RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 ZNF135P52742 658 aaPredicted RBP20.95■□□□□ 0.94
PKNOX1-202ENST00000418336 HLA-BQ31612 363 aa20.95■□□□□ 0.94
PKNOX1-202ENST00000418336 MYLK3Q32MK0 819 aa20.95■□□□□ 0.94
PKNOX1-202ENST00000418336 N4BP2L1Q5TBK1 243 aaPredicted RBP20.95■□□□□ 0.94
PKNOX1-202ENST00000418336 TBC1D3GQ6DHY5 549 aa20.95■□□□□ 0.94
PKNOX1-202ENST00000418336 TBC1D3CQ6IPX1 549 aa20.95■□□□□ 0.94
PKNOX1-202ENST00000418336 TBC1D3Q8IZP1 549 aaPredicted RBP20.95■□□□□ 0.94
PKNOX1-202ENST00000418336 NSMCE3Q96MG7 304 aa20.95■□□□□ 0.94
PKNOX1-202ENST00000418336 CSPG4P5Q96PW8 444 aa20.95■□□□□ 0.94
PKNOX1-202ENST00000418336 ZWILCHQ9H900 591 aa20.95■□□□□ 0.94
PKNOX1-202ENST00000418336 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.95■□□□□ 0.94
PKNOX1-202ENST00000418336 SPTLC3Q9NUV7 552 aa20.95■□□□□ 0.94
PKNOX1-202ENST00000418336 UVRAGQ9P2Y5 699 aa20.95■□□□□ 0.94
PKNOX1-202ENST00000418336 HPCAL4Q9UM19 191 aa20.95■□□□□ 0.94
PKNOX1-202ENST00000418336 FARP1Q9Y4F1 1045 aaPredicted RBP20.95■□□□□ 0.94
PKNOX1-202ENST00000418336 INSIG1O15503 277 aa20.94■□□□□ 0.94
PKNOX1-202ENST00000418336 OPHN1O60890 802 aa20.94■□□□□ 0.94
PKNOX1-202ENST00000418336 PROSCO94903 275 aa20.94■□□□□ 0.94
PKNOX1-202ENST00000418336 CD48P09326 243 aa20.94■□□□□ 0.94
PKNOX1-202ENST00000418336 TMEM253P0C7T8 217 aa20.94■□□□□ 0.94
PKNOX1-202ENST00000418336 ZNF883P0CG24 379 aa20.94■□□□□ 0.94
PKNOX1-202ENST00000418336 ADRB3P13945 408 aa20.94■□□□□ 0.94
PKNOX1-202ENST00000418336 ABL2P42684 1182 aa20.94■□□□□ 0.94
PKNOX1-202ENST00000418336 TAS2R40P59535 323 aa20.94■□□□□ 0.94
PKNOX1-202ENST00000418336 SLC14A1Q13336 389 aa20.94■□□□□ 0.94
PKNOX1-202ENST00000418336 FGL2Q14314 439 aa20.94■□□□□ 0.94
PKNOX1-202ENST00000418336 SHBQ15464 509 aa20.94■□□□□ 0.94
PKNOX1-202ENST00000418336 ZNF423Q2M1K9 1284 aa20.94■□□□□ 0.94
PKNOX1-202ENST00000418336 ZNF284Q2VY69 593 aa20.94■□□□□ 0.94
PKNOX1-202ENST00000418336 ATP13A4Q4VNC1 1196 aa20.94■□□□□ 0.94
PKNOX1-202ENST00000418336 TMEM259Q4ZIN3 620 aa20.94■□□□□ 0.94
PKNOX1-202ENST00000418336 PSAPL1Q6NUJ1 521 aa20.94■□□□□ 0.94
PKNOX1-202ENST00000418336 TMEM145Q8NBT3 493 aa20.94■□□□□ 0.94
PKNOX1-202ENST00000418336 DEFB124Q8NES8 71 aa20.94■□□□□ 0.94
PKNOX1-202ENST00000418336 LRIG1Q96JA1 1093 aa20.94■□□□□ 0.94
PKNOX1-202ENST00000418336 ZDHHC6Q9H6R6 413 aa20.94■□□□□ 0.94
PKNOX1-202ENST00000418336 GAREM1Q9H706 876 aa20.94■□□□□ 0.94
PKNOX1-202ENST00000418336 WASF3Q9UPY6 502 aa20.94■□□□□ 0.94
PKNOX1-202ENST00000418336 FADS3Q9Y5Q0 445 aa20.94■□□□□ 0.94
PKNOX1-202ENST00000418336 CABIN1Q9Y6J0 2220 aa20.93■□□□□ 0.94
PKNOX1-202ENST00000418336 AKR1B15C9JRZ8 316 aaPredicted RBP20.93■□□□□ 0.94
PKNOX1-202ENST00000418336 RNGTTO60942 597 aaKnown RBP20.93■□□□□ 0.94
PKNOX1-202ENST00000418336 CBFA2T3O75081 653 aa20.93■□□□□ 0.94
PKNOX1-202ENST00000418336 H2AFZP0C0S5 128 aa20.93■□□□□ 0.94
PKNOX1-202ENST00000418336 AMPD1P23109 780 aa20.93■□□□□ 0.94
PKNOX1-202ENST00000418336 RECQLP46063 649 aaPredicted RBP20.93■□□□□ 0.94
PKNOX1-202ENST00000418336 RGRP47804 291 aa20.93■□□□□ 0.94
PKNOX1-202ENST00000418336 DNA2P51530 1060 aa20.93■□□□□ 0.94
PKNOX1-202ENST00000418336 NEK3P51956 506 aa20.93■□□□□ 0.94
PKNOX1-202ENST00000418336 SNRPD1P62314 119 aaKnown RBP20.93■□□□□ 0.94
PKNOX1-202ENST00000418336 FAM193AP78312 1265 aa20.93■□□□□ 0.94
PKNOX1-202ENST00000418336 NEK5Q6P3R8 708 aa20.93■□□□□ 0.94
PKNOX1-202ENST00000418336 H2AFVQ71UI9 128 aa20.93■□□□□ 0.94
PKNOX1-202ENST00000418336 HSPH1Q92598 858 aa20.93■□□□□ 0.94
PKNOX1-202ENST00000418336 A0A1W2PQU0 124 aa20.92■□□□□ 0.94
PKNOX1-202ENST00000418336 C16orf96A6NNT2 1141 aa20.92■□□□□ 0.94
PKNOX1-202ENST00000418336 H0Y8X5 98 aa20.92■□□□□ 0.94
PKNOX1-202ENST00000418336 MYO1FO00160 1098 aa20.92■□□□□ 0.94
PKNOX1-202ENST00000418336 KCNK3O14649 394 aa20.92■□□□□ 0.94
PKNOX1-202ENST00000418336 MUSKO15146 869 aa20.92■□□□□ 0.94
PKNOX1-202ENST00000418336 AP1G1O43747 822 aa20.92■□□□□ 0.94
PKNOX1-202ENST00000418336 MTA2O94776 668 aa20.92■□□□□ 0.94
PKNOX1-202ENST00000418336 POP4O95707 220 aaKnown RBP20.92■□□□□ 0.94
PKNOX1-202ENST00000418336 CEACAM1P13688 526 aa20.92■□□□□ 0.94
PKNOX1-202ENST00000418336 PMLP29590 882 aa20.92■□□□□ 0.94
PKNOX1-202ENST00000418336 MAT2AP31153 395 aaKnown RBP20.92■□□□□ 0.94
PKNOX1-202ENST00000418336 NOVA1P51513 510 aaKnown RBP20.92■□□□□ 0.94
PKNOX1-202ENST00000418336 ATXN3P54252 364 aaPredicted RBP20.92■□□□□ 0.94
PKNOX1-202ENST00000418336 ZNF805Q5CZA5 627 aa20.92■□□□□ 0.94
PKNOX1-202ENST00000418336 NAPEPLDQ6IQ20 393 aa20.92■□□□□ 0.94
PKNOX1-202ENST00000418336 IL27RAQ6UWB1 636 aa20.92■□□□□ 0.94
PKNOX1-202ENST00000418336 HORMAD1Q86X24 394 aa20.92■□□□□ 0.94
PKNOX1-202ENST00000418336 SPATS2Q86XZ4 545 aaKnown RBP20.92■□□□□ 0.94
PKNOX1-202ENST00000418336 CNGA4Q8IV77 575 aa20.92■□□□□ 0.94
PKNOX1-202ENST00000418336 BAHD1Q8TBE0 780 aaPredicted RBP20.92■□□□□ 0.94
PKNOX1-202ENST00000418336 SERAC1Q96JX3 654 aa20.92■□□□□ 0.94
PKNOX1-202ENST00000418336 CAMK1GQ96NX5 476 aa20.92■□□□□ 0.94
PKNOX1-202ENST00000418336 GGT7Q9UJ14 662 aa20.92■□□□□ 0.94
PKNOX1-202ENST00000418336 ASPMQ8IZT6 3477 aa20.91■□□□□ 0.94
PKNOX1-202ENST00000418336 KRIT1O00522 736 aa20.91■□□□□ 0.94
PKNOX1-202ENST00000418336 AREL1O15033 823 aa20.91■□□□□ 0.94
PKNOX1-202ENST00000418336 BUB1BO60566 1050 aaPredicted RBP20.91■□□□□ 0.94
PKNOX1-202ENST00000418336 ZNF75DP51815 510 aa20.91■□□□□ 0.94
PKNOX1-202ENST00000418336 RHOAP61586 193 aa20.91■□□□□ 0.94
PKNOX1-202ENST00000418336 TCEAL1Q15170 157 aa20.91■□□□□ 0.94
PKNOX1-202ENST00000418336 SEL1L3Q68CR1 1132 aa20.91■□□□□ 0.94
PKNOX1-202ENST00000418336 CTNNBL1Q8WYA6 563 aaPredicted RBP20.91■□□□□ 0.94
PKNOX1-202ENST00000418336 PPP1R16AQ96I34 528 aa20.91■□□□□ 0.94
PKNOX1-202ENST00000418336 EXOC2Q96KP1 924 aa20.91■□□□□ 0.94
PKNOX1-202ENST00000418336 GDAP1L1Q96MZ0 367 aa20.91■□□□□ 0.94
PKNOX1-202ENST00000418336 TRIM5Q9C035 493 aa20.91■□□□□ 0.94
PKNOX1-202ENST00000418336 CTTNBP2NLQ9P2B4 639 aa20.91■□□□□ 0.94
PKNOX1-202ENST00000418336 UBA2Q9UBT2 640 aaPredicted RBP20.91■□□□□ 0.94
PKNOX1-202ENST00000418336 DMTF1Q9Y222 760 aa20.91■□□□□ 0.94
PKNOX1-202ENST00000418336 CA5BQ9Y2D0 317 aa20.91■□□□□ 0.94
PKNOX1-202ENST00000418336 TSPAN11A1L157 253 aa20.9■□□□□ 0.94
PKNOX1-202ENST00000418336 ARHGAP42A6NI28 874 aa20.9■□□□□ 0.94
PKNOX1-202ENST00000418336 H3BRJ5 948 aa20.9■□□□□ 0.94
PKNOX1-202ENST00000418336 SH3BP5O60239 455 aa20.9■□□□□ 0.94
PKNOX1-202ENST00000418336 LCA5LO95447 670 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms