RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 TRIM67Q6ZTA4 783 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 ZNF410Q86VK4 478 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 ERO1BQ86YB8 467 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 MYO1HQ8N1T3 1032 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 CPSF7Q8N684 471 aaKnown RBP7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 KDM1BQ8NB78 822 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 DRAXINQ8NBI3 349 aaPredicted RBP7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 GRIN3AQ8TCU5 1115 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 LENG1Q96BZ8 264 aaPredicted RBP7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 DCPSQ96C86 337 aaKnown RBP7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 PHF21BQ96EK2 531 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 CCT7Q99832 543 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 MROH8Q9H579 483 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 POMKQ9H5K3 350 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 PTTG2Q9NZH5 202 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 TRHDEQ9UKU6 1024 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 ANKRD6Q9Y2G4 727 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 PPP2R3BQ9Y5P8 575 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 PARP14Q460N5 1801 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 ATP6AP2A0A1C7CYW4 349 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 ARHGEF37A1IGU5 675 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 C9IYK1 514 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 TRIM38O00635 465 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 STRNO43815 780 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 PFDN1O60925 122 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 ATP6AP2O75787 350 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 LRIG2O94898 1065 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 RPL34P49207 117 aaKnown RBP7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 GJA9P57773 515 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 RAB10P61026 200 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 GPR162Q16538 588 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 PPP1R3AQ16821 1122 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 SV2CQ496J9 727 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 PITRM1Q5JRX3 1037 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 CNSTQ6PJW8 725 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 GPRIN1Q7Z2K8 1008 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 AHI1Q8N157 1196 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 CNTD1Q8N815 330 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 RDH11Q8TC12 318 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 HEXDCQ8WVB3 486 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 LPGAT1Q92604 370 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 DLG3Q92796 817 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 NT5C3BQ969T7 300 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 ZFRQ96KR1 1074 aaKnown RBP7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 FICDQ9BVA6 458 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 COLEC11Q9BWP8 271 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 ADAMTS10Q9H324 1103 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 LIN28AQ9H9Z2 209 aaKnown RBP7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 PRDM16Q9HAZ2 1276 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 WDR6Q9NNW5 1121 aaKnown RBP7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 NCKIPSDQ9NZQ3 722 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 FBXW11Q9UKB1 542 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 TLL2Q9Y6L7 1015 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 NUP205Q92621 2012 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 ANK1P16157 1881 aa7.62□□□□□ -1.19
SMARCC1-202ENST00000425518 PRSS51A0A1B0GVH4 220 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 ARHGAP10A1A4S6 786 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 C7orf72A4D263 438 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 ERI2A8K979 691 aaKnown RBP7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 SDHDO14521 159 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 ACOT8O14734 319 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 NCAM2O15394 837 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 PCSK6P29122 969 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 HADHAP40939 763 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 NME5P56597 212 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 PRAMEP78395 509 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 KRT80Q6KB66 452 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 PKN3Q6P5Z2 889 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 TXNDC5Q8NBS9 432 aaKnown RBP7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 DNAJB3Q8WWF6 145 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 ZFP42Q96MM3 310 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 CIB1Q99828 191 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 IL1RL2Q9HB29 575 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 GALNT8Q9NY28 637 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 MYBPHLA2RUH7 354 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 AURKAO14965 403 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 UBDO15205 165 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 MTSS1O43312 755 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 TADA2AO75478 443 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 CYP2C9P11712 490 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 CKMT2P17540 419 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 EPHX2P34913 555 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 NSUN2Q08J23 767 aaKnown RBP eCLIP7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 TRIM25Q14258 630 aaKnown RBP7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 FASTKQ14296 549 aaKnown RBP7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 KIAA0319Q5VV43 1072 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 ZNF470Q6ECI4 717 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 MAMDC4Q6UXC1 1216 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 MFSD6LQ8IWD5 586 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 TMEM102Q8N9M5 508 aaPredicted RBP7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 TSPAN14Q8NG11 270 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 TMIGD2Q96BF3 282 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 ZNF512Q96ME7 567 aaPredicted RBP7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 SLC39A3Q9BRY0 314 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 TMEM79Q9BSE2 394 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 MRPL46Q9H2W6 279 aaKnown RBP7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 NOL11Q9H8H0 719 aaKnown RBP7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 GDAP2Q9NXN4 497 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 MCM3APO60318 1980 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms