 722 aaPredicted RBP20.97■□□□□ 0.95
CHD3-204ENST00000439235 FSTL4Q6MZW2 842 aa20.97■□□□□ 0.95
CHD3-204ENST00000439235 SERPINA13PQ6UXR4 307 aa20.97■□□□□ 0.95
CHD3-204ENST00000439235 SRLQ86TD4 932 aa20.97■□□□□ 0.95
CHD3-204ENST00000439235 RNF135Q8IUD6 432 aa20.97■□□□□ 0.95
CHD3-204ENST00000439235 SFTPA1Q8IWL2 248 aa20.97■□□□□ 0.95
CHD3-204ENST00000439235 UBALD2Q8IYN6 164 aa20.97■□□□□ 0.95
CHD3-204ENST00000439235 PDCD7Q8N8D1 485 aaKnown RBP20.97■□□□□ 0.95
CHD3-204ENST00000439235 SPATA22Q8NHS9 363 aa20.97■□□□□ 0.95
CHD3-204ENST00000439235 KCNV2Q8TDN2 545 aa20.97■□□□□ 0.95
CHD3-204ENST00000439235 FRS2Q8WU20 508 aa20.97■□□□□ 0.95
CHD3-204ENST00000439235 PRCCQ92733 491 aaPredicted RBP20.97■□□□□ 0.95
CHD3-204ENST00000439235 MLPHQ9BV36 600 aaPredicted RBP20.97■□□□□ 0.95
CHD3-204ENST00000439235 PARD6BQ9BYG5 372 aa20.97■□□□□ 0.95
CHD3-204ENST00000439235 FRMD8Q9BZ67 464 aaPredicted RBP20.97■□□□□ 0.95
CHD3-204ENST00000439235 ARHGEF3Q9NR81 526 aa20.97■□□□□ 0.95
CHD3-204ENST00000439235 MTRF1LQ9UGC7 380 aaKnown RBP20.97■□□□□ 0.95
CHD3-204ENST00000439235 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.96■□□□□ 0.95
CHD3-204ENST00000439235 TTC34A8MYJ7 566 aa20.96■□□□□ 0.95
CHD3-204ENST00000439235 ZNF821O75541 412 aaPredicted RBP20.96■□□□□ 0.95
CHD3-204ENST00000439235 MT-CYBP00156 380 aaPredicted RBP20.96■□□□□ 0.95
CHD3-204ENST00000439235 MMP2P08253 660 aa20.96■□□□□ 0.95
CHD3-204ENST00000439235 TNNT3P45378 269 aaPredicted RBP20.96■□□□□ 0.95
CHD3-204ENST00000439235 CARSP49589 748 aaKnown RBP20.96■□□□□ 0.95
CHD3-204ENST00000439235 PLTPP55058 493 aa20.96■□□□□ 0.95
CHD3-204ENST00000439235 RAD51Q06609 339 aa20.96■□□□□ 0.95
CHD3-204ENST00000439235 GRM3Q14832 879 aa20.96■□□□□ 0.95
CHD3-204ENST00000439235 TRADDQ15628 312 aa20.96■□□□□ 0.95
CHD3-204ENST00000439235 FBXO43Q4G163 708 aa20.96■□□□□ 0.95
CHD3-204ENST00000439235 EGFLAMQ63HQ2 1017 aa20.96■□□□□ 0.95
CHD3-204ENST00000439235 NAPEPLDQ6IQ20 393 aa20.96■□□□□ 0.95
CHD3-204ENST00000439235 NCEH1Q6PIU2 408 aa20.96■□□□□ 0.95
CHD3-204ENST00000439235 ZDHHC24Q6UX98 284 aa20.96■□□□□ 0.95
CHD3-204ENST00000439235 ZNF852Q6ZMS4 543 aa20.96■□□□□ 0.95
CHD3-204ENST00000439235 Q6ZVU0 165 aa20.96■□□□□ 0.95
CHD3-204ENST00000439235 PRPF39Q86UA1 669 aaKnown RBP20.96■□□□□ 0.95
CHD3-204ENST00000439235 RYBPQ8N488 228 aaPredicted RBP20.96■□□□□ 0.95
CHD3-204ENST00000439235 ZNF513Q8N8E2 541 aaPredicted RBP20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms