RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 U2AF1L4Q8WU68 220 aaKnown RBP3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 DNASE2BQ8WZ79 361 aa3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 PHF21BQ96EK2 531 aa3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 URB1-AS1Q96HZ7 61 aa3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 FBXO28Q9NVF7 368 aa3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 SLC52A1Q9NWF4 448 aa3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 MYO1AQ9UBC5 1043 aa3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 KDM3BQ7LBC6 1761 aa3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 CABIN1Q9Y6J0 2220 aa3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 TECTAO75443 2155 aa3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 SH3TC1Q8TE82 1336 aa3.23□□□□□ -1.89
HMGB1P18-201ENST00000438801 GAGE12JA6NER3 117 aa3.23□□□□□ -1.89
HMGB1P18-201ENST00000438801 POM121BA6NF01 834 aa3.23□□□□□ -1.89
HMGB1P18-201ENST00000438801 NPC1O15118 1278 aa3.23□□□□□ -1.89
HMGB1P18-201ENST00000438801 KAT7O95251 611 aa3.23□□□□□ -1.89
HMGB1P18-201ENST00000438801 CCL5P13501 91 aa3.23□□□□□ -1.89
HMGB1P18-201ENST00000438801 CPA1P15085 419 aa3.23□□□□□ -1.89
HMGB1P18-201ENST00000438801 EGR1P18146 543 aa3.23□□□□□ -1.89
HMGB1P18-201ENST00000438801 HMGB2P26583 209 aaKnown RBP3.23□□□□□ -1.89
HMGB1P18-201ENST00000438801 GABRB3P28472 473 aa3.23□□□□□ -1.89
HMGB1P18-201ENST00000438801 RBMXP38159 391 aaKnown RBP3.23□□□□□ -1.89
HMGB1P18-201ENST00000438801 PIK3CBP42338 1070 aa3.23□□□□□ -1.89
HMGB1P18-201ENST00000438801 SLC37A1P57057 533 aa3.23□□□□□ -1.89
HMGB1P18-201ENST00000438801 TMF1P82094 1093 aa3.23□□□□□ -1.89
HMGB1P18-201ENST00000438801 RPL36AP83881 106 aaKnown RBP3.23□□□□□ -1.89
HMGB1P18-201ENST00000438801 NAIPQ13075 1403 aa3.23□□□□□ -1.89
HMGB1P18-201ENST00000438801 RRS1Q15050 365 aaKnown RBP3.23□□□□□ -1.89
HMGB1P18-201ENST00000438801 MSANTD2Q6P1R3 559 aa3.23□□□□□ -1.89
HMGB1P18-201ENST00000438801 Q6ZTK2 550 aa3.23□□□□□ -1.89
HMGB1P18-201ENST00000438801 CUZD1Q86UP6 607 aa3.23□□□□□ -1.89
HMGB1P18-201ENST00000438801 GPSM1Q86YR5 675 aa3.23□□□□□ -1.89
HMGB1P18-201ENST00000438801 GPC2Q8N158 579 aa3.23□□□□□ -1.89
HMGB1P18-201ENST00000438801 CCDC33Q8N5R6 958 aa3.23□□□□□ -1.89
HMGB1P18-201ENST00000438801 RNF152Q8N8N0 203 aa3.23□□□□□ -1.89
HMGB1P18-201ENST00000438801 PRR26Q8N8Z3 221 aa3.23□□□□□ -1.89
HMGB1P18-201ENST00000438801 KAT2AQ92830 837 aa3.23□□□□□ -1.89
HMGB1P18-201ENST00000438801 SEZ6LQ9BYH1 1024 aa3.23□□□□□ -1.89
HMGB1P18-201ENST00000438801 DCLK3Q9C098 648 aa3.23□□□□□ -1.89
HMGB1P18-201ENST00000438801 PLAC1Q9HBJ0 212 aa3.23□□□□□ -1.89
HMGB1P18-201ENST00000438801 UBE2J1Q9Y385 318 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P18-201ENST00000438801 PCDHB7Q9Y5E2 793 aa3.23□□□□□ -1.89
HMGB1P18-201ENST00000438801 PTPRQQ9UMZ3 2332 aa3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 MRC1P22897 1456 aa3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 A0A1W2PPC4 97 aa3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 GXYLT2A0PJZ3 443 aa3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 OR6C75A6NL08 312 aa3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 KPNA5O15131 536 aa3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 PQBP1O60828 265 aaKnown RBP3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 NDST3O95803 873 aa3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 IGKV3-20P01619 116 aa3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 TFRCP02786 760 aaKnown RBP3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 PRB1P04280 392 aa3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 CYP1A2P05177 515 aa3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 SRGAP2BP0DMP2 458 aa3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 TSHRP16473 764 aa3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 TM4SF4P48230 202 aa3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 RASSF2P50749 326 aa3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 GAS1P54826 345 aa3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 EIF5P55010 431 aaKnown RBP3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 SREBF2Q12772 1141 aa3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 CSHL1Q14406 222 aa3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 ARHGEF6Q15052 776 aa3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 SHHQ15465 462 aa3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 WDR93Q6P2C0 686 aa3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 RTL10Q7L3V2 364 aa3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 KDELC2Q7Z4H8 507 aa3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 C14orf80Q86SX3 495 aa3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 EXD3Q8N9H8 876 aa3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 TTC8Q8TAM2 541 aa3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 LMO3Q8TAP4 145 aa3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 NR4A3Q92570 626 aa3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 NPIPB3Q92617 1050 aa3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 C6orf106Q9H6K1 298 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 KCNK9Q9NPC2 374 aa3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 KRCC1Q9NPI7 259 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 NCKIPSDQ9NZQ3 722 aa3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 TBC1D14Q9P2M4 693 aa3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 PTGDR2Q9Y5Y4 395 aa3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 DLEC1Q9Y238 1755 aa3.22□□□□□ -1.89
HMGB1P18-201ENST00000438801 A0A1B0GVT2 93 aa3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 CLEC18AA5D8T8 446 aa3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 BECN2A8MW95 431 aa3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 ERVV-2B6SEH9 535 aa3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 INAFM1C9JVW0 142 aa3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 J3KTA2 159 aa3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 DHHO43323 396 aa3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 ARSBP15848 533 aa3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 PCYT1AP49585 367 aa3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 CASP5P51878 434 aa3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 SHC2P98077 582 aa3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 CRYZQ08257 329 aaKnown RBP3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 NSUN2Q08J23 767 aaKnown RBP eCLIP3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 Q0VFX4 171 aa3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 PMPCAQ10713 525 aa3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 MAPKAPK3Q16644 382 aa3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 DGKKQ5KSL6 1271 aa3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 PRAMEF19Q5SWL8 479 aa3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 GFI1BQ5VTD9 330 aa3.21□□□□□ -1.9
HMGB1P18-201ENST00000438801 SLC16A12Q6ZSM3 486 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms