RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 ACVR1CQ8NER5 493 aa19.81■□□□□ 0.76
VRK2-205ENST00000432057 RFWD2Q8NHY2 731 aa19.81■□□□□ 0.76
VRK2-205ENST00000432057 VPS39Q96JC1 886 aa19.81■□□□□ 0.76
VRK2-205ENST00000432057 RXFP1Q9HBX9 757 aa19.81■□□□□ 0.76
VRK2-205ENST00000432057 ARNT2Q9HBZ2 717 aa19.81■□□□□ 0.76
VRK2-205ENST00000432057 SMPD4Q9NXE4 827 aa19.81■□□□□ 0.76
VRK2-205ENST00000432057 ACTL7AQ9Y615 435 aa19.81■□□□□ 0.76
VRK2-205ENST00000432057 TEX28O15482 410 aa19.8■□□□□ 0.76
VRK2-205ENST00000432057 TSPAN3O60637 253 aa19.8■□□□□ 0.76
VRK2-205ENST00000432057 SPATA31D3P0C874 917 aa19.8■□□□□ 0.76
VRK2-205ENST00000432057 ARNTP27540 789 aa19.8■□□□□ 0.76
VRK2-205ENST00000432057 CA8P35219 290 aa19.8■□□□□ 0.76
VRK2-205ENST00000432057 EPHB3P54753 998 aa19.8■□□□□ 0.76
VRK2-205ENST00000432057 BST1Q10588 318 aa19.8■□□□□ 0.76
VRK2-205ENST00000432057 STXBP5Q5T5C0 1151 aa19.8■□□□□ 0.76
VRK2-205ENST00000432057 SPATA31D4Q6ZUB0 917 aa19.8■□□□□ 0.76
VRK2-205ENST00000432057 TRIM42Q8IWZ5 723 aa19.8■□□□□ 0.76
VRK2-205ENST00000432057 PPM1EQ8WY54 764 aa19.8■□□□□ 0.76
VRK2-205ENST00000432057 E2F7Q96AV8 911 aa19.8■□□□□ 0.76
VRK2-205ENST00000432057 TADA1Q96BN2 335 aa19.8■□□□□ 0.76
VRK2-205ENST00000432057 SEMA3CQ99985 751 aa19.8■□□□□ 0.76
VRK2-205ENST00000432057 MAGEH1Q9H213 219 aa19.8■□□□□ 0.76
VRK2-205ENST00000432057 TRPC7Q9HCX4 862 aa19.8■□□□□ 0.76
VRK2-205ENST00000432057 TREX1Q9NSU2 369 aa19.8■□□□□ 0.76
VRK2-205ENST00000432057 NSMCE4AQ9NXX6 385 aa19.8■□□□□ 0.76
VRK2-205ENST00000432057 UXTQ9UBK9 157 aaPredicted RBP19.8■□□□□ 0.76
VRK2-205ENST00000432057 DCDC2Q9UHG0 476 aa19.8■□□□□ 0.76
VRK2-205ENST00000432057 AGO1Q9UL18 857 aaKnown RBP19.8■□□□□ 0.76
VRK2-205ENST00000432057 TIMM44O43615 452 aa19.79■□□□□ 0.76
VRK2-205ENST00000432057 PLIN3O60664 434 aa19.79■□□□□ 0.76
VRK2-205ENST00000432057 PRKCGP05129 697 aa19.79■□□□□ 0.76
VRK2-205ENST00000432057 GSTA1P08263 222 aa19.79■□□□□ 0.76
VRK2-205ENST00000432057 ARCN1P48444 511 aaKnown RBP19.79■□□□□ 0.76
VRK2-205ENST00000432057 SERPINH1P50454 418 aaKnown RBP19.79■□□□□ 0.76
VRK2-205ENST00000432057 TMPRSS15P98073 1019 aa19.79■□□□□ 0.76
VRK2-205ENST00000432057 GRM3Q14832 879 aa19.79■□□□□ 0.76
VRK2-205ENST00000432057 DLG2Q15700 870 aa19.79■□□□□ 0.76
VRK2-205ENST00000432057 CNGA3Q16281 694 aa19.79■□□□□ 0.76
VRK2-205ENST00000432057 GALNTL6Q49A17 601 aa19.79■□□□□ 0.76
VRK2-205ENST00000432057 CNPY4Q8N129 248 aa19.79■□□□□ 0.76
VRK2-205ENST00000432057 POLR1EQ9GZS1 481 aaKnown RBP19.79■□□□□ 0.76
VRK2-205ENST00000432057 ZNF358Q9NW07 568 aa19.79■□□□□ 0.76
VRK2-205ENST00000432057 DCTN4Q9UJW0 460 aa19.79■□□□□ 0.76
VRK2-205ENST00000432057 HELZP42694 1942 aaKnown RBP19.79■□□□□ 0.76
VRK2-205ENST00000432057 BIRC5O15392 142 aa19.79■□□□□ 0.76
VRK2-205ENST00000432057 GSRP00390 522 aa19.79■□□□□ 0.76
VRK2-205ENST00000432057 IL1BP01584 269 aa19.79■□□□□ 0.76
VRK2-205ENST00000432057 MBL2P11226 248 aaPredicted RBP19.79■□□□□ 0.76
VRK2-205ENST00000432057 GLDCP23378 1020 aa19.79■□□□□ 0.76
VRK2-205ENST00000432057 PPM1AP35813 382 aa19.79■□□□□ 0.76
VRK2-205ENST00000432057 MPP1Q00013 466 aa19.79■□□□□ 0.76
VRK2-205ENST00000432057 SIRPB2Q5JXA9 342 aa19.79■□□□□ 0.76
VRK2-205ENST00000432057 IL31Q6EBC2 164 aa19.79■□□□□ 0.76
VRK2-205ENST00000432057 KIAA0930Q6ICG6 404 aaPredicted RBP19.79■□□□□ 0.76
VRK2-205ENST00000432057 ZC3HC1Q86WB0 502 aaKnown RBP19.79■□□□□ 0.76
VRK2-205ENST00000432057 DENND6AQ8IWF6 608 aa19.79■□□□□ 0.76
VRK2-205ENST00000432057 CNTN4Q8IWV2 1026 aa19.79■□□□□ 0.76
VRK2-205ENST00000432057 SLC22A12Q96S37 553 aa19.79■□□□□ 0.76
VRK2-205ENST00000432057 SPON2Q9BUD6 331 aa19.79■□□□□ 0.76
VRK2-205ENST00000432057 TMEM216Q9P0N5 145 aa19.79■□□□□ 0.76
VRK2-205ENST00000432057 CHKBQ9Y259 395 aa19.79■□□□□ 0.76
VRK2-205ENST00000432057 ZBBXA8MT70 800 aa19.78■□□□□ 0.76
VRK2-205ENST00000432057 SCAMP3O14828 347 aaKnown RBP19.78■□□□□ 0.76
VRK2-205ENST00000432057 CLDN11O75508 207 aa19.78■□□□□ 0.76
VRK2-205ENST00000432057 BAIAP3O94812 1187 aa19.78■□□□□ 0.76
VRK2-205ENST00000432057 PROCP04070 461 aa19.78■□□□□ 0.76
VRK2-205ENST00000432057 IRF9Q00978 393 aa19.78■□□□□ 0.76
VRK2-205ENST00000432057 FASTKD1Q53R41 847 aaKnown RBP19.78■□□□□ 0.76
VRK2-205ENST00000432057 ADGRF1Q5T601 910 aa19.78■□□□□ 0.76
VRK2-205ENST00000432057 ATG16L1Q676U5 607 aa19.78■□□□□ 0.76
VRK2-205ENST00000432057 ZCCHC23Q6ZST2 131 aa19.78■□□□□ 0.76
VRK2-205ENST00000432057 C16orf59Q7L2K0 433 aa19.78■□□□□ 0.76
VRK2-205ENST00000432057 NECAB2Q7Z6G3 386 aa19.78■□□□□ 0.76
VRK2-205ENST00000432057 PLD6Q8N2A8 252 aaKnown RBP19.78■□□□□ 0.76
VRK2-205ENST00000432057 ZFRQ96KR1 1074 aaKnown RBP19.78■□□□□ 0.76
VRK2-205ENST00000432057 ZNF599Q96NL3 588 aa19.78■□□□□ 0.76
VRK2-205ENST00000432057 CYP2S1Q96SQ9 504 aa19.78■□□□□ 0.76
VRK2-205ENST00000432057 GPR22Q99680 433 aa19.78■□□□□ 0.76
VRK2-205ENST00000432057 TRIM55Q9BYV6 548 aa19.78■□□□□ 0.76
VRK2-205ENST00000432057 PRKD2Q9BZL6 878 aa19.78■□□□□ 0.76
VRK2-205ENST00000432057 ZBP1Q9H171 429 aa19.78■□□□□ 0.76
VRK2-205ENST00000432057 MYLK2Q9H1R3 596 aa19.78■□□□□ 0.76
VRK2-205ENST00000432057 HEATR9A2RTY3 570 aa19.77■□□□□ 0.76
VRK2-205ENST00000432057 LILRB3O75022 631 aa19.77■□□□□ 0.76
VRK2-205ENST00000432057 FGF18O76093 207 aa19.77■□□□□ 0.76
VRK2-205ENST00000432057 F11P03951 625 aa19.77■□□□□ 0.76
VRK2-205ENST00000432057 RHOCP08134 193 aa19.77■□□□□ 0.76
VRK2-205ENST00000432057 ATXN1LP0C7T5 689 aaKnown RBP19.77■□□□□ 0.76
VRK2-205ENST00000432057 PAMP19021 973 aa19.77■□□□□ 0.76
VRK2-205ENST00000432057 GABRB3P28472 473 aa19.77■□□□□ 0.76
VRK2-205ENST00000432057 SLC1A2P43004 574 aa19.77■□□□□ 0.76
VRK2-205ENST00000432057 PPP3CCP48454 512 aa19.77■□□□□ 0.76
VRK2-205ENST00000432057 OXCT1P55809 520 aa19.77■□□□□ 0.76
VRK2-205ENST00000432057 CCDC15Q0P6D6 951 aa19.77■□□□□ 0.76
VRK2-205ENST00000432057 CTBP1Q13363 440 aa19.77■□□□□ 0.76
VRK2-205ENST00000432057 MSLNQ13421 630 aaPredicted RBP19.77■□□□□ 0.76
VRK2-205ENST00000432057 PCLAFQ15004 111 aa19.77■□□□□ 0.76
VRK2-205ENST00000432057 INSCQ1MX18 579 aa19.77■□□□□ 0.76
VRK2-205ENST00000432057 GBP7Q8N8V2 638 aaPredicted RBP19.77■□□□□ 0.76
VRK2-205ENST00000432057 RANBP9Q96S59 729 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms