RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 CAP1Q01518 475 aa9.86□□□□□ -0.83
CMSS1-201ENST00000421999 PTP4A2Q12974 167 aa9.86□□□□□ -0.83
CMSS1-201ENST00000421999 GALNT3Q14435 633 aa9.86□□□□□ -0.83
CMSS1-201ENST00000421999 TTC27Q6P3X3 843 aa9.86□□□□□ -0.83
CMSS1-201ENST00000421999 LRIG3Q6UXM1 1119 aa9.86□□□□□ -0.83
CMSS1-201ENST00000421999 SPATA24Q86W54 205 aa9.86□□□□□ -0.83
CMSS1-201ENST00000421999 SLC22A17Q8WUG5 538 aa9.86□□□□□ -0.83
CMSS1-201ENST00000421999 TMEM174Q8WUU8 243 aa9.86□□□□□ -0.83
CMSS1-201ENST00000421999 MED8Q96G25 268 aa9.86□□□□□ -0.83
CMSS1-201ENST00000421999 SGSM3Q96HU1 749 aa9.86□□□□□ -0.83
CMSS1-201ENST00000421999 TRMT61BQ9BVS5 477 aaKnown RBP9.86□□□□□ -0.83
CMSS1-201ENST00000421999 WWP1Q9H0M0 922 aa9.86□□□□□ -0.83
CMSS1-201ENST00000421999 TNKS2Q9H2K2 1166 aa9.86□□□□□ -0.83
CMSS1-201ENST00000421999 ZFP69BQ9UJL9 534 aa9.86□□□□□ -0.83
CMSS1-201ENST00000421999 FBXW11Q9UKB1 542 aa9.86□□□□□ -0.83
CMSS1-201ENST00000421999 DYRK1BQ9Y463 629 aa9.86□□□□□ -0.83
CMSS1-201ENST00000421999 ZFP37Q9Y6Q3 630 aaPredicted RBP9.86□□□□□ -0.83
CMSS1-201ENST00000421999 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.86□□□□□ -0.83
CMSS1-201ENST00000421999 GMNCA6NCL1 334 aa9.86□□□□□ -0.83
CMSS1-201ENST00000421999 FAM189A1O60320 539 aa9.86□□□□□ -0.83
CMSS1-201ENST00000421999 RHOQP17081 205 aa9.86□□□□□ -0.83
CMSS1-201ENST00000421999 GP5P40197 560 aa9.86□□□□□ -0.83
CMSS1-201ENST00000421999 SERPINB8P50452 374 aa9.86□□□□□ -0.83
CMSS1-201ENST00000421999 YBEYP58557 167 aaPredicted RBP9.86□□□□□ -0.83
CMSS1-201ENST00000421999 GNA12Q03113 381 aa9.86□□□□□ -0.83
CMSS1-201ENST00000421999 NOMO1Q15155 1222 aa9.86□□□□□ -0.83
CMSS1-201ENST00000421999 TRIP4Q15650 581 aaPredicted RBP9.86□□□□□ -0.83
CMSS1-201ENST00000421999 LRRTM3Q86VH5 581 aa9.86□□□□□ -0.83
CMSS1-201ENST00000421999 PRDM16Q9HAZ2 1276 aa9.86□□□□□ -0.83
CMSS1-201ENST00000421999 TXLNGQ9NUQ3 528 aa9.86□□□□□ -0.83
CMSS1-201ENST00000421999 ZNHIT2Q9UHR6 403 aa9.86□□□□□ -0.83
CMSS1-201ENST00000421999 INSL5Q9Y5Q6 135 aa9.86□□□□□ -0.83
CMSS1-201ENST00000421999 SIPA1L1O43166 1804 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 INPP4BO15327 924 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 IRAK2O43187 625 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 CHN1P15882 459 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 PSMD8P48556 350 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 PITX1P78337 314 aaPredicted RBP9.85□□□□□ -0.83
CMSS1-201ENST00000421999 GRSF1Q12849 480 aaKnown RBP eCLIP9.85□□□□□ -0.83
CMSS1-201ENST00000421999 DCAF12L1Q5VU92 463 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 DUPD1Q68J44 220 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 GPRIN1Q7Z2K8 1008 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 HERVK_113Q902F9 699 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 TIFAQ96CG3 184 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 SPDL1Q96EA4 605 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 PHF21BQ96EK2 531 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 SERAC1Q96JX3 654 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 NKX2-4Q9H2Z4 354 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 TMLHEQ9NVH6 421 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 PCDH10Q9P2E7 1040 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 EFR3BQ9Y2G0 817 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 GYG2O15488 501 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 AMD1P17707 334 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 TFE3P19532 575 aaPredicted RBP9.85□□□□□ -0.83
CMSS1-201ENST00000421999 PTPN3P26045 913 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 LRRC74AQ0VAA2 488 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 CHI3L2Q15782 390 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 RIBC1Q8N443 379 aaPredicted RBP9.85□□□□□ -0.83
CMSS1-201ENST00000421999 LZICQ8WZA0 190 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 E2F7Q96AV8 911 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 PRMT1Q99873 361 aaKnown RBP9.85□□□□□ -0.83
CMSS1-201ENST00000421999 TUBB6Q9BUF5 446 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 WDR41Q9HAD4 459 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 PSD3Q9NYI0 1048 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 CTNNAL1Q9UBT7 734 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 GPSM3Q9Y4H4 160 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 GLRA3O75311 464 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 BANF1O75531 89 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 PIAS1O75925 651 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 BAIAP3O94812 1187 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 L1CAMP32004 1257 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 IFNEQ86WN2 208 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 NIPA2Q8N8Q9 360 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 LEMD2Q8NC56 503 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 MCOLN3Q8TDD5 553 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 CAVIN3Q969G5 261 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 C8orf48Q96LL4 319 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 OSBPL7Q9BZF2 842 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 IL22Q9GZX6 179 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 ABCB8Q9NUT2 735 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 TDP1Q9NUW8 608 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 NDOR1Q9UHB4 597 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 FZD10Q9ULW2 581 aa9.85□□□□□ -0.83
CMSS1-201ENST00000421999 ANGPT2O15123 496 aa9.84□□□□□ -0.83
CMSS1-201ENST00000421999 SLC25A14O95258 325 aaPredicted RBP9.84□□□□□ -0.83
CMSS1-201ENST00000421999 HAPLN1P10915 354 aaPredicted RBP9.84□□□□□ -0.83
CMSS1-201ENST00000421999 RFX3P48380 749 aa9.84□□□□□ -0.83
CMSS1-201ENST00000421999 PDPK2PQ6A1A2 396 aa9.84□□□□□ -0.83
CMSS1-201ENST00000421999 CHRDL2Q6WN34 429 aa9.84□□□□□ -0.83
CMSS1-201ENST00000421999 RTN4RL1Q86UN2 441 aaPredicted RBP9.84□□□□□ -0.83
CMSS1-201ENST00000421999 KIRREL3Q8IZU9 778 aa9.84□□□□□ -0.83
CMSS1-201ENST00000421999 TSEN2Q8NCE0 465 aaKnown RBP9.84□□□□□ -0.83
CMSS1-201ENST00000421999 CMASQ8NFW8 434 aaPredicted RBP9.84□□□□□ -0.83
CMSS1-201ENST00000421999 CYP2S1Q96SQ9 504 aa9.84□□□□□ -0.83
CMSS1-201ENST00000421999 NPHS2Q9NP85 383 aa9.84□□□□□ -0.83
CMSS1-201ENST00000421999 AKAP7Q9P0M2 348 aaPredicted RBP9.84□□□□□ -0.83
CMSS1-201ENST00000421999 WNT6Q9Y6F9 365 aa9.84□□□□□ -0.83
CMSS1-201ENST00000421999 MYH10P35580 1976 aa9.84□□□□□ -0.83
CMSS1-201ENST00000421999 SYCE1LA8MT33 242 aa9.84□□□□□ -0.83
CMSS1-201ENST00000421999 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms