RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 JRKLQ9Y4A0 524 aa22.65■■□□□ 1.22
PTPN18-205ENST00000428843 A0A1W2PP55 124 aa22.64■■□□□ 1.21
PTPN18-205ENST00000428843 KRIT1O00522 736 aa22.64■■□□□ 1.21
PTPN18-205ENST00000428843 ENC1O14682 589 aa22.64■■□□□ 1.21
PTPN18-205ENST00000428843 INSIG1O15503 277 aa22.64■■□□□ 1.21
PTPN18-205ENST00000428843 IGLV3-19P01714 112 aa22.64■■□□□ 1.21
PTPN18-205ENST00000428843 CCNB1P14635 433 aa22.64■■□□□ 1.21
PTPN18-205ENST00000428843 MMP13P45452 471 aa22.64■■□□□ 1.21
PTPN18-205ENST00000428843 RENBPP51606 427 aa22.64■■□□□ 1.21
PTPN18-205ENST00000428843 ZNF33AQ06730 810 aa22.64■■□□□ 1.21
PTPN18-205ENST00000428843 BBS5Q8N3I7 341 aa22.64■■□□□ 1.21
PTPN18-205ENST00000428843 PGBD5Q8N414 524 aa22.64■■□□□ 1.21
PTPN18-205ENST00000428843 AADATQ8N5Z0 425 aa22.64■■□□□ 1.21
PTPN18-205ENST00000428843 VOPP1Q96AW1 172 aa22.64■■□□□ 1.21
PTPN18-205ENST00000428843 ZNF419Q96HQ0 510 aaPredicted RBP22.64■■□□□ 1.21
PTPN18-205ENST00000428843 CARD9Q9H257 536 aa22.64■■□□□ 1.21
PTPN18-205ENST00000428843 SERGEFQ9UGK8 458 aa22.64■■□□□ 1.21
PTPN18-205ENST00000428843 MBD1Q9UIS9 605 aaPredicted RBP22.64■■□□□ 1.21
PTPN18-205ENST00000428843 KPNA3O00505 521 aaPredicted RBP22.63■■□□□ 1.21
PTPN18-205ENST00000428843 BCKDHBP21953 392 aa22.63■■□□□ 1.21
PTPN18-205ENST00000428843 DRD3P35462 400 aa22.63■■□□□ 1.21
PTPN18-205ENST00000428843 CSNK1DP48730 415 aa22.63■■□□□ 1.21
PTPN18-205ENST00000428843 OTUD4Q01804 1114 aaKnown RBP22.63■■□□□ 1.21
PTPN18-205ENST00000428843 RAD51Q06609 339 aa22.63■■□□□ 1.21
PTPN18-205ENST00000428843 NSUN2Q08J23 767 aaKnown RBP eCLIP22.63■■□□□ 1.21
PTPN18-205ENST00000428843 NOMO1Q15155 1222 aa22.63■■□□□ 1.21
PTPN18-205ENST00000428843 FAM124AQ86V42 546 aa22.63■■□□□ 1.21
PTPN18-205ENST00000428843 ZC3H18Q86VM9 953 aaKnown RBP22.63■■□□□ 1.21
PTPN18-205ENST00000428843 HDDC3Q8N4P3 179 aa22.63■■□□□ 1.21
PTPN18-205ENST00000428843 GANCQ8TET4 914 aa22.63■■□□□ 1.21
PTPN18-205ENST00000428843 TFB1MQ8WVM0 346 aaKnown RBP22.63■■□□□ 1.21
PTPN18-205ENST00000428843 OMDQ99983 421 aa22.63■■□□□ 1.21
PTPN18-205ENST00000428843 MGME1Q9BQP7 344 aa22.63■■□□□ 1.21
PTPN18-205ENST00000428843 NT5MQ9NPB1 228 aa22.63■■□□□ 1.21
PTPN18-205ENST00000428843 KCND1Q9NSA2 647 aa22.63■■□□□ 1.21
PTPN18-205ENST00000428843 RBM22Q9NW64 420 aaKnown RBP eCLIP22.63■■□□□ 1.21
PTPN18-205ENST00000428843 FBXL12Q9NXK8 326 aa22.63■■□□□ 1.21
PTPN18-205ENST00000428843 ANKRD36A6QL64 1941 aa22.63■■□□□ 1.21
PTPN18-205ENST00000428843 TCRBV7S2A1N4TA0A589 114 aa22.62■■□□□ 1.21
PTPN18-205ENST00000428843 KCNK1O00180 336 aa22.62■■□□□ 1.21
PTPN18-205ENST00000428843 PLK4O00444 970 aa22.62■■□□□ 1.21
PTPN18-205ENST00000428843 GJB3O75712 270 aa22.62■■□□□ 1.21
PTPN18-205ENST00000428843 MSNP26038 577 aaKnown RBP22.62■■□□□ 1.21
PTPN18-205ENST00000428843 HSPA9P38646 679 aaKnown RBP22.62■■□□□ 1.21
PTPN18-205ENST00000428843 KLF1Q13351 362 aaPredicted RBP22.62■■□□□ 1.21
PTPN18-205ENST00000428843 PRKD1Q15139 912 aaPredicted RBP22.62■■□□□ 1.21
PTPN18-205ENST00000428843 USP30Q70CQ3 517 aa22.62■■□□□ 1.21
PTPN18-205ENST00000428843 CEP68Q76N32 757 aa22.62■■□□□ 1.21
PTPN18-205ENST00000428843 SRLQ86TD4 932 aa22.62■■□□□ 1.21
PTPN18-205ENST00000428843 C17orf53Q8N3J3 647 aaPredicted RBP22.62■■□□□ 1.21
PTPN18-205ENST00000428843 ACTL9Q8TC94 416 aa22.62■■□□□ 1.21
PTPN18-205ENST00000428843 ARRDC3Q96B67 414 aa22.62■■□□□ 1.21
PTPN18-205ENST00000428843 LRIG1Q96JA1 1093 aa22.62■■□□□ 1.21
PTPN18-205ENST00000428843 NEUROG2Q9H2A3 272 aa22.62■■□□□ 1.21
PTPN18-205ENST00000428843 NCKAP1Q9Y2A7 1128 aa22.62■■□□□ 1.21
PTPN18-205ENST00000428843 CACNA1HO95180 2353 aa22.62■■□□□ 1.21
PTPN18-205ENST00000428843 TTC24A2A3L6 582 aaPredicted RBP22.61■■□□□ 1.21
PTPN18-205ENST00000428843 HACD1B0YJ81 288 aa22.61■■□□□ 1.21
PTPN18-205ENST00000428843 RNASEH2AO75792 299 aaKnown RBP22.61■■□□□ 1.21
PTPN18-205ENST00000428843 JCHAINP01591 159 aa22.61■■□□□ 1.21
PTPN18-205ENST00000428843 CD6P30203 668 aa22.61■■□□□ 1.21
PTPN18-205ENST00000428843 OXTRP30559 389 aa22.61■■□□□ 1.21
PTPN18-205ENST00000428843 CXCR5P32302 372 aa22.61■■□□□ 1.21
PTPN18-205ENST00000428843 NBL1P41271 181 aa22.61■■□□□ 1.21
PTPN18-205ENST00000428843 SCNN1BP51168 640 aa22.61■■□□□ 1.21
PTPN18-205ENST00000428843 MAXP61244 160 aa22.61■■□□□ 1.21
PTPN18-205ENST00000428843 IFI35P80217 286 aaPredicted RBP22.61■■□□□ 1.21
PTPN18-205ENST00000428843 SFSWAPQ12872 951 aaKnown RBP22.61■■□□□ 1.21
PTPN18-205ENST00000428843 ZBTB17Q13105 803 aa22.61■■□□□ 1.21
PTPN18-205ENST00000428843 XRCC4Q13426 336 aa22.61■■□□□ 1.21
PTPN18-205ENST00000428843 SIM2Q14190 667 aaPredicted RBP22.61■■□□□ 1.21
PTPN18-205ENST00000428843 KBTBD6Q86V97 674 aa22.61■■□□□ 1.21
PTPN18-205ENST00000428843 TOE1Q96GM8 510 aaKnown RBP22.61■■□□□ 1.21
PTPN18-205ENST00000428843 QKIQ96PU8 341 aaKnown RBP eCLIP22.61■■□□□ 1.21
PTPN18-205ENST00000428843 IL12RB2Q99665 862 aa22.61■■□□□ 1.21
PTPN18-205ENST00000428843 FAM118BQ9BPY3 351 aa22.61■■□□□ 1.21
PTPN18-205ENST00000428843 CPEB1Q9BZB8 566 aaKnown RBP22.61■■□□□ 1.21
PTPN18-205ENST00000428843 WSB2Q9NYS7 404 aaPredicted RBP22.61■■□□□ 1.21
PTPN18-205ENST00000428843 SEPT10Q9P0V9 454 aa22.61■■□□□ 1.21
PTPN18-205ENST00000428843 ARIH1Q9Y4X5 557 aaPredicted RBP22.61■■□□□ 1.21
PTPN18-205ENST00000428843 MUC6Q6W4X9 2439 aa22.61■■□□□ 1.21
PTPN18-205ENST00000428843 CEP192Q8TEP8 1941 aa22.61■■□□□ 1.21
PTPN18-205ENST00000428843 NUMA1Q14980 2115 aa22.6■■□□□ 1.21
PTPN18-205ENST00000428843 ABCA7Q8IZY2 2146 aa22.6■■□□□ 1.21
PTPN18-205ENST00000428843 THADAQ6YHU6 1953 aa22.6■■□□□ 1.21
PTPN18-205ENST00000428843 H7C0C1 242 aa22.6■■□□□ 1.21
PTPN18-205ENST00000428843 MAP3K13O43283 966 aa22.6■■□□□ 1.21
PTPN18-205ENST00000428843 NEBLO76041 1014 aa22.6■■□□□ 1.21
PTPN18-205ENST00000428843 PIGNO95427 931 aa22.6■■□□□ 1.21
PTPN18-205ENST00000428843 ATP1A1P05023 1023 aaKnown RBP22.6■■□□□ 1.21
PTPN18-205ENST00000428843 UGT2B4P06133 528 aa22.6■■□□□ 1.21
PTPN18-205ENST00000428843 CR2P20023 1033 aa22.6■■□□□ 1.21
PTPN18-205ENST00000428843 ATP5OP48047 213 aa22.6■■□□□ 1.21
PTPN18-205ENST00000428843 EIF3EP60228 445 aaKnown RBP22.6■■□□□ 1.21
PTPN18-205ENST00000428843 CNTN1Q12860 1018 aa22.6■■□□□ 1.21
PTPN18-205ENST00000428843 SLC45A4Q5BKX6 768 aa22.6■■□□□ 1.21
PTPN18-205ENST00000428843 FAM182AQ5T1J6 154 aa22.6■■□□□ 1.21
PTPN18-205ENST00000428843 GDPD4Q6W3E5 623 aa22.6■■□□□ 1.21
PTPN18-205ENST00000428843 SLC36A4Q6YBV0 504 aa22.6■■□□□ 1.21
PTPN18-205ENST00000428843 PRR23BQ6ZRT6 265 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms