RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 PGBD5Q8N414 524 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 FITM2Q8N6M3 262 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 C2CD4AQ8NCU7 369 aaPredicted RBP9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 ARMC2Q8NEN0 867 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 OR6Y1Q8NGX8 325 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 ATP2A3Q93084 1043 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 PAWRQ96IZ0 340 aaKnown RBP9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 VPS39Q96JC1 886 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 FEM1CQ96JP0 617 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 ZNF778Q96MU6 729 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 AGAP2Q99490 1192 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 DDX50Q9BQ39 737 aaKnown RBP9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 MGME1Q9BQP7 344 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 FAM167BQ9BTA0 163 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 FSD1LQ9BXM9 530 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 ACE2Q9BYF1 805 aaPredicted RBP9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 POLR1EQ9GZS1 481 aaKnown RBP9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 IL21Q9HBE4 155 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 CYP4F11Q9HBI6 524 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 IL23AQ9NPF7 189 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 SNX15Q9NRS6 342 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 C20orf96Q9NUD7 363 aaPredicted RBP9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 TBC1D30Q9Y2I9 924 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 INSL5Q9Y5Q6 135 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 NOTCH4Q99466 2003 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 ATG2AQ2TAZ0 1938 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 WDR91A4D1P6 747 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 MROH6A6NGR9 719 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 KDELR3O43731 214 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 GREM1O60565 184 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 PMPCBO75439 489 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 FGF1P05230 155 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 ATP5BP06576 529 aaKnown RBP9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 CTSAP10619 480 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 PFKLP17858 780 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 CR2P20023 1033 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 HLA-DPA1P20036 260 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 ALDH3A1P30838 453 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 CORO1AP31146 461 aaKnown RBP9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 ETFBP38117 255 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 CD86P42081 329 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 CHRNA4P43681 627 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 SERPINH1P50454 418 aaKnown RBP9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 EPHB3P54753 998 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 NCALDP61601 193 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 PDE1BQ01064 536 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 DSC2Q02487 901 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 BST1Q10588 318 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 TWF1Q12792 350 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 POU6F1Q14863 301 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 PCLAFQ15004 111 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 CCDC153Q494R4 210 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 SPOUT1Q5T280 376 aaKnown RBP9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 TSTD2Q5T7W7 516 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 CES4AQ5XG92 561 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 MBLAC2Q68D91 279 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 ESRP1Q6NXG1 681 aaKnown RBP9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 Q6ZNB5 142 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 NLRP9Q7RTR0 991 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 DNAJB7Q7Z6W7 309 aaPredicted RBP9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 ITIH5Q86UX2 942 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 LMNTD2Q8IXW0 634 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 TMEM199Q8N511 208 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 CLP1Q92989 425 aaKnown RBP9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 E2F7Q96AV8 911 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 PABPC5Q96DU9 382 aaKnown RBP9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 KLHL5Q96PQ7 755 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 PSKH2Q96QS6 385 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 TRIB3Q96RU7 358 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 TRIM55Q9BYV6 548 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 SLC13A1Q9BZW2 595 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 ZNF334Q9HCZ1 680 aaPredicted RBP9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 MRPL17Q9NRX2 175 aaKnown RBP9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 IARS2Q9NSE4 1012 aaKnown RBP9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 IL1RAPL1Q9NZN1 696 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 SEPT3Q9UH03 358 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 CHKBQ9Y259 395 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 SSX2IPQ9Y2D8 614 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 ANKRD6Q9Y2G4 727 aa9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 MTO1Q9Y2Z2 717 aaKnown RBP9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 ZFP37Q9Y6Q3 630 aaPredicted RBP9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 NUP210Q8TEM1 1887 aaPredicted RBP9.16□□□□□ -0.94
LINCMD1-201ENST00000418518 CFAP73A6NFT4 308 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 MUSKO15146 869 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 TEX28O15482 410 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 SLC7A4O43246 635 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 DNAJC6O75061 913 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 TOP3BO95985 862 aaKnown RBP9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 DLDP09622 509 aaKnown RBP9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 FGF3P11487 239 aaPredicted RBP9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 COL6A2P12110 1019 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 RAG1P15918 1043 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 CES1P23141 567 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 GABRB3P28472 473 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 TYK2P29597 1187 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 ELF1P32519 619 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 RPS24P62847 133 aaKnown RBP9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 NSUN2Q08J23 767 aaKnown RBP eCLIP9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 LAMB3Q13751 1172 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 ZNF235Q14590 738 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms