RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 LRP4O75096 1905 aa11.23□□□□□ -0.61
SSBP3-206ENST00000420121 A0A1W2PQC6 194 aa11.23□□□□□ -0.61
SSBP3-206ENST00000420121 SRRM3A6NNA2 597 aaPredicted RBP11.23□□□□□ -0.61
SSBP3-206ENST00000420121 DDX3XO00571 662 aaKnown RBP eCLIP11.23□□□□□ -0.61
SSBP3-206ENST00000420121 SLC31A1O15431 190 aa11.23□□□□□ -0.61
SSBP3-206ENST00000420121 YKT6O15498 198 aa11.23□□□□□ -0.61
SSBP3-206ENST00000420121 KDELR3O43731 214 aa11.23□□□□□ -0.61
SSBP3-206ENST00000420121 AP1G1O43747 822 aa11.23□□□□□ -0.61
SSBP3-206ENST00000420121 RAMP2O60895 175 aa11.23□□□□□ -0.61
SSBP3-206ENST00000420121 GSRP00390 522 aa11.23□□□□□ -0.61
SSBP3-206ENST00000420121 ETFBP38117 255 aa11.23□□□□□ -0.61
SSBP3-206ENST00000420121 PRKCIP41743 596 aa11.23□□□□□ -0.61
SSBP3-206ENST00000420121 ABL2P42684 1182 aa11.23□□□□□ -0.61
SSBP3-206ENST00000420121 RECQLP46063 649 aaPredicted RBP11.23□□□□□ -0.61
SSBP3-206ENST00000420121 ZNF165P49910 485 aa11.23□□□□□ -0.61
SSBP3-206ENST00000420121 NEK3P51956 506 aa11.23□□□□□ -0.61
SSBP3-206ENST00000420121 MAMLD1Q13495 774 aa11.23□□□□□ -0.61
SSBP3-206ENST00000420121 CAMK2BQ13554 666 aa11.23□□□□□ -0.61
SSBP3-206ENST00000420121 POLD3Q15054 466 aaPredicted RBP11.23□□□□□ -0.61
SSBP3-206ENST00000420121 SLC45A4Q5BKX6 768 aa11.23□□□□□ -0.61
SSBP3-206ENST00000420121 ZNF571Q7Z3V5 609 aaPredicted RBP11.23□□□□□ -0.61
SSBP3-206ENST00000420121 ABI3BPQ7Z7G0 1075 aa11.23□□□□□ -0.61
SSBP3-206ENST00000420121 SLC22A18ASQ8N1D0 253 aa11.23□□□□□ -0.61
SSBP3-206ENST00000420121 NETO2Q8NC67 525 aa11.23□□□□□ -0.61
SSBP3-206ENST00000420121 OR2AP1Q8NGE2 309 aa11.23□□□□□ -0.61
SSBP3-206ENST00000420121 OR6K2Q8NGY2 324 aa11.23□□□□□ -0.61
SSBP3-206ENST00000420121 TSC1Q92574 1164 aa11.23□□□□□ -0.61
SSBP3-206ENST00000420121 VCPIP1Q96JH7 1222 aa11.23□□□□□ -0.61
SSBP3-206ENST00000420121 PEBP4Q96S96 227 aa11.23□□□□□ -0.61
SSBP3-206ENST00000420121 TRIM7Q9C029 511 aa11.23□□□□□ -0.61
SSBP3-206ENST00000420121 NAT10Q9H0A0 1025 aaKnown RBP11.23□□□□□ -0.61
SSBP3-206ENST00000420121 ZDHHC6Q9H6R6 413 aa11.23□□□□□ -0.61
SSBP3-206ENST00000420121 AIPL1Q9NZN9 384 aa11.23□□□□□ -0.61
SSBP3-206ENST00000420121 HECAQ9UBI9 543 aaPredicted RBP11.23□□□□□ -0.61
SSBP3-206ENST00000420121 FTSJ1Q9UET6 329 aa11.23□□□□□ -0.61
SSBP3-206ENST00000420121 GGT7Q9UJ14 662 aa11.23□□□□□ -0.61
SSBP3-206ENST00000420121 METRNQ9UJH8 293 aa11.23□□□□□ -0.61
SSBP3-206ENST00000420121 ADAMTS20P59510 1910 aa11.23□□□□□ -0.61
SSBP3-206ENST00000420121 GOLGA8CPA6NN73 597 aa11.22□□□□□ -0.61
SSBP3-206ENST00000420121 SMTNL1A8MU46 457 aa11.22□□□□□ -0.61
SSBP3-206ENST00000420121 TMCO5BA8MYB1 307 aa11.22□□□□□ -0.61
SSBP3-206ENST00000420121 ENC1O14682 589 aa11.22□□□□□ -0.61
SSBP3-206ENST00000420121 RAD51BO15315 384 aa11.22□□□□□ -0.61
SSBP3-206ENST00000420121 ITGAVP06756 1048 aa11.22□□□□□ -0.61
SSBP3-206ENST00000420121 THEGLP0DJG4 465 aa11.22□□□□□ -0.61
SSBP3-206ENST00000420121 GIMD1P0DJR0 217 aa11.22□□□□□ -0.61
SSBP3-206ENST00000420121 TNFAIP3P21580 790 aa11.22□□□□□ -0.61
SSBP3-206ENST00000420121 HNRNPA2B1P22626 353 aaKnown RBP11.22□□□□□ -0.61
SSBP3-206ENST00000420121 EPHB2P29323 1055 aa11.22□□□□□ -0.61
SSBP3-206ENST00000420121 ARRB1P49407 418 aaPredicted RBP11.22□□□□□ -0.61
SSBP3-206ENST00000420121 ACADVLP49748 655 aa11.22□□□□□ -0.61
SSBP3-206ENST00000420121 DNA2P51530 1060 aa11.22□□□□□ -0.61
SSBP3-206ENST00000420121 AIF1P55008 147 aa11.22□□□□□ -0.61
SSBP3-206ENST00000420121 CLDN2P57739 230 aa11.22□□□□□ -0.61
SSBP3-206ENST00000420121 DNAJC3Q13217 504 aa11.22□□□□□ -0.61
SSBP3-206ENST00000420121 STAT4Q14765 748 aa11.22□□□□□ -0.61
SSBP3-206ENST00000420121 NR1I3Q14994 352 aa11.22□□□□□ -0.61
SSBP3-206ENST00000420121 SMAD1Q15797 465 aaKnown RBP11.22□□□□□ -0.61
SSBP3-206ENST00000420121 CA9Q16790 459 aa11.22□□□□□ -0.61
SSBP3-206ENST00000420121 EFHC2Q5JST6 749 aa11.22□□□□□ -0.61
SSBP3-206ENST00000420121 ATXN7L2Q5T6C5 722 aaPredicted RBP11.22□□□□□ -0.61
SSBP3-206ENST00000420121 SCYL2Q6P3W7 929 aa11.22□□□□□ -0.61
SSBP3-206ENST00000420121 TMC6Q7Z403 805 aa11.22□□□□□ -0.61
SSBP3-206ENST00000420121 PROSER1Q86XN7 944 aa11.22□□□□□ -0.61
SSBP3-206ENST00000420121 UMODL1-AS1Q8N2C9 162 aa11.22□□□□□ -0.61
SSBP3-206ENST00000420121 SLC25A45Q8N413 288 aa11.22□□□□□ -0.61
SSBP3-206ENST00000420121 OXR1Q8N573 874 aa11.22□□□□□ -0.61
SSBP3-206ENST00000420121 EID2Q8N6I1 236 aa11.22□□□□□ -0.61
SSBP3-206ENST00000420121 OR13H1Q8NG92 308 aa11.22□□□□□ -0.61
SSBP3-206ENST00000420121 HMCESQ96FZ2 354 aa11.22□□□□□ -0.61
SSBP3-206ENST00000420121 KLHDC7BQ96G42 594 aa11.22□□□□□ -0.61
SSBP3-206ENST00000420121 PPP1R16AQ96I34 528 aa11.22□□□□□ -0.61
SSBP3-206ENST00000420121 BMFQ96LC9 184 aa11.22□□□□□ -0.61
SSBP3-206ENST00000420121 KLF6Q99612 283 aaPredicted RBP11.22□□□□□ -0.61
SSBP3-206ENST00000420121 HAUS4Q9H6D7 363 aa11.22□□□□□ -0.61
SSBP3-206ENST00000420121 LRRC19Q9H756 370 aa11.22□□□□□ -0.61
SSBP3-206ENST00000420121 PDFQ9HBH1 243 aa11.22□□□□□ -0.61
SSBP3-206ENST00000420121 DYRK4Q9NR20 520 aa11.22□□□□□ -0.61
SSBP3-206ENST00000420121 GPATCH2LQ9NWQ4 482 aa11.22□□□□□ -0.61
SSBP3-206ENST00000420121 LHX3Q9UBR4 397 aa11.22□□□□□ -0.61
SSBP3-206ENST00000420121 POM121BA6NF01 834 aa11.21□□□□□ -0.61
SSBP3-206ENST00000420121 TMEM191CA6NGB0 347 aa11.21□□□□□ -0.61
SSBP3-206ENST00000420121 C16orf96A6NNT2 1141 aa11.21□□□□□ -0.61
SSBP3-206ENST00000420121 RASA4BC9J798 803 aa11.21□□□□□ -0.61
SSBP3-206ENST00000420121 AREL1O15033 823 aa11.21□□□□□ -0.61
SSBP3-206ENST00000420121 RASA4O43374 803 aa11.21□□□□□ -0.61
SSBP3-206ENST00000420121 CREB3O43889 395 aa11.21□□□□□ -0.61
SSBP3-206ENST00000420121 MAGEC1O60732 1142 aa11.21□□□□□ -0.61
SSBP3-206ENST00000420121 SDC3O75056 442 aa11.21□□□□□ -0.61
SSBP3-206ENST00000420121 TMCC1O94876 653 aa11.21□□□□□ -0.61
SSBP3-206ENST00000420121 PCDH8O95206 1070 aa11.21□□□□□ -0.61
SSBP3-206ENST00000420121 CCDC172P0C7W6 258 aa11.21□□□□□ -0.61
SSBP3-206ENST00000420121 GZMAP12544 262 aa11.21□□□□□ -0.61
SSBP3-206ENST00000420121 PBX1P40424 430 aa11.21□□□□□ -0.61
SSBP3-206ENST00000420121 CLDN6P56747 220 aa11.21□□□□□ -0.61
SSBP3-206ENST00000420121 GEMIN4P57678 1058 aaKnown RBP11.21□□□□□ -0.61
SSBP3-206ENST00000420121 YBEYP58557 167 aaPredicted RBP11.21□□□□□ -0.61
SSBP3-206ENST00000420121 CCDC15Q0P6D6 951 aa11.21□□□□□ -0.61
SSBP3-206ENST00000420121 SERINC3Q13530 473 aa11.21□□□□□ -0.61
SSBP3-206ENST00000420121 ASIC2Q16515 512 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms