RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 ZDHHC6Q9H6R6 413 aa15.8■□□□□ 0.12
SEC13-210ENST00000428626 SCUBE2Q9NQ36 999 aa15.8■□□□□ 0.12
SEC13-210ENST00000428626 HECAQ9UBI9 543 aaPredicted RBP15.8■□□□□ 0.12
SEC13-210ENST00000428626 ITM2BQ9Y287 266 aa15.8■□□□□ 0.12
SEC13-210ENST00000428626 U3KQA8 63 aa15.8■□□□□ 0.12
SEC13-210ENST00000428626 PLEKP08567 350 aaPredicted RBP15.79■□□□□ 0.12
SEC13-210ENST00000428626 MAPKAPK2P49137 400 aa15.79■□□□□ 0.12
SEC13-210ENST00000428626 GSCP56915 257 aaPredicted RBP15.79■□□□□ 0.12
SEC13-210ENST00000428626 MAPK8IP2Q13387 824 aaPredicted RBP15.79■□□□□ 0.12
SEC13-210ENST00000428626 FZD2Q14332 565 aa15.79■□□□□ 0.12
SEC13-210ENST00000428626 CLEC16AQ2KHT3 1053 aa15.79■□□□□ 0.12
SEC13-210ENST00000428626 ATXN7L2Q5T6C5 722 aaPredicted RBP15.79■□□□□ 0.12
SEC13-210ENST00000428626 PHF13Q86YI8 300 aaPredicted RBP15.79■□□□□ 0.12
SEC13-210ENST00000428626 OR4C6Q8NH72 309 aa15.79■□□□□ 0.12
SEC13-210ENST00000428626 RFFLQ8WZ73 363 aa15.79■□□□□ 0.12
SEC13-210ENST00000428626 BAP1Q92560 729 aa15.79■□□□□ 0.12
SEC13-210ENST00000428626 ISG20Q96AZ6 181 aaKnown RBP15.79■□□□□ 0.12
SEC13-210ENST00000428626 PPP1R16AQ96I34 528 aa15.79■□□□□ 0.12
SEC13-210ENST00000428626 LRIG1Q96JA1 1093 aa15.79■□□□□ 0.12
SEC13-210ENST00000428626 ADAM22Q9P0K1 906 aa15.79■□□□□ 0.12
SEC13-210ENST00000428626 KLF15Q9UIH9 416 aa15.79■□□□□ 0.12
SEC13-210ENST00000428626 IGLON5A6NGN9 336 aa15.78■□□□□ 0.12
SEC13-210ENST00000428626 C16orf96A6NNT2 1141 aa15.78■□□□□ 0.12
SEC13-210ENST00000428626 AP1G1O43747 822 aa15.78■□□□□ 0.12
SEC13-210ENST00000428626 NEBLO76041 1014 aa15.78■□□□□ 0.12
SEC13-210ENST00000428626 CDK4P11802 303 aa15.78■□□□□ 0.12
SEC13-210ENST00000428626 KRT3P12035 628 aa15.78■□□□□ 0.12
SEC13-210ENST00000428626 ITPKBP27987 946 aa15.78■□□□□ 0.12
SEC13-210ENST00000428626 HNF1BP35680 557 aa15.78■□□□□ 0.12
SEC13-210ENST00000428626 STAT1P42224 750 aa15.78■□□□□ 0.12
SEC13-210ENST00000428626 CCDC15Q0P6D6 951 aa15.78■□□□□ 0.12
SEC13-210ENST00000428626 ILKQ13418 452 aa15.78■□□□□ 0.12
SEC13-210ENST00000428626 NCAPHQ15003 741 aa15.78■□□□□ 0.12
SEC13-210ENST00000428626 ARL13BQ3SXY8 428 aa15.78■□□□□ 0.12
SEC13-210ENST00000428626 LRRC73Q5JTD7 316 aa15.78■□□□□ 0.12
SEC13-210ENST00000428626 TRIM72Q6ZMU5 477 aa15.78■□□□□ 0.12
SEC13-210ENST00000428626 MON1BQ7L1V2 547 aa15.78■□□□□ 0.12
SEC13-210ENST00000428626 TMC6Q7Z403 805 aa15.78■□□□□ 0.12
SEC13-210ENST00000428626 PTAR1Q7Z6K3 402 aaPredicted RBP15.78■□□□□ 0.12
SEC13-210ENST00000428626 PLPP6Q8IY26 295 aa15.78■□□□□ 0.12
SEC13-210ENST00000428626 NTAN1Q96AB6 310 aa15.78■□□□□ 0.12
SEC13-210ENST00000428626 NXPE2Q96DL1 559 aa15.78■□□□□ 0.12
SEC13-210ENST00000428626 TBC1D31Q96DN5 1066 aa15.78■□□□□ 0.12
SEC13-210ENST00000428626 C1QTNF2Q9BXJ5 285 aa15.78■□□□□ 0.12
SEC13-210ENST00000428626 MAGEH1Q9H213 219 aa15.78■□□□□ 0.12
SEC13-210ENST00000428626 LIMA1Q9UHB6 759 aaKnown RBP15.78■□□□□ 0.12
SEC13-210ENST00000428626 PNMA8BQ9ULN7 279 aaPredicted RBP15.78■□□□□ 0.12
SEC13-210ENST00000428626 HS3ST3A1Q9Y663 406 aa15.78■□□□□ 0.12
SEC13-210ENST00000428626 A6NNZ2 444 aa15.77■□□□□ 0.12
SEC13-210ENST00000428626 LGALS16A8MUM7 142 aa15.77■□□□□ 0.12
SEC13-210ENST00000428626 CCP110O43303 1012 aa15.77■□□□□ 0.12
SEC13-210ENST00000428626 UGT2B4P06133 528 aa15.77■□□□□ 0.12
SEC13-210ENST00000428626 ITIH2P19823 946 aa15.77■□□□□ 0.12
SEC13-210ENST00000428626 RPL7AP62424 266 aaKnown RBP15.77■□□□□ 0.12
SEC13-210ENST00000428626 RPS21P63220 83 aaKnown RBP15.77■□□□□ 0.12
SEC13-210ENST00000428626 SEMG2Q02383 582 aa15.77■□□□□ 0.12
SEC13-210ENST00000428626 RTP5Q14D33 572 aa15.77■□□□□ 0.12
SEC13-210ENST00000428626 FKBP15Q5T1M5 1219 aa15.77■□□□□ 0.12
SEC13-210ENST00000428626 KIAA1161Q6NSJ0 714 aa15.77■□□□□ 0.12
SEC13-210ENST00000428626 KYAT3Q6YP21 454 aaKnown RBP15.77■□□□□ 0.12
SEC13-210ENST00000428626 DCBLD1Q8N8Z6 715 aa15.77■□□□□ 0.12
SEC13-210ENST00000428626 C3orf20Q8ND61 904 aa15.77■□□□□ 0.12
SEC13-210ENST00000428626 OR2AP1Q8NGE2 309 aa15.77■□□□□ 0.12
SEC13-210ENST00000428626 FEM1CQ96JP0 617 aa15.77■□□□□ 0.12
SEC13-210ENST00000428626 DCBLD2Q96PD2 775 aa15.77■□□□□ 0.12
SEC13-210ENST00000428626 DNAJC28Q9NX36 388 aa15.77■□□□□ 0.12
SEC13-210ENST00000428626 COL27A1Q8IZC6 1860 aaPredicted RBP15.77■□□□□ 0.11
SEC13-210ENST00000428626 SPTY2D1-AS1A0A0U1RR47 76 aa15.76■□□□□ 0.11
SEC13-210ENST00000428626 CXorf51AA0A1B0GTR3 108 aa15.76■□□□□ 0.11
SEC13-210ENST00000428626 LRRC10BA6NIK2 292 aa15.76■□□□□ 0.11
SEC13-210ENST00000428626 SIGLEC16A6NMB1 481 aa15.76■□□□□ 0.11
SEC13-210ENST00000428626 KRIT1O00522 736 aa15.76■□□□□ 0.11
SEC13-210ENST00000428626 AREL1O15033 823 aa15.76■□□□□ 0.11
SEC13-210ENST00000428626 KDELR3O43731 214 aa15.76■□□□□ 0.11
SEC13-210ENST00000428626 RAMP2O60895 175 aa15.76■□□□□ 0.11
SEC13-210ENST00000428626 GSRP00390 522 aa15.76■□□□□ 0.11
SEC13-210ENST00000428626 GPD1P21695 349 aa15.76■□□□□ 0.11
SEC13-210ENST00000428626 NSFP46459 744 aaKnown RBP15.76■□□□□ 0.11
SEC13-210ENST00000428626 OGDHQ02218 1023 aa15.76■□□□□ 0.11
SEC13-210ENST00000428626 POLD3Q15054 466 aaPredicted RBP15.76■□□□□ 0.11
SEC13-210ENST00000428626 MYLK3Q32MK0 819 aa15.76■□□□□ 0.11
SEC13-210ENST00000428626 ZNF805Q5CZA5 627 aa15.76■□□□□ 0.11
SEC13-210ENST00000428626 PPP1R15BQ5SWA1 713 aa15.76■□□□□ 0.11
SEC13-210ENST00000428626 RYBPQ8N488 228 aaPredicted RBP15.76■□□□□ 0.11
SEC13-210ENST00000428626 IFT43Q96FT9 208 aa15.76■□□□□ 0.11
SEC13-210ENST00000428626 APOLD1Q96LR9 279 aa15.76■□□□□ 0.11
SEC13-210ENST00000428626 KLHL32Q96NJ5 620 aa15.76■□□□□ 0.11
SEC13-210ENST00000428626 ERGIC2Q96RQ1 377 aa15.76■□□□□ 0.11
SEC13-210ENST00000428626 SELENOOQ9BVL4 669 aa15.76■□□□□ 0.11
SEC13-210ENST00000428626 NRSN2Q9GZP1 204 aa15.76■□□□□ 0.11
SEC13-210ENST00000428626 CLCA2Q9UQC9 943 aa15.76■□□□□ 0.11
SEC13-210ENST00000428626 PCDHB1Q9Y5F3 818 aa15.76■□□□□ 0.11
SEC13-210ENST00000428626 LRRK1Q38SD2 2015 aa15.75■□□□□ 0.11
SEC13-210ENST00000428626 RP1P56715 2156 aa15.75■□□□□ 0.11
SEC13-210ENST00000428626 K7ESM1 405 aa15.75■□□□□ 0.11
SEC13-210ENST00000428626 SCAMP1O15126 338 aa15.75■□□□□ 0.11
SEC13-210ENST00000428626 INSIG1O15503 277 aa15.75■□□□□ 0.11
SEC13-210ENST00000428626 TMCC1O94876 653 aa15.75■□□□□ 0.11
SEC13-210ENST00000428626 MT-CO3P00414 261 aa15.75■□□□□ 0.11
SEC13-210ENST00000428626 CSF2P04141 144 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms