RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 KLHDC7BQ96G42 594 aa18.78■□□□□ 0.6
NUP50-207ENST00000424634 PPP1R16AQ96I34 528 aa18.78■□□□□ 0.6
NUP50-207ENST00000424634 FTSJ1Q9UET6 329 aa18.78■□□□□ 0.6
NUP50-207ENST00000424634 HPCAL4Q9UM19 191 aa18.78■□□□□ 0.6
NUP50-207ENST00000424634 FADS3Q9Y5Q0 445 aa18.78■□□□□ 0.6
NUP50-207ENST00000424634 KNTC1P50748 2209 aa18.78■□□□□ 0.6
NUP50-207ENST00000424634 WASH4PA8MWX3 477 aa18.77■□□□□ 0.6
NUP50-207ENST00000424634 TAF4O00268 1085 aa18.77■□□□□ 0.6
NUP50-207ENST00000424634 DDX3XO00571 662 aaKnown RBP eCLIP18.77■□□□□ 0.6
NUP50-207ENST00000424634 YKT6O15498 198 aa18.77■□□□□ 0.6
NUP50-207ENST00000424634 GSRP00390 522 aa18.77■□□□□ 0.6
NUP50-207ENST00000424634 PRKCIP41743 596 aa18.77■□□□□ 0.6
NUP50-207ENST00000424634 CLDN2P57739 230 aa18.77■□□□□ 0.6
NUP50-207ENST00000424634 MYLK3Q32MK0 819 aa18.77■□□□□ 0.6
NUP50-207ENST00000424634 INAVAQ3KP66 663 aa18.77■□□□□ 0.6
NUP50-207ENST00000424634 ATXN7L2Q5T6C5 722 aaPredicted RBP18.77■□□□□ 0.6
NUP50-207ENST00000424634 SFMBT2Q5VUG0 894 aa18.77■□□□□ 0.6
NUP50-207ENST00000424634 FBXL19Q6PCT2 694 aa18.77■□□□□ 0.6
NUP50-207ENST00000424634 RYBPQ8N488 228 aaPredicted RBP18.77■□□□□ 0.6
NUP50-207ENST00000424634 OR2AP1Q8NGE2 309 aa18.77■□□□□ 0.6
NUP50-207ENST00000424634 ZCCHC14Q8WYQ9 949 aaKnown RBP18.77■□□□□ 0.6
NUP50-207ENST00000424634 HMCESQ96FZ2 354 aa18.77■□□□□ 0.6
NUP50-207ENST00000424634 TRIM7Q9C029 511 aa18.77■□□□□ 0.6
NUP50-207ENST00000424634 PARVAQ9NVD7 372 aa18.77■□□□□ 0.6
NUP50-207ENST00000424634 GPATCH2LQ9NWQ4 482 aa18.77■□□□□ 0.6
NUP50-207ENST00000424634 ANKRD11Q6UB99 2663 aaPredicted RBP18.77■□□□□ 0.6
NUP50-207ENST00000424634 PKD1L2Q7Z442 2459 aa18.76■□□□□ 0.59
NUP50-207ENST00000424634 TMEM191CA6NGB0 347 aa18.76■□□□□ 0.59
NUP50-207ENST00000424634 C16orf96A6NNT2 1141 aa18.76■□□□□ 0.59
NUP50-207ENST00000424634 RASA4BC9J798 803 aa18.76■□□□□ 0.59
NUP50-207ENST00000424634 RASA4O43374 803 aa18.76■□□□□ 0.59
NUP50-207ENST00000424634 BUB1O43683 1085 aa18.76■□□□□ 0.59
NUP50-207ENST00000424634 MAGEC1O60732 1142 aa18.76■□□□□ 0.59
NUP50-207ENST00000424634 FTLP02792 175 aaPredicted RBP18.76■□□□□ 0.59
NUP50-207ENST00000424634 THEGLP0DJG4 465 aa18.76■□□□□ 0.59
NUP50-207ENST00000424634 SKILP12757 684 aa18.76■□□□□ 0.59
NUP50-207ENST00000424634 HNRNPA2B1P22626 353 aaKnown RBP18.76■□□□□ 0.59
NUP50-207ENST00000424634 ABL2P42684 1182 aa18.76■□□□□ 0.59
NUP50-207ENST00000424634 AIF1P55008 147 aa18.76■□□□□ 0.59
NUP50-207ENST00000424634 GEMIN4P57678 1058 aaKnown RBP18.76■□□□□ 0.59
NUP50-207ENST00000424634 SNRPD1P62314 119 aaKnown RBP18.76■□□□□ 0.59
NUP50-207ENST00000424634 DNAJC3Q13217 504 aa18.76■□□□□ 0.59
NUP50-207ENST00000424634 CA9Q16790 459 aa18.76■□□□□ 0.59
NUP50-207ENST00000424634 CCDC157Q569K6 752 aa18.76■□□□□ 0.59
NUP50-207ENST00000424634 GCNT7Q6ZNI0 430 aa18.76■□□□□ 0.59
NUP50-207ENST00000424634 UMODL1-AS1Q8N2C9 162 aa18.76■□□□□ 0.59
NUP50-207ENST00000424634 OXR1Q8N573 874 aa18.76■□□□□ 0.59
NUP50-207ENST00000424634 OR13H1Q8NG92 308 aa18.76■□□□□ 0.59
NUP50-207ENST00000424634 CNDP2Q96KP4 475 aaKnown RBP18.76■□□□□ 0.59
NUP50-207ENST00000424634 BMFQ96LC9 184 aa18.76■□□□□ 0.59
NUP50-207ENST00000424634 EPAS1Q99814 870 aa18.76■□□□□ 0.59
NUP50-207ENST00000424634 SLC17A9Q9BYT1 436 aa18.76■□□□□ 0.59
NUP50-207ENST00000424634 CBX8Q9HC52 389 aa18.76■□□□□ 0.59
NUP50-207ENST00000424634 CELSR3Q9NYQ7 3312 aa18.75■□□□□ 0.59
NUP50-207ENST00000424634 SYCE3A1L190 88 aa18.75■□□□□ 0.59
NUP50-207ENST00000424634 SRRM3A6NNA2 597 aaPredicted RBP18.75■□□□□ 0.59
NUP50-207ENST00000424634 KRIT1O00522 736 aa18.75■□□□□ 0.59
NUP50-207ENST00000424634 ENC1O14682 589 aa18.75■□□□□ 0.59
NUP50-207ENST00000424634 RAD51BO15315 384 aa18.75■□□□□ 0.59
NUP50-207ENST00000424634 SPINT1O43278 529 aa18.75■□□□□ 0.59
NUP50-207ENST00000424634 AP1G1O43747 822 aa18.75■□□□□ 0.59
NUP50-207ENST00000424634 SDC3O75056 442 aa18.75■□□□□ 0.59
NUP50-207ENST00000424634 TMCC1O94876 653 aa18.75■□□□□ 0.59
NUP50-207ENST00000424634 POP4O95707 220 aaKnown RBP18.75■□□□□ 0.59
NUP50-207ENST00000424634 LDOC1O95751 146 aaPredicted RBP18.75■□□□□ 0.59
NUP50-207ENST00000424634 PAK4O96013 591 aaPredicted RBP18.75■□□□□ 0.59
NUP50-207ENST00000424634 GZMAP12544 262 aa18.75■□□□□ 0.59
NUP50-207ENST00000424634 PSMA2P25787 234 aa18.75■□□□□ 0.59
NUP50-207ENST00000424634 AKT2P31751 481 aa18.75■□□□□ 0.59
NUP50-207ENST00000424634 YBEYP58557 167 aaPredicted RBP18.75■□□□□ 0.59
NUP50-207ENST00000424634 RPS21P63220 83 aaKnown RBP18.75■□□□□ 0.59
NUP50-207ENST00000424634 MAPK8IP2Q13387 824 aaPredicted RBP18.75■□□□□ 0.59
NUP50-207ENST00000424634 SERINC3Q13530 473 aa18.75■□□□□ 0.59
NUP50-207ENST00000424634 ZNF805Q5CZA5 627 aa18.75■□□□□ 0.59
NUP50-207ENST00000424634 PPP1R2P3Q6NXS1 205 aa18.75■□□□□ 0.59
NUP50-207ENST00000424634 DHRS13Q6UX07 377 aa18.75■□□□□ 0.59
NUP50-207ENST00000424634 ABI3BPQ7Z7G0 1075 aa18.75■□□□□ 0.59
NUP50-207ENST00000424634 ZNF354CQ86Y25 554 aa18.75■□□□□ 0.59
NUP50-207ENST00000424634 SLC25A45Q8N413 288 aa18.75■□□□□ 0.59
NUP50-207ENST00000424634 LRIG1Q96JA1 1093 aa18.75■□□□□ 0.59
NUP50-207ENST00000424634 FEM1CQ96JP0 617 aa18.75■□□□□ 0.59
NUP50-207ENST00000424634 KLHL32Q96NJ5 620 aa18.75■□□□□ 0.59
NUP50-207ENST00000424634 PEBP4Q96S96 227 aa18.75■□□□□ 0.59
NUP50-207ENST00000424634 EDEM3Q9BZQ6 932 aa18.75■□□□□ 0.59
NUP50-207ENST00000424634 CATSPERBQ9H7T0 1116 aa18.75■□□□□ 0.59
NUP50-207ENST00000424634 GGT7Q9UJ14 662 aa18.75■□□□□ 0.59
NUP50-207ENST00000424634 FAM149AA5PLN7 773 aa18.74■□□□□ 0.59
NUP50-207ENST00000424634 POM121BA6NF01 834 aa18.74■□□□□ 0.59
NUP50-207ENST00000424634 ZSCAN5CA6NGD5 496 aaPredicted RBP18.74■□□□□ 0.59
NUP50-207ENST00000424634 SERPINC1P01008 464 aa18.74■□□□□ 0.59
NUP50-207ENST00000424634 UGT2B4P06133 528 aa18.74■□□□□ 0.59
NUP50-207ENST00000424634 KLHL30Q0D2K2 578 aa18.74■□□□□ 0.59
NUP50-207ENST00000424634 CYTH1Q15438 398 aa18.74■□□□□ 0.59
NUP50-207ENST00000424634 SMAD1Q15797 465 aaKnown RBP18.74■□□□□ 0.59
NUP50-207ENST00000424634 INO80DQ53TQ3 878 aaPredicted RBP18.74■□□□□ 0.59
NUP50-207ENST00000424634 KIAA1161Q6NSJ0 714 aa18.74■□□□□ 0.59
NUP50-207ENST00000424634 CYP4V2Q6ZWL3 525 aaPredicted RBP18.74■□□□□ 0.59
NUP50-207ENST00000424634 LUZP1Q86V48 1076 aa18.74■□□□□ 0.59
NUP50-207ENST00000424634 SLC22A18ASQ8N1D0 253 aa18.74■□□□□ 0.59
NUP50-207ENST00000424634 TSC1Q92574 1164 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms