RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 SOX13Q9UN79 622 aa9.2□□□□□ -0.94
NR1I3-209ENST00000428574 CHMP2BQ9UQN3 213 aa9.2□□□□□ -0.94
NR1I3-209ENST00000428574 KIF26AQ9ULI4 1882 aaPredicted RBP9.19□□□□□ -0.94
NR1I3-209ENST00000428574 NOTCH4Q99466 2003 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 TCRBV9S1A1TA0A576 114 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 HEATR9A2RTY3 570 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 FAM159BA6NKW6 160 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 H3BQF6 201 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 CBX4O00257 560 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 RGS16O15492 202 aaPredicted RBP9.19□□□□□ -0.94
NR1I3-209ENST00000428574 INSIG1O15503 277 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 SOCS5O75159 536 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 TMCC1O94876 653 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 CSPG5O95196 566 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 MMP2P08253 660 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 ALADP13716 330 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 PSMA3P25788 255 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 OAS2P29728 719 aaKnown RBP9.19□□□□□ -0.94
NR1I3-209ENST00000428574 CSKP41240 450 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 SERPINB9P50453 376 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 ARF5P84085 180 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 DNAJC3Q13217 504 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 EIF4HQ15056 248 aaKnown RBP9.19□□□□□ -0.94
NR1I3-209ENST00000428574 FSCBQ5H9T9 825 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 ZNF697Q5TEC3 545 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 DENND5AQ6IQ26 1287 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 UNC5AQ6ZN44 842 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 MTSS1LQ765P7 747 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 OTOP3Q7RTS5 596 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 LRRC6Q86X45 466 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 AHI1Q8N157 1196 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 MICALL1Q8N3F8 863 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 NETO2Q8NC67 525 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 OR52K1Q8NGK4 314 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 LRRN4Q8WUT4 740 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 CDKL2Q92772 493 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 MTBPQ96DY7 904 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 MRGPRX2Q96LB1 330 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 PWWP2AQ96N64 755 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 TUBGCP5Q96RT8 1024 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 SPON2Q9BUD6 331 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 BBS2Q9BXC9 721 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 S1PR5Q9H228 398 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 SSU72Q9NP77 194 aaKnown RBP9.19□□□□□ -0.94
NR1I3-209ENST00000428574 DUS2Q9NX74 493 aaKnown RBP9.19□□□□□ -0.94
NR1I3-209ENST00000428574 PSMC3IPQ9P2W1 217 aaPredicted RBP9.19□□□□□ -0.94
NR1I3-209ENST00000428574 GGA2Q9UJY4 613 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 MAD1L1Q9Y6D9 718 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.19□□□□□ -0.94
NR1I3-209ENST00000428574 FAM169AQ9Y6X4 670 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 CHD9Q3L8U1 2897 aa9.19□□□□□ -0.94
NR1I3-209ENST00000428574 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.18□□□□□ -0.94
NR1I3-209ENST00000428574 TIMM44O43615 452 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 RRP9O43818 475 aaKnown RBP9.18□□□□□ -0.94
NR1I3-209ENST00000428574 AVILO75366 819 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 ECI2O75521 394 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 NDST3O95803 873 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 CD160O95971 181 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 GSRP00390 522 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 C1QAP02745 245 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 SHBGP04278 402 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 CYP17A1P05093 508 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 SRPRAP08240 638 aaKnown RBP9.18□□□□□ -0.94
NR1I3-209ENST00000428574 ADH5P11766 374 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 PABPC1P11940 636 aaKnown RBP9.18□□□□□ -0.94
NR1I3-209ENST00000428574 TYRP14679 529 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 PAMP19021 973 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 FCARP24071 287 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 ADRA1DP25100 572 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 MZF1P28698 734 aaPredicted RBP9.18□□□□□ -0.94
NR1I3-209ENST00000428574 CD86P42081 329 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 RHOAP61586 193 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 PDE1BQ01064 536 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 CDK18Q07002 472 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 NIPAL4Q0D2K0 466 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 LMAN2Q12907 356 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 CRYMQ14894 314 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 DHCR24Q15392 516 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 CYTH1Q15438 398 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 SLC1A5Q15758 541 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 EML3Q32P44 896 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 PITRM1Q5JRX3 1037 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 FAM78AQ5JUQ0 283 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 LY6G5CQ5SRR4 150 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 LGSNQ5TDP6 509 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 PDPK2PQ6A1A2 396 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 ADGRD1Q6QNK2 874 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 MARK2Q7KZI7 788 aaKnown RBP9.18□□□□□ -0.94
NR1I3-209ENST00000428574 SLC26A11Q86WA9 606 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 TMEM25Q86YD3 366 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 ANKMY2Q8IV38 441 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 MFSD6LQ8IWD5 586 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 ETFBKMTQ8IXQ9 262 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 AGGF1Q8N302 714 aaeCLIP9.18□□□□□ -0.94
NR1I3-209ENST00000428574 PGBD5Q8N414 524 aa9.18□□□□□ -0.94
NR1I3-209ENST00000428574 TAB3Q8N5C8 712 aaPredicted RBP9.18□□□□□ -0.94
NR1I3-209ENST00000428574 PCDH20Q8N6Y1 951 aaKnown RBP9.18□□□□□ -0.94
NR1I3-209ENST00000428574 C12orf76Q8N812 135 aaPredicted RBP9.18□□□□□ -0.94
NR1I3-209ENST00000428574 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.18□□□□□ -0.94
NR1I3-209ENST00000428574 PPHLN1Q8NEY8 458 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms