RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 SLC12A3P55017 1021 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 WNT3P56703 355 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 HUNKP57058 714 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 UBASH3AP57075 661 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 GSDMDP57764 484 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 E2F1Q01094 437 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 SP4Q02446 784 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 SLC13A2Q13183 592 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 KLF9Q13886 244 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 KCNJ12Q14500 433 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 STXBP2Q15833 593 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 ETFDHQ16134 617 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 ZIK1Q3SY52 487 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 HERC4Q5GLZ8 1057 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 FCRL6Q6DN72 434 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 ZNF425Q6IV72 752 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 SEPT14Q6ZU15 432 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 ANKRD23Q86SG2 305 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 CHSY1Q86X52 802 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 SFR1Q86XK3 245 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 CATSPER3Q86XQ3 398 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 SMAP1Q8IYB5 467 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 MYOCDQ8IZQ8 938 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 ABRAQ8N0Z2 381 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 ADSSL1Q8N142 457 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 CSGALNACT2Q8N6G5 542 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 SYT2Q8N9I0 419 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 CCDC150Q8NCX0 1101 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 RDM1Q8NG50 284 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 SLC35G2Q8TBE7 412 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 BPIFB1Q8TDL5 484 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 LRRC15Q8TF66 581 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 KBTBD7Q8WVZ9 684 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 ATP6V0A1Q93050 837 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 P2RX5Q93086 422 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 PPP2R3CQ969Q6 453 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 DHTKD1Q96HY7 919 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 C5orf34Q96MH7 638 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 ASB2Q96Q27 587 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 TAAR9Q96RI9 348 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 IWS1Q96ST2 819 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 MESP1Q9BRJ9 268 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 MOV10L1Q9BXT6 1211 aaKnown RBP4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 TRIM54Q9BYV2 358 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 BHMT2Q9H2M3 363 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 MROH8Q9H579 483 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 THAP9Q9H5L6 903 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 RGL1Q9NZL6 768 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 SLC9A2Q9UBY0 812 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 TBC1D30Q9Y2I9 924 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 SLC45A1Q9Y2W3 748 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 NFASCO94856 1347 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 UBE4BO95155 1302 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 KCNU1A8MYU2 1149 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 BTBD19C9JJ37 291 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 K7ENM7 598 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 PSMD9O00233 223 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 AP5Z1O43299 807 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 USO1O60763 962 aaKnown RBP4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 EIF3JO75822 258 aaKnown RBP4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 CNMDO75829 334 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 GCNT3O95395 438 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 TUBB4AP04350 444 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 PRKCBP05771 671 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 ATP1A3P13637 1013 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 SFPQP23246 707 aaKnown RBP eCLIP4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 FPR3P25089 353 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 EEF1GP26641 437 aaKnown RBP4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 SLC7A1P30825 629 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 MTIF2P46199 727 aaKnown RBP4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 QARSP47897 775 aaKnown RBP4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 KRTAP10-11P60412 298 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 PSMC5P62195 406 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 LRRC63Q05C16 580 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 STK4Q13043 487 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 ITGB3BPQ13352 177 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 RAB32Q13637 225 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 CCDC40Q4G0X9 1142 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 COBLL1Q53SF7 1204 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 XKR9Q5GH70 373 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 SLC9A4Q6AI14 798 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 MIS18BP1Q6P0N0 1132 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 KIRREL2Q6UWL6 708 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 TRMT1LQ7Z2T5 733 aaKnown RBP4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 CCDC186Q7Z3E2 898 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 C1QL2Q7Z5L3 287 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 ZSCAN30Q86W11 494 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 NELFCDQ8IXH7 590 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 IZUMO1Q8IYV9 350 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 SPARTQ8N0X7 666 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 GUF1Q8N442 669 aaKnown RBP4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 ANKRD13CQ8N6S4 541 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 KIAA0895Q8NCT3 520 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 GPRC5AQ8NFJ5 357 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 DENND1AQ8TEH3 1009 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 PIGOQ8TEQ8 1089 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 SOCS4Q8WXH5 440 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 BRI3BPQ8WY22 251 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 RPL36ALQ969Q0 106 aaKnown RBP4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 CNOT6LQ96LI5 555 aaKnown RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms