RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 CAB39Q9Y376 341 aaPredicted RBP12.96□□□□□ -0.33
SCAF8-203ENST00000417268 TCHHQ07283 1943 aa12.96□□□□□ -0.34
SCAF8-203ENST00000417268 A0A087WXM4 84 aa12.96□□□□□ -0.34
SCAF8-203ENST00000417268 CAPN15O75808 1086 aa12.96□□□□□ -0.34
SCAF8-203ENST00000417268 GPR158Q5T848 1215 aa12.96□□□□□ -0.34
SCAF8-203ENST00000417268 MAB21L3Q8N8X9 362 aa12.96□□□□□ -0.34
SCAF8-203ENST00000417268 TFAP2BQ92481 460 aa12.96□□□□□ -0.34
SCAF8-203ENST00000417268 TTYH3Q9C0H2 523 aa12.96□□□□□ -0.34
SCAF8-203ENST00000417268 DPEP3Q9H4B8 488 aa12.96□□□□□ -0.34
SCAF8-203ENST00000417268 SAE1Q9UBE0 346 aaPredicted RBP12.96□□□□□ -0.34
SCAF8-203ENST00000417268 SLC13A4Q9UKG4 626 aa12.96□□□□□ -0.34
SCAF8-203ENST00000417268 ITGB1BP2Q9UKP3 347 aa12.96□□□□□ -0.34
SCAF8-203ENST00000417268 FBXL21Q9UKT6 434 aa12.96□□□□□ -0.34
SCAF8-203ENST00000417268 FAM50BQ9Y247 325 aa12.96□□□□□ -0.34
SCAF8-203ENST00000417268 RAD54BQ9Y620 910 aa12.96□□□□□ -0.34
SCAF8-203ENST00000417268 SCN7AQ01118 1682 aa12.96□□□□□ -0.34
SCAF8-203ENST00000417268 CLUHO75153 1309 aa12.96□□□□□ -0.34
SCAF8-203ENST00000417268 NAV1Q8NEY1 1877 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 LINC00854A0A1B0GVQ3 168 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 CYP2A6P11509 494 aaPredicted RBP12.95□□□□□ -0.34
SCAF8-203ENST00000417268 TPH1P17752 444 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 RPS6KA3P51812 740 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 NME5P56597 212 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 TAS2R40P59535 323 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 TRAF2Q12933 501 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 NANOGNBQ7Z5D8 188 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 SNX32Q86XE0 403 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 KLHL23Q8NBE8 558 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 ZNF516Q92618 1163 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 TBL1YQ9BQ87 522 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 NEUROG2Q9H2A3 272 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 SEMA6AQ9H2E6 1030 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 FBXO6Q9NRD1 293 aaPredicted RBP12.95□□□□□ -0.34
SCAF8-203ENST00000417268 MRPL42Q9Y6G3 142 aaKnown RBP12.95□□□□□ -0.34
SCAF8-203ENST00000417268 DYTNA2CJ06 578 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 LIASO43766 372 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 EDF1O60869 148 aaKnown RBP12.95□□□□□ -0.34
SCAF8-203ENST00000417268 ASPAP45381 313 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 SOWAHAQ2M3V2 549 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 AGKQ53H12 422 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 ATAT1Q5SQI0 421 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 FAM43BQ6ZT52 329 aaPredicted RBP12.95□□□□□ -0.34
SCAF8-203ENST00000417268 TCF25Q9BQ70 676 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 TMEM175Q9BSA9 504 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 RCOR3Q9P2K3 495 aaPredicted RBP12.95□□□□□ -0.34
SCAF8-203ENST00000417268 TBC1D14Q9P2M4 693 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 STYXL1Q9Y6J8 313 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 FSCN2O14926 492 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 H2AFYO75367 372 aaKnown RBP12.95□□□□□ -0.34
SCAF8-203ENST00000417268 PAGE1O75459 146 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 FKBP9O95302 570 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 CYBAP13498 195 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 CCNB1P14635 433 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 LMO2P25791 158 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 NR1H2P55055 460 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 CSE1LP55060 971 aaKnown RBP12.95□□□□□ -0.34
SCAF8-203ENST00000417268 PKNOX1P55347 436 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 ITGADQ13349 1161 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 SLC39A4Q6P5W5 647 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 FKBP9P1Q75LS8 142 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 OTOAQ7RTW8 1153 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 PSTKQ8IV42 348 aaKnown RBP12.95□□□□□ -0.34
SCAF8-203ENST00000417268 SPATA16Q9BXB7 569 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 RMI1Q9H9A7 625 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 COPG2Q9UBF2 871 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 PCDHGB4Q9UN71 923 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 ACOT9Q9Y305 439 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 SUPT7LO94864 414 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 PGAM1P18669 254 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 PPP3CCP48454 512 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 SGCGQ13326 291 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 CST9Q5W186 159 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 EFL1Q7Z2Z2 1120 aaKnown RBP12.95□□□□□ -0.34
SCAF8-203ENST00000417268 PTAR1Q7Z6K3 402 aaPredicted RBP12.95□□□□□ -0.34
SCAF8-203ENST00000417268 HHIPL1Q96JK4 782 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 C17orf80Q9BSJ5 609 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 NOL6Q9H6R4 1146 aaKnown RBP12.95□□□□□ -0.34
SCAF8-203ENST00000417268 LRRC19Q9H756 370 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 PCDH18Q9HCL0 1135 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 NOCTQ9UK39 431 aaKnown RBP12.95□□□□□ -0.34
SCAF8-203ENST00000417268 NCKAP1Q9Y2A7 1128 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 EFR3BQ9Y2G0 817 aa12.95□□□□□ -0.34
SCAF8-203ENST00000417268 VIRMAQ69YN4 1812 aaKnown RBP12.94□□□□□ -0.34
SCAF8-203ENST00000417268 IGKV6D-21A0A0A0MT36 114 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 CYP1A1P04798 512 aaPredicted RBP12.94□□□□□ -0.34
SCAF8-203ENST00000417268 MGAT1P26572 445 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 PTPN9P43378 593 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 MMRN1Q13201 1228 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 TMEM63BQ5T3F8 832 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 CYP2R1Q6VVX0 501 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 TSPAN14Q8NG11 270 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 DQX1Q8TE96 717 aaKnown RBP12.94□□□□□ -0.34
SCAF8-203ENST00000417268 DGCR14Q96DF8 476 aaKnown RBP12.94□□□□□ -0.34
SCAF8-203ENST00000417268 CCDC126Q96EE4 140 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 SUSD3Q96L08 255 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 GAS2L1Q99501 681 aaPredicted RBP12.94□□□□□ -0.34
SCAF8-203ENST00000417268 ZCCHC2Q9C0B9 1178 aaKnown RBP12.94□□□□□ -0.34
SCAF8-203ENST00000417268 PARVBQ9HBI1 364 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 RUVBL2Q9Y230 463 aaKnown RBP12.94□□□□□ -0.34
SCAF8-203ENST00000417268 RGS5O15539 181 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms