RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 ACTL7AQ9Y615 435 aa11.15□□□□□ -0.62
SPTLC1P4-201ENST00000435997 BPTFQ12830 3046 aa11.15□□□□□ -0.62
SPTLC1P4-201ENST00000435997 COL27A1Q8IZC6 1860 aaPredicted RBP11.15□□□□□ -0.63
SPTLC1P4-201ENST00000435997 KALRNO60229 2985 aa11.14□□□□□ -0.63
SPTLC1P4-201ENST00000435997 H3BM21 787 aa11.14□□□□□ -0.63
SPTLC1P4-201ENST00000435997 ERVH48-1M5A8F1 160 aa11.14□□□□□ -0.63
SPTLC1P4-201ENST00000435997 TPP1O14773 563 aa11.14□□□□□ -0.63
SPTLC1P4-201ENST00000435997 AREL1O15033 823 aa11.14□□□□□ -0.63
SPTLC1P4-201ENST00000435997 SRGAP2O75044 1071 aa11.14□□□□□ -0.63
SPTLC1P4-201ENST00000435997 CSO75390 466 aaKnown RBP11.14□□□□□ -0.63
SPTLC1P4-201ENST00000435997 PAK4O96013 591 aaPredicted RBP11.14□□□□□ -0.63
SPTLC1P4-201ENST00000435997 MYF5P13349 255 aa11.14□□□□□ -0.63
SPTLC1P4-201ENST00000435997 PRKCSHP14314 528 aaPredicted RBP11.14□□□□□ -0.63
SPTLC1P4-201ENST00000435997 UCHL3P15374 230 aa11.14□□□□□ -0.63
SPTLC1P4-201ENST00000435997 MTIF2P46199 727 aaKnown RBP11.14□□□□□ -0.63
SPTLC1P4-201ENST00000435997 MAPKAPK2P49137 400 aa11.14□□□□□ -0.63
SPTLC1P4-201ENST00000435997 PDX1P52945 283 aa11.14□□□□□ -0.63
SPTLC1P4-201ENST00000435997 CCDC173Q0VFZ6 552 aa11.14□□□□□ -0.63
SPTLC1P4-201ENST00000435997 EIF2B5Q13144 721 aaKnown RBP11.14□□□□□ -0.63
SPTLC1P4-201ENST00000435997 RAPGEF1Q13905 1077 aa11.14□□□□□ -0.63
SPTLC1P4-201ENST00000435997 DPCR1Q3MIW9 517 aa11.14□□□□□ -0.63
SPTLC1P4-201ENST00000435997 RAB6CQ53S08 254 aa11.14□□□□□ -0.63
SPTLC1P4-201ENST00000435997 ZNF542PQ5EBM4 170 aa11.14□□□□□ -0.63
SPTLC1P4-201ENST00000435997 CREBRFQ8IUR6 639 aa11.14□□□□□ -0.63
SPTLC1P4-201ENST00000435997 LSMEM2Q8N112 164 aa11.14□□□□□ -0.63
SPTLC1P4-201ENST00000435997 IFI44Q8TCB0 444 aa11.14□□□□□ -0.63
SPTLC1P4-201ENST00000435997 ARHGEF2Q92974 986 aaKnown RBP11.14□□□□□ -0.63
SPTLC1P4-201ENST00000435997 RAB7BQ96AH8 199 aa11.14□□□□□ -0.63
SPTLC1P4-201ENST00000435997 GRAMD1AQ96CP6 724 aa11.14□□□□□ -0.63
SPTLC1P4-201ENST00000435997 TBATAQ96M53 351 aa11.14□□□□□ -0.63
SPTLC1P4-201ENST00000435997 TM6SF2Q9BZW4 377 aa11.14□□□□□ -0.63
SPTLC1P4-201ENST00000435997 RAB6CQ9H0N0 254 aa11.14□□□□□ -0.63
SPTLC1P4-201ENST00000435997 POLR1BQ9H9Y6 1135 aa11.14□□□□□ -0.63
SPTLC1P4-201ENST00000435997 TMEM248Q9NWD8 314 aa11.14□□□□□ -0.63
SPTLC1P4-201ENST00000435997 GGT7Q9UJ14 662 aa11.14□□□□□ -0.63
SPTLC1P4-201ENST00000435997 NOCTQ9UK39 431 aaKnown RBP11.14□□□□□ -0.63
SPTLC1P4-201ENST00000435997 PNMA8BQ9ULN7 279 aaPredicted RBP11.14□□□□□ -0.63
SPTLC1P4-201ENST00000435997 GCN1Q92616 2671 aaKnown RBP11.14□□□□□ -0.63
SPTLC1P4-201ENST00000435997 EME2A4GXA9 379 aaPredicted RBP11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 IGLON5A6NGN9 336 aa11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 C16orf96A6NNT2 1141 aa11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 AQP9O43315 295 aa11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 TSPAN6O43657 245 aa11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 USP12O75317 370 aa11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 GSRP00390 522 aa11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 CYP1A1P04798 512 aaPredicted RBP11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 MMEP08473 750 aa11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 PLA2G2AP14555 144 aa11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 TGM2P21980 687 aa11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 MMP8P22894 467 aa11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 GKP32189 559 aa11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 ACVRL1P37023 503 aa11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 ETFBP38117 255 aa11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 DUSP3P51452 185 aaPredicted RBP11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 GSCP56915 257 aaPredicted RBP11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 PDE1CQ14123 709 aaPredicted RBP11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 ISXQ2M1V0 245 aa11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 ZNF805Q5CZA5 627 aa11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 TAF3Q5VWG9 929 aa11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 NAA35Q5VZE5 725 aa11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 GUSBP11Q6P575 273 aa11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 FAM114A1Q8IWE2 563 aa11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 EMC1Q8N766 993 aa11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 OR2AP1Q8NGE2 309 aa11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 CENPTQ96BT3 561 aa11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 PRR11Q96HE9 360 aaPredicted RBP11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 FEM1CQ96JP0 617 aa11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 LGMNQ99538 433 aa11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 TUBGCP2Q9BSJ2 902 aa11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 SPON2Q9BUD6 331 aa11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 BOCQ9BWV1 1114 aa11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 ZDHHC6Q9H6R6 413 aa11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 METTL5Q9NRN9 209 aaKnown RBP11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 EVA1BQ9NVM1 165 aa11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 NCKIPSDQ9NZQ3 722 aa11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 SALL4Q9UJQ4 1053 aa11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 ITM2BQ9Y287 266 aa11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 PCDHGA8Q9Y5G5 932 aa11.13□□□□□ -0.63
SPTLC1P4-201ENST00000435997 ZNF462Q96JM2 2506 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 MGAQ8IWI9 3026 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 DOCK9Q9BZ29 2069 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 MYLKQ15746 1914 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 C2CD4BA6NLJ0 364 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 CDRT15L2A8MXV6 281 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 FAM72CH0Y354 149 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 GOLGA8SH3BPF8 625 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 FPGTO14772 594 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 LRIG2O94898 1065 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 RHOQP17081 205 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 JUNDP17535 347 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 ERCC5P28715 1186 aaPredicted RBP11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 ADRA1BP35368 520 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 IGFALSP35858 605 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 PTPN9P43378 593 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 UCNP55089 124 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 HDAC4P56524 1084 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 GEMIN4P57678 1058 aaKnown RBP11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 TMPRSS3P57727 454 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 CXADRP78310 365 aa11.12□□□□□ -0.63
SPTLC1P4-201ENST00000435997 FMO1Q01740 532 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms