RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 PRKCHP24723 683 aa11.76□□□□□ -0.53
RFFL-205ENST00000415395 CA8P35219 290 aa11.76□□□□□ -0.53
RFFL-205ENST00000415395 SH3BGRP55822 239 aaPredicted RBP11.76□□□□□ -0.53
RFFL-205ENST00000415395 TMPRSS15P98073 1019 aa11.76□□□□□ -0.53
RFFL-205ENST00000415395 KHDC1Q4VXA5 237 aaKnown RBP11.76□□□□□ -0.53
RFFL-205ENST00000415395 STXBP5Q5T5C0 1151 aa11.76□□□□□ -0.53
RFFL-205ENST00000415395 TIGD7Q6NT04 549 aaPredicted RBP11.76□□□□□ -0.53
RFFL-205ENST00000415395 TMEM154Q6P9G4 183 aa11.76□□□□□ -0.53
RFFL-205ENST00000415395 ARHGAP12Q8IWW6 846 aa11.76□□□□□ -0.53
RFFL-205ENST00000415395 UMODL1-AS1Q8N2C9 162 aa11.76□□□□□ -0.53
RFFL-205ENST00000415395 KREMEN2Q8NCW0 462 aa11.76□□□□□ -0.53
RFFL-205ENST00000415395 POF1BQ8WVV4 589 aa11.76□□□□□ -0.53
RFFL-205ENST00000415395 NR1H4Q96RI1 486 aaPredicted RBP11.76□□□□□ -0.53
RFFL-205ENST00000415395 KLF6Q99612 283 aaPredicted RBP11.76□□□□□ -0.53
RFFL-205ENST00000415395 FAM192AQ9GZU8 254 aa11.76□□□□□ -0.53
RFFL-205ENST00000415395 GPAMQ9HCL2 828 aa11.76□□□□□ -0.53
RFFL-205ENST00000415395 PCDH10Q9P2E7 1040 aa11.76□□□□□ -0.53
RFFL-205ENST00000415395 PDP2Q9P2J9 529 aa11.76□□□□□ -0.53
RFFL-205ENST00000415395 CHD5Q8TDI0 1954 aa11.75□□□□□ -0.53
RFFL-205ENST00000415395 ACSL4O60488 711 aa11.75□□□□□ -0.53
RFFL-205ENST00000415395 SMIM24O75264 130 aa11.75□□□□□ -0.53
RFFL-205ENST00000415395 FKBP6O75344 327 aa11.75□□□□□ -0.53
RFFL-205ENST00000415395 FGF19O95750 216 aa11.75□□□□□ -0.53
RFFL-205ENST00000415395 OLFM2O95897 454 aa11.75□□□□□ -0.53
RFFL-205ENST00000415395 C8AP07357 584 aa11.75□□□□□ -0.53
RFFL-205ENST00000415395 LINGO3P0C6S8 592 aa11.75□□□□□ -0.53
RFFL-205ENST00000415395 MAPKAPK2P49137 400 aa11.75□□□□□ -0.53
RFFL-205ENST00000415395 SESN3P58005 492 aa11.75□□□□□ -0.53
RFFL-205ENST00000415395 ERVFC1P60507 584 aa11.75□□□□□ -0.53
RFFL-205ENST00000415395 WASHC5Q12768 1159 aa11.75□□□□□ -0.53
RFFL-205ENST00000415395 ITPRIPL1Q6GPH6 555 aa11.75□□□□□ -0.53
RFFL-205ENST00000415395 C14orf80Q86SX3 495 aa11.75□□□□□ -0.53
RFFL-205ENST00000415395 NUDCD3Q8IVD9 361 aa11.75□□□□□ -0.53
RFFL-205ENST00000415395 ATPAF2Q8N5M1 289 aa11.75□□□□□ -0.53
RFFL-205ENST00000415395 PPM1NQ8N819 430 aa11.75□□□□□ -0.53
RFFL-205ENST00000415395 SCG3Q8WXD2 468 aaKnown RBP11.75□□□□□ -0.53
RFFL-205ENST00000415395 DPF3Q92784 378 aa11.75□□□□□ -0.53
RFFL-205ENST00000415395 ATP2A3Q93084 1043 aa11.75□□□□□ -0.53
RFFL-205ENST00000415395 CFAP36Q96G28 342 aa11.75□□□□□ -0.53
RFFL-205ENST00000415395 SERAC1Q96JX3 654 aa11.75□□□□□ -0.53
RFFL-205ENST00000415395 PPP1R2P1Q96PQ5 205 aa11.75□□□□□ -0.53
RFFL-205ENST00000415395 DDX50Q9BQ39 737 aaKnown RBP11.75□□□□□ -0.53
RFFL-205ENST00000415395 WDR83Q9BRX9 315 aaKnown RBP11.75□□□□□ -0.53
RFFL-205ENST00000415395 KLF16Q9BXK1 252 aaPredicted RBP11.75□□□□□ -0.53
RFFL-205ENST00000415395 C1orf21Q9H246 121 aa11.75□□□□□ -0.53
RFFL-205ENST00000415395 KCNK13Q9HB14 408 aa11.75□□□□□ -0.53
RFFL-205ENST00000415395 IL21Q9HBE4 155 aa11.75□□□□□ -0.53
RFFL-205ENST00000415395 SLC24A3Q9HC58 644 aa11.75□□□□□ -0.53
RFFL-205ENST00000415395 XAB2Q9HCS7 855 aaKnown RBP11.75□□□□□ -0.53
RFFL-205ENST00000415395 TAS2R1Q9NYW7 299 aa11.75□□□□□ -0.53
RFFL-205ENST00000415395 VANGL2Q9ULK5 521 aa11.75□□□□□ -0.53
RFFL-205ENST00000415395 PLLPQ9Y342 182 aa11.75□□□□□ -0.53
RFFL-205ENST00000415395 NYNRINQ9P2P1 1898 aaKnown RBP11.75□□□□□ -0.53
RFFL-205ENST00000415395 MYO18AQ92614 2054 aaKnown RBP11.75□□□□□ -0.53
RFFL-205ENST00000415395 TCRBV7S3A2A0A539 114 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 CCDC189A1A4V9 331 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 F5H5T6 163 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 PDHA1P08559 390 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 MLNP12872 115 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 TACR2P21452 398 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 PTPN3P26045 913 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 CDC25CP30307 473 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 HOXA9P31269 272 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 NRLP54845 237 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 IRX4P78413 519 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 NAB1Q13506 487 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 RCN2Q14257 317 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 ACSBG2Q5FVE4 666 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 PLPP4Q5VZY2 271 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 RAP1GAP2Q684P5 730 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 FBXL22Q6P050 247 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 KYAT3Q6YP21 454 aaKnown RBP11.74□□□□□ -0.53
RFFL-205ENST00000415395 SH2D5Q6ZV89 423 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 TMEM150AQ86TG1 271 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 WDR75Q8IWA0 830 aaKnown RBP11.74□□□□□ -0.53
RFFL-205ENST00000415395 SCUBE1Q8IWY4 988 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 ZNF567Q8N184 647 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 PPP1R14CQ8TAE6 165 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 GSDMBQ8TAX9 411 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 ACMSDQ8TDX5 336 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 PTPRN2Q92932 1015 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 ZNF184Q99676 751 aaPredicted RBP11.74□□□□□ -0.53
RFFL-205ENST00000415395 YIPF3Q9GZM5 350 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 ALG13Q9NP73 1137 aaKnown RBP11.74□□□□□ -0.53
RFFL-205ENST00000415395 SIRPGQ9P1W8 387 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 TTLL3Q9Y4R7 772 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 PCDHA11Q9Y5I1 949 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 NR2E3Q9Y5X4 410 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 HELZP42694 1942 aaKnown RBP11.74□□□□□ -0.53
RFFL-205ENST00000415395 ARHGAP42A6NI28 874 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 ERI2A8K979 691 aaKnown RBP11.74□□□□□ -0.53
RFFL-205ENST00000415395 B2RBV5 119 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 SKAP2O75563 359 aaPredicted RBP11.74□□□□□ -0.53
RFFL-205ENST00000415395 STC2O76061 302 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 KLHL2O95198 593 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 METTL18O95568 372 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 APRTP07741 180 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 SERPINA6P08185 405 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 HMBSP08397 361 aa11.74□□□□□ -0.53
RFFL-205ENST00000415395 CRHR1P34998 444 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms