RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 DLG5Q8TDM6 1919 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 ZMYM2Q9UBW7 1377 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 NPATQ14207 1427 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 MAP2P11137 1827 aaKnown RBP2.87□□□□□ -1.95
VPS41-206ENST00000418457 TRBV5-3A0A0A0MS03 114 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 KIR2DS5A0A0G2JLQ3 304 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 TCRBV7S3A2A0A539 114 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 VWA3AA6NCI4 1184 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 TMEM247A6NEH6 219 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 DNAJC9-AS1A6NH13 148 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 KIR2DS3K7RE56 304 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 NCAM2O15394 837 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 CNOT3O75175 753 aaKnown RBP2.87□□□□□ -1.95
VPS41-206ENST00000418457 METTL18O95568 372 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 FGBP02675 491 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 WNT1P04628 370 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 LCKP06239 509 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 CDK4P11802 303 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 ARSAP15289 507 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 CNTFP26441 200 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 TYK2P29597 1187 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 CYP2J2P51589 502 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 MVDP53602 400 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 ARHGAP8P85298 464 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 UBE3AQ05086 875 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 PMPCAQ10713 525 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 CUL4AQ13619 759 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 KLF9Q13886 244 aaPredicted RBP2.87□□□□□ -1.95
VPS41-206ENST00000418457 SEMA3AQ14563 771 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 RBMS2Q15434 407 aaKnown RBP2.87□□□□□ -1.95
VPS41-206ENST00000418457 C5orf22Q49AR2 442 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 ALG10Q5BKT4 473 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 ALG10BQ5I7T1 473 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 DNTTIP2Q5QJE6 756 aaKnown RBP2.87□□□□□ -1.95
VPS41-206ENST00000418457 TTC39AQ5SRH9 613 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 CCDC183Q5T5S1 534 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 C10orf25Q5T742 122 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 MAP3K21Q5TCX8 1036 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 PXDC1Q5TGL8 231 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 VWA5B1Q5TIE3 1220 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 FAM171A1Q5VUB5 890 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 AADACL2Q6P093 401 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 SHC4Q6S5L8 630 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 CPOQ8IVL8 374 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 BRSK2Q8IWQ3 736 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.87□□□□□ -1.95
VPS41-206ENST00000418457 DDIASQ8IXT1 998 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 TMEM217Q8N7C4 229 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 NANOGP1Q8N7R0 232 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 SLC44A5Q8NCS7 719 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 C16orf52Q8NHV5 167 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 C2CD4CQ8TF44 421 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 HERVK_113Q902F9 699 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 KAT2AQ92830 837 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 USP13Q92995 863 aaPredicted RBP2.87□□□□□ -1.95
VPS41-206ENST00000418457 COQ8BQ96D53 544 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 MASTLQ96GX5 879 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 ZFYVE19Q96K21 471 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 REEP2Q9BRK0 252 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 SLC29A3Q9BZD2 475 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 DCTPP1Q9H773 170 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 AAMDCQ9H7C9 122 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 ACAD9Q9H845 621 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 Q9N2J8 555 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 THSD1Q9NS62 852 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 ZNF70Q9UC06 446 aaPredicted RBP2.87□□□□□ -1.95
VPS41-206ENST00000418457 AGO2Q9UKV8 859 aaKnown RBP2.87□□□□□ -1.95
VPS41-206ENST00000418457 GTF2A1LQ9UNN4 478 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 KIF3AQ9Y496 699 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 LRRFIP2Q9Y608 721 aaKnown RBP2.87□□□□□ -1.95
VPS41-206ENST00000418457 PTPRCP08575 1304 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 NRKQ7Z2Y5 1582 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 RTL1A6NKG5 1358 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 ARHGEF10O15013 1369 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 KIAA0232Q92628 1395 aa2.87□□□□□ -1.95
VPS41-206ENST00000418457 CHD2O14647 1828 aaKnown RBP2.86□□□□□ -1.95
VPS41-206ENST00000418457 RGS12O14924 1447 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 ATP10DQ9P241 1426 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 RIMS2Q9UQ26 1411 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 RIMS1Q86UR5 1692 aaKnown RBP2.86□□□□□ -1.95
VPS41-206ENST00000418457 MON2Q7Z3U7 1717 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 SYCE3A1L190 88 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 RRN3P2A6NIE6 340 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 FOXO6A8MYZ6 492 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 PEX12O00623 359 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 KLK10O43240 276 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 STRNO43815 780 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 DHX16O60231 1041 aaKnown RBP2.86□□□□□ -1.95
VPS41-206ENST00000418457 NEURL1O76050 574 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 TOP3BO95985 862 aaKnown RBP2.86□□□□□ -1.95
VPS41-206ENST00000418457 POLBP06746 335 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 WEE2P0C1S8 567 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 ZNF853P0CG23 659 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 FCGR2AP12318 317 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 KLRC2P26717 231 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 PLCD1P51178 756 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 TLE2Q04725 743 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 CHRNDQ07001 517 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 MTX1Q13505 466 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 TRPC3Q13507 836 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms