RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 PPARGP37231 505 aaPredicted RBP14.54□□□□□ -0.08
MSH5-206ENST00000423982 RPL14P50914 215 aaKnown RBP14.54□□□□□ -0.08
MSH5-206ENST00000423982 ATN1P54259 1190 aaPredicted RBP14.54□□□□□ -0.08
MSH5-206ENST00000423982 SH3BGRP55822 239 aaPredicted RBP14.54□□□□□ -0.08
MSH5-206ENST00000423982 PPIDQ08752 370 aaKnown RBP14.54□□□□□ -0.08
MSH5-206ENST00000423982 METTL21CQ5VZV1 264 aa14.54□□□□□ -0.08
MSH5-206ENST00000423982 KLC3Q6P597 504 aa14.54□□□□□ -0.08
MSH5-206ENST00000423982 CLEC14AQ86T13 490 aa14.54□□□□□ -0.08
MSH5-206ENST00000423982 TMEM151AQ8N4L1 468 aa14.54□□□□□ -0.08
MSH5-206ENST00000423982 PCSK9Q8NBP7 692 aaKnown RBP14.54□□□□□ -0.08
MSH5-206ENST00000423982 RP9Q8TA86 221 aaKnown RBP14.54□□□□□ -0.08
MSH5-206ENST00000423982 FAM210AQ96ND0 272 aa14.54□□□□□ -0.08
MSH5-206ENST00000423982 SLC29A1Q99808 456 aa14.54□□□□□ -0.08
MSH5-206ENST00000423982 CCT7Q99832 543 aa14.54□□□□□ -0.08
MSH5-206ENST00000423982 OMDQ99983 421 aa14.54□□□□□ -0.08
MSH5-206ENST00000423982 ACE2Q9BYF1 805 aaPredicted RBP14.54□□□□□ -0.08
MSH5-206ENST00000423982 CHRAC1Q9NRG0 131 aa14.54□□□□□ -0.08
MSH5-206ENST00000423982 UBP1Q9NZI7 540 aa14.54□□□□□ -0.08
MSH5-206ENST00000423982 NUP205Q92621 2012 aa14.54□□□□□ -0.08
MSH5-206ENST00000423982 ZCWPW2A0A1B0GU75 182 aa14.53□□□□□ -0.08
MSH5-206ENST00000423982 SMIM35A0A1B0GVV1 85 aa14.53□□□□□ -0.08
MSH5-206ENST00000423982 TCAF2A6NFQ2 919 aa14.53□□□□□ -0.08
MSH5-206ENST00000423982 KCNU1A8MYU2 1149 aa14.53□□□□□ -0.08
MSH5-206ENST00000423982 TMX2-CTNND1H3BSU7 103 aa14.53□□□□□ -0.08
MSH5-206ENST00000423982 TSPAN1O60635 241 aa14.53□□□□□ -0.08
MSH5-206ENST00000423982 PDGFRBP09619 1106 aa14.53□□□□□ -0.08
MSH5-206ENST00000423982 PSMC3P17980 439 aa14.53□□□□□ -0.08
MSH5-206ENST00000423982 SPRP35270 261 aaPredicted RBP14.53□□□□□ -0.08
MSH5-206ENST00000423982 NR1H2P55055 460 aa14.53□□□□□ -0.08
MSH5-206ENST00000423982 CYP2R1Q6VVX0 501 aa14.53□□□□□ -0.08
MSH5-206ENST00000423982 TRIM67Q6ZTA4 783 aa14.53□□□□□ -0.08
MSH5-206ENST00000423982 PGAM4Q8N0Y7 254 aa14.53□□□□□ -0.08
MSH5-206ENST00000423982 DNAAF3Q8N9W5 541 aa14.53□□□□□ -0.08
MSH5-206ENST00000423982 TSPAN14Q8NG11 270 aa14.53□□□□□ -0.08
MSH5-206ENST00000423982 C11orf84Q9BUA3 381 aaPredicted RBP14.53□□□□□ -0.08
MSH5-206ENST00000423982 PDZD7Q9H5P4 517 aa14.53□□□□□ -0.08
MSH5-206ENST00000423982 IARS2Q9NSE4 1012 aaKnown RBP14.53□□□□□ -0.08
MSH5-206ENST00000423982 PIN4Q9Y237 131 aaKnown RBP14.53□□□□□ -0.08
MSH5-206ENST00000423982 COPG1Q9Y678 874 aaKnown RBP14.53□□□□□ -0.08
MSH5-206ENST00000423982 A0A1W2PQ45 241 aaPredicted RBP14.53□□□□□ -0.08
MSH5-206ENST00000423982 A0A1W2PQY0 241 aa14.53□□□□□ -0.08
MSH5-206ENST00000423982 BCAS2O75934 225 aaPredicted RBP14.53□□□□□ -0.08
MSH5-206ENST00000423982 NDST2P52849 883 aa14.53□□□□□ -0.08
MSH5-206ENST00000423982 KLHL35Q6PF15 583 aa14.53□□□□□ -0.08
MSH5-206ENST00000423982 CHERPQ8IWX8 916 aaKnown RBP14.53□□□□□ -0.08
MSH5-206ENST00000423982 LSMEM2Q8N112 164 aa14.53□□□□□ -0.08
MSH5-206ENST00000423982 TRIML2Q8N7C3 387 aa14.53□□□□□ -0.08
MSH5-206ENST00000423982 CNDP1Q96KN2 507 aa14.53□□□□□ -0.08
MSH5-206ENST00000423982 ZNF385DQ9H6B1 395 aa14.53□□□□□ -0.08
MSH5-206ENST00000423982 PRDM16Q9HAZ2 1276 aa14.53□□□□□ -0.08
MSH5-206ENST00000423982 STARD7Q9NQZ5 370 aa14.53□□□□□ -0.08
MSH5-206ENST00000423982 PRMT7Q9NVM4 692 aaPredicted RBP14.53□□□□□ -0.08
MSH5-206ENST00000423982 SCN10AQ9Y5Y9 1956 aa14.53□□□□□ -0.08
MSH5-206ENST00000423982 KPNA7A9QM74 516 aa14.52□□□□□ -0.08
MSH5-206ENST00000423982 KPNA6O60684 536 aa14.52□□□□□ -0.08
MSH5-206ENST00000423982 CCL5P13501 91 aa14.52□□□□□ -0.08
MSH5-206ENST00000423982 ATICP31939 592 aa14.52□□□□□ -0.08
MSH5-206ENST00000423982 IFRD2Q12894 506 aaPredicted RBP14.52□□□□□ -0.08
MSH5-206ENST00000423982 DCTN2Q13561 401 aaKnown RBP14.52□□□□□ -0.08
MSH5-206ENST00000423982 GRM3Q14832 879 aa14.52□□□□□ -0.08
MSH5-206ENST00000423982 SNX17Q15036 470 aa14.52□□□□□ -0.08
MSH5-206ENST00000423982 ZFP1Q6P2D0 407 aa14.52□□□□□ -0.08
MSH5-206ENST00000423982 RPS27LQ71UM5 84 aaKnown RBP14.52□□□□□ -0.08
MSH5-206ENST00000423982 KLHL23Q8NBE8 558 aa14.52□□□□□ -0.08
MSH5-206ENST00000423982 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.52□□□□□ -0.08
MSH5-206ENST00000423982 KCTD4Q8WVF5 259 aa14.52□□□□□ -0.08
MSH5-206ENST00000423982 SGF29Q96ES7 293 aa14.52□□□□□ -0.08
MSH5-206ENST00000423982 SCYL1Q96KG9 808 aa14.52□□□□□ -0.08
MSH5-206ENST00000423982 PLK2Q9NYY3 685 aa14.52□□□□□ -0.08
MSH5-206ENST00000423982 RAP2CQ9Y3L5 183 aa14.52□□□□□ -0.08
MSH5-206ENST00000423982 ARHGAP10A1A4S6 786 aa14.52□□□□□ -0.09
MSH5-206ENST00000423982 TMEM114B3SHH9 223 aa14.52□□□□□ -0.09
MSH5-206ENST00000423982 ZFXP17010 805 aaPredicted RBP14.52□□□□□ -0.09
MSH5-206ENST00000423982 ARL4AP40617 200 aa14.52□□□□□ -0.09
MSH5-206ENST00000423982 NSUN2Q08J23 767 aaKnown RBP eCLIP14.52□□□□□ -0.09
MSH5-206ENST00000423982 USP41Q3LFD5 358 aa14.52□□□□□ -0.09
MSH5-206ENST00000423982 MTX3Q5HYI7 312 aa14.52□□□□□ -0.09
MSH5-206ENST00000423982 SH2D4BQ5SQS7 431 aa14.52□□□□□ -0.09
MSH5-206ENST00000423982 CCNYL1Q8N7R7 359 aa14.52□□□□□ -0.09
MSH5-206ENST00000423982 KIF12Q96FN5 646 aa14.52□□□□□ -0.09
MSH5-206ENST00000423982 VPS39Q96JC1 886 aa14.52□□□□□ -0.09
MSH5-206ENST00000423982 CIB1Q99828 191 aa14.52□□□□□ -0.09
MSH5-206ENST00000423982 EIF2AQ9BY44 585 aaKnown RBP14.52□□□□□ -0.09
MSH5-206ENST00000423982 VRTNQ9H8Y1 702 aa14.52□□□□□ -0.09
MSH5-206ENST00000423982 ZBTB26Q9HCK0 441 aa14.52□□□□□ -0.09
MSH5-206ENST00000423982 KLHL8Q9P2G9 620 aaPredicted RBP14.52□□□□□ -0.09
MSH5-206ENST00000423982 VANGL2Q9ULK5 521 aa14.52□□□□□ -0.09
MSH5-206ENST00000423982 ARHGEF37A1IGU5 675 aa14.51□□□□□ -0.09
MSH5-206ENST00000423982 PTK2BQ14289 1009 aa14.51□□□□□ -0.09
MSH5-206ENST00000423982 GLRA4Q5JXX5 417 aa14.51□□□□□ -0.09
MSH5-206ENST00000423982 SPANXN3Q5MJ09 141 aa14.51□□□□□ -0.09
MSH5-206ENST00000423982 LAYNQ6UX15 382 aa14.51□□□□□ -0.09
MSH5-206ENST00000423982 OR6B3Q8NGW1 331 aa14.51□□□□□ -0.09
MSH5-206ENST00000423982 CENPIQ92674 756 aaPredicted RBP14.51□□□□□ -0.09
MSH5-206ENST00000423982 DRC3Q9H069 523 aa14.51□□□□□ -0.09
MSH5-206ENST00000423982 SNX13Q9Y5W8 968 aa14.51□□□□□ -0.09
MSH5-206ENST00000423982 E7ENX8 843 aa14.51□□□□□ -0.09
MSH5-206ENST00000423982 DARSP14868 501 aaKnown RBP14.51□□□□□ -0.09
MSH5-206ENST00000423982 CKMT2P17540 419 aa14.51□□□□□ -0.09
MSH5-206ENST00000423982 RABGGTBP53611 331 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms