RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 SLC17A9Q9BYT1 436 aa18.18■□□□□ 0.5
CPNE1-210ENST00000416778 TM6SF2Q9BZW4 377 aa18.18■□□□□ 0.5
CPNE1-210ENST00000416778 DDX3XO00571 662 aaKnown RBP eCLIP18.17■□□□□ 0.51e-13■■■□□ 15.3
CPNE1-210ENST00000416778 BUB1O43683 1085 aa18.17■□□□□ 0.5
CPNE1-210ENST00000416778 AP1G1O43747 822 aa18.17■□□□□ 0.5
CPNE1-210ENST00000416778 CREB3O43889 395 aa18.17■□□□□ 0.5
CPNE1-210ENST00000416778 PAK4O96013 591 aaPredicted RBP18.17■□□□□ 0.5
CPNE1-210ENST00000416778 GSRP00390 522 aa18.17■□□□□ 0.5
CPNE1-210ENST00000416778 ASIC2Q16515 512 aa18.17■□□□□ 0.5
CPNE1-210ENST00000416778 INAVAQ3KP66 663 aa18.17■□□□□ 0.5
CPNE1-210ENST00000416778 INO80DQ53TQ3 878 aaPredicted RBP18.17■□□□□ 0.5
CPNE1-210ENST00000416778 ZNF805Q5CZA5 627 aa18.17■□□□□ 0.5
CPNE1-210ENST00000416778 SFMBT2Q5VUG0 894 aa18.17■□□□□ 0.5
CPNE1-210ENST00000416778 TMC6Q7Z403 805 aa18.17■□□□□ 0.5
CPNE1-210ENST00000416778 UMODL1-AS1Q8N2C9 162 aa18.17■□□□□ 0.5
CPNE1-210ENST00000416778 OR2AP1Q8NGE2 309 aa18.17■□□□□ 0.5
CPNE1-210ENST00000416778 TTYH3Q9C0H2 523 aa18.17■□□□□ 0.5
CPNE1-210ENST00000416778 ZDHHC6Q9H6R6 413 aa18.17■□□□□ 0.5
CPNE1-210ENST00000416778 KLHL11Q9NVR0 708 aa18.17■□□□□ 0.5
CPNE1-210ENST00000416778 FTSJ1Q9UET6 329 aa18.17■□□□□ 0.5
CPNE1-210ENST00000416778 FREM2Q5SZK8 3169 aa18.17■□□□□ 0.5
CPNE1-210ENST00000416778 ZSCAN5CA6NGD5 496 aaPredicted RBP18.16■□□□□ 0.5
CPNE1-210ENST00000416778 SRRM3A6NNA2 597 aaPredicted RBP18.16■□□□□ 0.5
CPNE1-210ENST00000416778 C16orf96A6NNT2 1141 aa18.16■□□□□ 0.5
CPNE1-210ENST00000416778 RASA4BC9J798 803 aa18.16■□□□□ 0.5
CPNE1-210ENST00000416778 RASA4O43374 803 aa18.16■□□□□ 0.5
CPNE1-210ENST00000416778 THEGLP0DJG4 465 aa18.16■□□□□ 0.5
CPNE1-210ENST00000416778 SKILP12757 684 aa18.16■□□□□ 0.5
CPNE1-210ENST00000416778 HNRNPA2B1P22626 353 aaKnown RBP18.16■□□□□ 0.5
CPNE1-210ENST00000416778 AKT2P31751 481 aa18.16■□□□□ 0.5
CPNE1-210ENST00000416778 CLDN2P57739 230 aa18.16■□□□□ 0.5
CPNE1-210ENST00000416778 SNRPD1P62314 119 aaKnown RBP18.16■□□□□ 0.5
CPNE1-210ENST00000416778 RPS21P63220 83 aaKnown RBP18.16■□□□□ 0.5
CPNE1-210ENST00000416778 SERINC3Q13530 473 aa18.16■□□□□ 0.5
CPNE1-210ENST00000416778 SMAD1Q15797 465 aaKnown RBP18.16■□□□□ 0.5
CPNE1-210ENST00000416778 PARS2Q7L3T8 475 aaKnown RBP18.16■□□□□ 0.5
CPNE1-210ENST00000416778 ABI3BPQ7Z7G0 1075 aa18.16■□□□□ 0.5
CPNE1-210ENST00000416778 MARCH9Q86YJ5 346 aa18.16■□□□□ 0.5
CPNE1-210ENST00000416778 SLC25A45Q8N413 288 aa18.16■□□□□ 0.5
CPNE1-210ENST00000416778 RYBPQ8N488 228 aaPredicted RBP18.16■□□□□ 0.5
CPNE1-210ENST00000416778 OR6K2Q8NGY2 324 aa18.16■□□□□ 0.5
CPNE1-210ENST00000416778 ZCCHC14Q8WYQ9 949 aaKnown RBP18.16■□□□□ 0.5
CPNE1-210ENST00000416778 TSC1Q92574 1164 aa18.16■□□□□ 0.5
CPNE1-210ENST00000416778 HMCESQ96FZ2 354 aa18.16■□□□□ 0.5
CPNE1-210ENST00000416778 CNDP2Q96KP4 475 aaKnown RBP18.16■□□□□ 0.5
CPNE1-210ENST00000416778 EPAS1Q99814 870 aa18.16■□□□□ 0.5
CPNE1-210ENST00000416778 MYOCQ99972 504 aa18.16■□□□□ 0.5
CPNE1-210ENST00000416778 C1QTNF2Q9BXJ5 285 aa18.16■□□□□ 0.5
CPNE1-210ENST00000416778 CATSPERBQ9H7T0 1116 aa18.16■□□□□ 0.5
CPNE1-210ENST00000416778 FZD3Q9NPG1 666 aa18.16■□□□□ 0.5
CPNE1-210ENST00000416778 NYNRINQ9P2P1 1898 aaKnown RBP18.16■□□□□ 0.5
CPNE1-210ENST00000416778 KNTC1P50748 2209 aa18.15■□□□□ 0.5
CPNE1-210ENST00000416778 KRIT1O00522 736 aa18.15■□□□□ 0.5
CPNE1-210ENST00000416778 ENC1O14682 589 aa18.15■□□□□ 0.5
CPNE1-210ENST00000416778 CYTH1Q15438 398 aa18.15■□□□□ 0.5
CPNE1-210ENST00000416778 ATXN7L2Q5T6C5 722 aaPredicted RBP18.15■□□□□ 0.5
CPNE1-210ENST00000416778 ERMARDQ5T6L9 678 aa18.15■□□□□ 0.5
CPNE1-210ENST00000416778 KIAA1161Q6NSJ0 714 aa18.15■□□□□ 0.5
CPNE1-210ENST00000416778 NETO2Q8NC67 525 aa18.15■□□□□ 0.5
CPNE1-210ENST00000416778 OR13H1Q8NG92 308 aa18.15■□□□□ 0.5
CPNE1-210ENST00000416778 CASKIN2Q8WXE0 1202 aa18.15■□□□□ 0.5
CPNE1-210ENST00000416778 RAB7BQ96AH8 199 aa18.15■□□□□ 0.5
CPNE1-210ENST00000416778 TRIM7Q9C029 511 aa18.15■□□□□ 0.5
CPNE1-210ENST00000416778 MFHAS1Q9Y4C4 1052 aa18.15■□□□□ 0.5
CPNE1-210ENST00000416778 PCDHGA1Q9Y5H4 931 aa18.15■□□□□ 0.5
CPNE1-210ENST00000416778 PLXNB3Q9ULL4 1909 aa18.15■□□□□ 0.5
CPNE1-210ENST00000416778 ARID1BQ8NFD5 2236 aaPredicted RBP18.15■□□□□ 0.5
CPNE1-210ENST00000416778 CHD5Q8TDI0 1954 aa18.15■□□□□ 0.5
CPNE1-210ENST00000416778 IGLON5A6NGN9 336 aa18.14■□□□□ 0.49
CPNE1-210ENST00000416778 RAD51BO15315 384 aa18.14■□□□□ 0.49
CPNE1-210ENST00000416778 TSPAN6O43657 245 aa18.14■□□□□ 0.49
CPNE1-210ENST00000416778 TMCC1O94876 653 aa18.14■□□□□ 0.49
CPNE1-210ENST00000416778 SERPINC1P01008 464 aa18.14■□□□□ 0.49
CPNE1-210ENST00000416778 C1SP09871 688 aa18.14■□□□□ 0.49
CPNE1-210ENST00000416778 PSMA2P25787 234 aa18.14■□□□□ 0.49
CPNE1-210ENST00000416778 HTR7P34969 479 aa18.14■□□□□ 0.49
CPNE1-210ENST00000416778 ABL2P42684 1182 aa18.14■□□□□ 0.49
CPNE1-210ENST00000416778 KLHL30Q0D2K2 578 aa18.14■□□□□ 0.49
CPNE1-210ENST00000416778 DNAJC3Q13217 504 aa18.14■□□□□ 0.49
CPNE1-210ENST00000416778 MAPK8IP2Q13387 824 aaPredicted RBP18.14■□□□□ 0.49
CPNE1-210ENST00000416778 CA9Q16790 459 aa18.14■□□□□ 0.49
CPNE1-210ENST00000416778 PARP15Q460N3 678 aa18.14■□□□□ 0.49
CPNE1-210ENST00000416778 CCDC157Q569K6 752 aa18.14■□□□□ 0.49
CPNE1-210ENST00000416778 FIGNQ5HY92 759 aa18.14■□□□□ 0.49
CPNE1-210ENST00000416778 DHRS13Q6UX07 377 aa18.14■□□□□ 0.49
CPNE1-210ENST00000416778 GDPD4Q6W3E5 623 aa18.14■□□□□ 0.49
CPNE1-210ENST00000416778 GCNT7Q6ZNI0 430 aa18.14■□□□□ 0.49
CPNE1-210ENST00000416778 Q6ZSR6 202 aa18.14■□□□□ 0.49
CPNE1-210ENST00000416778 TTC7BQ86TV6 843 aa18.14■□□□□ 0.49
CPNE1-210ENST00000416778 GALNT15Q8N3T1 639 aa18.14■□□□□ 0.49
CPNE1-210ENST00000416778 FAM174AQ8TBP5 190 aa18.14■□□□□ 0.49
CPNE1-210ENST00000416778 ASB12Q8WXK4 309 aa18.14■□□□□ 0.49
CPNE1-210ENST00000416778 KLHL32Q96NJ5 620 aa18.14■□□□□ 0.49
CPNE1-210ENST00000416778 LENG8Q96PV6 779 aaPredicted RBP18.14■□□□□ 0.49
CPNE1-210ENST00000416778 KLF6Q99612 283 aaPredicted RBP18.14■□□□□ 0.49
CPNE1-210ENST00000416778 ISCUQ9H1K1 167 aa18.14■□□□□ 0.49
CPNE1-210ENST00000416778 LRRC19Q9H756 370 aa18.14■□□□□ 0.49
CPNE1-210ENST00000416778 CAAP1Q9H8G2 361 aa18.14■□□□□ 0.49
CPNE1-210ENST00000416778 CBX8Q9HC52 389 aa18.14■□□□□ 0.49
CPNE1-210ENST00000416778 GPATCH2LQ9NWQ4 482 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms