RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 MTA2O94776 668 aa16.62■□□□□ 0.25
RIF1-204ENST00000430328 TSPAN5P62079 268 aa16.62■□□□□ 0.25
RIF1-204ENST00000430328 EGFLAMQ63HQ2 1017 aa16.62■□□□□ 0.25
RIF1-204ENST00000430328 DGLUCYQ7Z3D6 616 aa16.62■□□□□ 0.25
RIF1-204ENST00000430328 OR10H5Q8NGA6 315 aa16.62■□□□□ 0.25
RIF1-204ENST00000430328 DHRS1Q96LJ7 313 aa16.62■□□□□ 0.25
RIF1-204ENST00000430328 FAIM2Q9BWQ8 316 aa16.62■□□□□ 0.25
RIF1-204ENST00000430328 MLH3Q9UHC1 1453 aa16.62■□□□□ 0.25
RIF1-204ENST00000430328 H3BNH8 94 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 SPTLC1O15269 473 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 MYBP10242 640 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 USP41Q3LFD5 358 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 ANKFN1Q8N957 763 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 BTN3A1O00481 513 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 SLC6A2P23975 617 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 CYP4F8P98187 520 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 FOLH1Q04609 750 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 CCNG2Q16589 344 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 ERFEQ4G0M1 354 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 PRRG4Q9BZD6 226 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 TREM1Q9NP99 234 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 FLT1P17948 1338 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 LOC102724428A0A0B4J2F2 783 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 H7C2Y5 167 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 TBX3O15119 743 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 ITGB3P05106 788 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 CKMP06732 381 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 NR2C2P49116 596 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 SIK1P57059 783 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 CUL2Q13617 745 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 SLC25A25Q6KCM7 469 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 BTBD19C9JJ37 291 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 MBL2P11226 248 aaPredicted RBP16.61■□□□□ 0.25
RIF1-204ENST00000430328 AP2S1P53680 142 aaPredicted RBP16.61■□□□□ 0.25
RIF1-204ENST00000430328 QRICH1Q2TAL8 776 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 GLT6D1Q7Z4J2 308 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 CDYL2Q8N8U2 506 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 ZSWIM2Q8NEG5 633 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 CAVIN3Q969G5 261 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 CNPPD1Q9BV87 410 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 PLEKHA1Q9HB21 404 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 C5orf51A6NDU8 294 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 OGTO15294 1046 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 CBX6O95503 412 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 CES1P23141 567 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 BUD31P41223 144 aaPredicted RBP16.61■□□□□ 0.25
RIF1-204ENST00000430328 METTL16Q86W50 562 aaKnown RBP16.61■□□□□ 0.25
RIF1-204ENST00000430328 POF1BQ8WVV4 589 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 RAD51AP1Q96B01 352 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 TRIM43Q96BQ3 446 aaPredicted RBP16.61■□□□□ 0.25
RIF1-204ENST00000430328 CSH1P0DML2 217 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 CSH2P0DML3 217 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 MCL1Q07820 350 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 CBWD6Q4V339 395 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 DALRD3Q5D0E6 543 aaKnown RBP16.61■□□□□ 0.25
RIF1-204ENST00000430328 CYP4X1Q8N118 509 aa16.61■□□□□ 0.25
RIF1-204ENST00000430328 IFI30P13284 250 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 IGFALSP35858 605 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 TMEM62Q0P6H9 643 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 PAPD7Q5XG87 772 aaKnown RBP16.6■□□□□ 0.25
RIF1-204ENST00000430328 CXorf57Q6NSI4 855 aaKnown RBP16.6■□□□□ 0.25
RIF1-204ENST00000430328 CYB5R4Q7L1T6 521 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 TC2NQ8N9U0 490 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 SELENOMQ8WWX9 145 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 ACAT2Q9BWD1 397 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 FAM126AQ9BYI3 521 aaPredicted RBP16.6■□□□□ 0.25
RIF1-204ENST00000430328 A0A096LPK6 155 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 TRIM64BA6NI03 449 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 CCNDBP1O95273 360 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 JCHAINP01591 159 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 CTSHP09668 335 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 HOXB6P17509 224 aaKnown RBP16.6■□□□□ 0.25
RIF1-204ENST00000430328 RRM1P23921 792 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 SCNN1BP51168 640 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 MLLT6P55198 1093 aaPredicted RBP16.6■□□□□ 0.25
RIF1-204ENST00000430328 RGS8P57771 180 aaPredicted RBP16.6■□□□□ 0.25
RIF1-204ENST00000430328 SLC10A7Q0GE19 358 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 CHST15Q7LFX5 561 aaPredicted RBP16.6■□□□□ 0.25
RIF1-204ENST00000430328 ZBTB46Q86UZ6 589 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 PPP1R13LQ8WUF5 828 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 CHIAQ9BZP6 476 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 F5H6K3 240 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 DHX15O43143 795 aaKnown RBP16.6■□□□□ 0.25
RIF1-204ENST00000430328 CYP2C9P11712 490 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 PRLRP16471 622 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 NR4A1P22736 598 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 PITPNAQ00169 270 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 KLRC3Q07444 240 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 TTMPQ5BVD1 217 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 RTL4Q6ZR62 310 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 SETD6Q8TBK2 473 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 PCDHA3Q9Y5H8 950 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 MATN2O00339 956 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 SLC30A4O14863 429 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 ETS2P15036 469 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 SQLEQ14534 574 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 NELL1Q92832 810 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 CIPCQ9C0C6 399 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 ATXN3LQ9H3M9 355 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 ARL15Q9NXU5 204 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms