RNA–Protein interactions for RNA: ENST00000421182.5

FN1-207, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,103 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-207ENST00000421182 C1orf186Q6ZWK4 172 aa11.23□□□□□ -0.61
FN1-207ENST00000421182 SYT12Q8IV01 421 aa11.23□□□□□ -0.61
FN1-207ENST00000421182 MTMR14Q8NCE2 650 aa11.23□□□□□ -0.61
FN1-207ENST00000421182 SPPL2AQ8TCT8 520 aa11.23□□□□□ -0.61
FN1-207ENST00000421182 ACMSDQ8TDX5 336 aa11.23□□□□□ -0.61
FN1-207ENST00000421182 TATDN2Q93075 761 aa11.23□□□□□ -0.61
FN1-207ENST00000421182 APOPT1Q96IL0 206 aa11.23□□□□□ -0.61
FN1-207ENST00000421182 TRIM8Q9BZR9 551 aa11.23□□□□□ -0.61
FN1-207ENST00000421182 SERHL2Q9H4I8 314 aa11.23□□□□□ -0.61
FN1-207ENST00000421182 SERHLQ9NQF3 203 aa11.23□□□□□ -0.61
FN1-207ENST00000421182 ZNF214Q9UL59 606 aaPredicted RBP11.23□□□□□ -0.61
FN1-207ENST00000421182 SESN1Q9Y6P5 492 aa11.23□□□□□ -0.61
FN1-207ENST00000421182 MAP3K6O95382 1288 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 ITGAVP06756 1048 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 TSHRP16473 764 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 KCNA3P22001 575 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 MGAT1P26572 445 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 FEN1P39748 380 aaKnown RBP11.22□□□□□ -0.61
FN1-207ENST00000421182 LGALS3BPQ08380 585 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 ZNF571Q7Z3V5 609 aaPredicted RBP11.22□□□□□ -0.61
FN1-207ENST00000421182 EPHX4Q8IUS5 362 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 SLC22A17Q8WUG5 538 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 ROBO3Q96MS0 1386 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 BCL9LQ86UU0 1499 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 GTPBP1O00178 669 aaKnown RBP11.22□□□□□ -0.61
FN1-207ENST00000421182 MGRN1O60291 552 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 CD52P31358 61 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 TRAPPC12Q8WVT3 735 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 TPD52L3Q96J77 140 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 C11orf84Q9BUA3 381 aaPredicted RBP11.22□□□□□ -0.61
FN1-207ENST00000421182 USP20Q9Y2K6 914 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 BCLAF3A2AJT9 711 aaKnown RBP11.22□□□□□ -0.61
FN1-207ENST00000421182 SLC28A1O00337 649 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 PRNPP04156 253 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 WARSP23381 471 aaKnown RBP11.22□□□□□ -0.61
FN1-207ENST00000421182 PIK3R1P27986 724 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 CBX2Q14781 532 aaPredicted RBP11.22□□□□□ -0.61
FN1-207ENST00000421182 PAPD7Q5XG87 772 aaKnown RBP11.22□□□□□ -0.61
FN1-207ENST00000421182 IL27RAQ6UWB1 636 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 POLNQ7Z5Q5 900 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 KIAA0319LQ8IZA0 1049 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 GJD3Q8N144 294 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 DNAJC9Q8WXX5 260 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 MYLPFQ96A32 169 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 KLHL4Q9C0H6 718 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 CYLDQ9NQC7 956 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 OR10H1Q9Y4A9 318 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 UBIAD1Q9Y5Z9 338 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 WDR27A2RRH5 827 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 DNALI1O14645 258 aaPredicted RBP11.22□□□□□ -0.61
FN1-207ENST00000421182 ATG13O75143 517 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 VAPBO95292 243 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 ADRA1DP25100 572 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 C9orf57Q5W0N0 161 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 SELENOMQ8WWX9 145 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 ATG4AQ8WYN0 398 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 FAXDC2Q96IV6 333 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 PPP3R2Q96LZ3 170 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 NECTIN3Q9NQS3 549 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 PNMA8CA0A1B0GUJ8 204 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 AMPD1P23109 780 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 DDX6P26196 483 aaKnown RBP eCLIP11.22□□□□□ -0.611e-11■■■■□ 22.1
FN1-207ENST00000421182 POU1F1P28069 291 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 FMO4P31512 558 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 EPS8Q12929 822 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 PWP1Q13610 501 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 AP5B1Q2VPB7 878 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 TIMM50Q3ZCQ8 353 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 CHSY3Q70JA7 882 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 GATAD2AQ86YP4 633 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 ADAM32Q8TC27 787 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 ZNF607Q96SK3 696 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 INVSQ9Y283 1065 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 SLC45A1Q9Y2W3 748 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 C1orf232A0A0U1RR37 186 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 SEPT4O43236 478 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 PPIBP23284 216 aaKnown RBP11.22□□□□□ -0.61
FN1-207ENST00000421182 KDELR1P24390 212 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 USP4Q13107 963 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 FAM180AQ6UWF9 173 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 TSHZ1Q6ZSZ6 1077 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 PTCD2Q8WV60 388 aaKnown RBP11.22□□□□□ -0.61
FN1-207ENST00000421182 PRRG4Q9BZD6 226 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 DDX4Q9NQI0 724 aaKnown RBP11.22□□□□□ -0.61
FN1-207ENST00000421182 ANGPT4Q9Y264 503 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 TBC1D3DA0A087WVF3 549 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 TBC1D3IA0A087WXS9 549 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 TBC1D3EA0A087X179 549 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 TBC1D3KA0A087X1G2 549 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 A0A096LPK6 155 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 RBM47A0AV96 593 aaKnown RBP11.22□□□□□ -0.61
FN1-207ENST00000421182 TBC1D3FA6NER0 549 aaPredicted RBP11.22□□□□□ -0.61
FN1-207ENST00000421182 TBC1D3LB9A6J9 549 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 H3BN98 237 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 FGRP09769 529 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 TBC1D3HP0C7X1 549 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 POLD2P49005 469 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 PSMC6P62333 389 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 TBC1D3GQ6DHY5 549 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 TBC1D3CQ6IPX1 549 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms