RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 VWCEQ96DN2 955 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 SMARCD1Q96GM5 515 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 SCYL1Q96KG9 808 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 TASP1Q9H6P5 420 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 COG4Q9H9E3 785 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 NMRAL1Q9HBL8 299 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 NDE1Q9NXR1 346 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 ADAM28Q9UKQ2 775 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 TANC1Q9C0D5 1861 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 A0A088AWK7 358 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.82□□□□□ -0.68
CUX1-205ENST00000425244 F8W8V4 182 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 MTSS1O43312 755 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 CPOXP36551 454 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 TUBP50607 506 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 AIF1P55008 147 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 AP2B1P63010 937 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 POU6F1Q14863 301 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 SLC39A12Q504Y0 691 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 C1orf53Q5VUE5 145 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 KCTD11Q693B1 232 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 CNKSR3Q6P9H4 555 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 KBTBD2Q8IY47 623 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 THEM5Q8N1Q8 247 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 SREK1Q8WXA9 508 aaKnown RBP10.82□□□□□ -0.68
CUX1-205ENST00000425244 HDAC11Q96DB2 347 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 SUSD3Q96L08 255 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 ELAC1Q9H777 363 aaKnown RBP10.82□□□□□ -0.68
CUX1-205ENST00000425244 DNAJC28Q9NX36 388 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 ZNF212Q9UDV6 495 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 TLK1Q9UKI8 766 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 TRHDEQ9UKU6 1024 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 PPM1HQ9ULR3 514 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 CORO1CQ9ULV4 474 aaPredicted RBP10.82□□□□□ -0.68
CUX1-205ENST00000425244 SORCS3Q9UPU3 1222 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 LRCH1Q9Y2L9 728 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 CDY1Q9Y6F8 540 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 CHD9Q3L8U1 2897 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 SHROOM3Q8TF72 1996 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 DPPA5A6NC42 116 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 TK2O00142 265 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 LIN7AO14910 233 aaPredicted RBP10.82□□□□□ -0.68
CUX1-205ENST00000425244 TIMM44O43615 452 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 MT-CYBP00156 380 aaPredicted RBP10.82□□□□□ -0.68
CUX1-205ENST00000425244 F9P00740 461 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 CCR10P46092 362 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 ALDH7A1P49419 539 aaKnown RBP10.82□□□□□ -0.68
CUX1-205ENST00000425244 HARS2P49590 506 aaKnown RBP10.82□□□□□ -0.68
CUX1-205ENST00000425244 USP10Q14694 798 aaKnown RBP10.82□□□□□ -0.68
CUX1-205ENST00000425244 GRM3Q14832 879 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 SLC9B1Q4ZJI4 515 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 TDRD5Q8NAT2 981 aaKnown RBP10.82□□□□□ -0.68
CUX1-205ENST00000425244 DRAXINQ8NBI3 349 aaPredicted RBP10.82□□□□□ -0.68
CUX1-205ENST00000425244 SCAMP5Q8TAC9 235 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 PYDC1Q8WXC3 89 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 TEKT5Q96M29 485 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 IL22Q9GZX6 179 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 STN1Q9H668 368 aaKnown RBP10.82□□□□□ -0.68
CUX1-205ENST00000425244 ABI2Q9NYB9 513 aaPredicted RBP10.82□□□□□ -0.68
CUX1-205ENST00000425244 PRKAG2Q9UGJ0 569 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 CDH9Q9ULB4 789 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 PCDHB12Q9Y5F1 795 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 MICAL3Q7RTP6 2002 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 ERI2A8K979 691 aaKnown RBP10.82□□□□□ -0.68
CUX1-205ENST00000425244 G3V2L1 256 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 M0QZQ0 153 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 TRIM13O60858 407 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 MPOP05164 745 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 CHRNGP07510 517 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 MPSTP25325 297 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 PEX19P40855 299 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 HCAR3P49019 387 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 CXCR3P49682 368 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 TSPY1Q01534 308 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 CDH17Q12864 832 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 LRRC36Q1X8D7 754 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 RAB41Q5JT25 222 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 IZUMO2Q6UXV1 221 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 TAS1R1Q7RTX1 841 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 DEFB107AQ8IZN7 70 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 SPATA6LQ8N4H0 392 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 SLC26A7Q8TE54 656 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 DQX1Q8TE96 717 aaKnown RBP10.82□□□□□ -0.68
CUX1-205ENST00000425244 TSNARE1Q96NA8 513 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 ZNF184Q99676 751 aaPredicted RBP10.82□□□□□ -0.68
CUX1-205ENST00000425244 CDH19Q9H159 772 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 SUDS3Q9H7L9 328 aaPredicted RBP10.82□□□□□ -0.68
CUX1-205ENST00000425244 DLGAP2Q9P1A6 1054 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 NUDT5Q9UKK9 219 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 RAD54BQ9Y620 910 aa10.82□□□□□ -0.68
CUX1-205ENST00000425244 HHLA1C9JL84 531 aa10.81□□□□□ -0.68
CUX1-205ENST00000425244 ZNF195O14628 629 aa10.81□□□□□ -0.68
CUX1-205ENST00000425244 MSI1O43347 362 aaKnown RBP10.81□□□□□ -0.68
CUX1-205ENST00000425244 MOCS2O96007 188 aaPredicted RBP10.81□□□□□ -0.68
CUX1-205ENST00000425244 GALTP07902 379 aa10.81□□□□□ -0.68
CUX1-205ENST00000425244 MAGEA12P43365 314 aa10.81□□□□□ -0.68
CUX1-205ENST00000425244 NPY2RP49146 381 aa10.81□□□□□ -0.68
CUX1-205ENST00000425244 MRPS35P82673 323 aaKnown RBP10.81□□□□□ -0.68
CUX1-205ENST00000425244 ZNF460Q14592 562 aa10.81□□□□□ -0.68
CUX1-205ENST00000425244 TCHHL1Q5QJ38 904 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms