RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 FERMT1Q9BQL6 677 aa15.78■□□□□ 0.12
SHMT2-202ENST00000414700 KDM4CQ9H3R0 1056 aa15.78■□□□□ 0.12
SHMT2-202ENST00000414700 FAM114A2Q9NRY5 505 aa15.78■□□□□ 0.12
SHMT2-202ENST00000414700 WHRNQ9P202 907 aa15.78■□□□□ 0.12
SHMT2-202ENST00000414700 KIAA1522Q9P206 1035 aaPredicted RBP15.78■□□□□ 0.12
SHMT2-202ENST00000414700 FARP1Q9Y4F1 1045 aaPredicted RBP15.78■□□□□ 0.12
SHMT2-202ENST00000414700 A0A0C4DFX4 3053 aa15.77■□□□□ 0.12
SHMT2-202ENST00000414700 MTSS1O43312 755 aa15.77■□□□□ 0.12
SHMT2-202ENST00000414700 CACNG3O60359 315 aa15.77■□□□□ 0.12
SHMT2-202ENST00000414700 ECI2O75521 394 aa15.77■□□□□ 0.12
SHMT2-202ENST00000414700 STK10O94804 968 aaKnown RBP15.77■□□□□ 0.12
SHMT2-202ENST00000414700 TMEM63AO94886 807 aa15.77■□□□□ 0.12
SHMT2-202ENST00000414700 NFATC1O95644 943 aa15.77■□□□□ 0.12
SHMT2-202ENST00000414700 NFKB1P19838 968 aa15.77■□□□□ 0.12
SHMT2-202ENST00000414700 CALCOCO2Q13137 446 aa15.77■□□□□ 0.12
SHMT2-202ENST00000414700 MTM1Q13496 603 aa15.77■□□□□ 0.12
SHMT2-202ENST00000414700 HNRNPDQ14103 355 aaKnown RBP15.77■□□□□ 0.12
SHMT2-202ENST00000414700 MARC1Q5VT66 337 aa15.77■□□□□ 0.12
SHMT2-202ENST00000414700 TMEM215Q68D42 235 aa15.77■□□□□ 0.12
SHMT2-202ENST00000414700 ZNF783Q6ZMS7 281 aa15.77■□□□□ 0.12
SHMT2-202ENST00000414700 CCDC117Q8IWD4 279 aaPredicted RBP15.77■□□□□ 0.12
SHMT2-202ENST00000414700 PGBD5Q8N414 524 aa15.77■□□□□ 0.12
SHMT2-202ENST00000414700 EIF1ADQ8N9N8 165 aaKnown RBP15.77■□□□□ 0.12
SHMT2-202ENST00000414700 ART4Q93070 314 aa15.77■□□□□ 0.12
SHMT2-202ENST00000414700 E2F7Q96AV8 911 aa15.77■□□□□ 0.12
SHMT2-202ENST00000414700 CHFRQ96EP1 664 aa15.77■□□□□ 0.12
SHMT2-202ENST00000414700 UBP1Q9NZI7 540 aa15.77■□□□□ 0.12
SHMT2-202ENST00000414700 ANHXE9PGG2 379 aa15.77■□□□□ 0.11
SHMT2-202ENST00000414700 GOLGA8MH3BSY2 632 aa15.77■□□□□ 0.11
SHMT2-202ENST00000414700 K7ERQ8 282 aa15.77■□□□□ 0.11
SHMT2-202ENST00000414700 ARNTLO00327 626 aa15.77■□□□□ 0.11
SHMT2-202ENST00000414700 HOXC11O43248 304 aaPredicted RBP15.77■□□□□ 0.11
SHMT2-202ENST00000414700 ATP6V1G2O95670 118 aa15.77■□□□□ 0.11
SHMT2-202ENST00000414700 ADH1CP00326 375 aa15.77■□□□□ 0.11
SHMT2-202ENST00000414700 ITIH2P19823 946 aa15.77■□□□□ 0.11
SHMT2-202ENST00000414700 CTSOP43234 321 aaPredicted RBP15.77■□□□□ 0.11
SHMT2-202ENST00000414700 SLC6A11P48066 632 aa15.77■□□□□ 0.11
SHMT2-202ENST00000414700 OLIG2Q13516 323 aa15.77■□□□□ 0.11
SHMT2-202ENST00000414700 CUL1Q13616 776 aa15.77■□□□□ 0.11
SHMT2-202ENST00000414700 LBRQ14739 615 aaKnown RBP15.77■□□□□ 0.11
SHMT2-202ENST00000414700 QPCTQ16769 361 aa15.77■□□□□ 0.11
SHMT2-202ENST00000414700 GEN1Q17RS7 908 aa15.77■□□□□ 0.11
SHMT2-202ENST00000414700 HIBCHQ6NVY1 386 aaPredicted RBP15.77■□□□□ 0.11
SHMT2-202ENST00000414700 ETFBKMTQ8IXQ9 262 aa15.77■□□□□ 0.11
SHMT2-202ENST00000414700 YAF2Q8IY57 180 aa15.77■□□□□ 0.11
SHMT2-202ENST00000414700 DCAF4L2Q8NA75 395 aa15.77■□□□□ 0.11
SHMT2-202ENST00000414700 RPL10LQ96L21 214 aaKnown RBP15.77■□□□□ 0.11
SHMT2-202ENST00000414700 NT5MQ9NPB1 228 aa15.77■□□□□ 0.11
SHMT2-202ENST00000414700 PRDM6Q9NQX0 595 aa15.77■□□□□ 0.11
SHMT2-202ENST00000414700 DNAJC17Q9NVM6 304 aaKnown RBP15.77■□□□□ 0.11
SHMT2-202ENST00000414700 BCCIPQ9P287 314 aaKnown RBP eCLIP15.77■□□□□ 0.11
SHMT2-202ENST00000414700 ANAPC5Q9UJX4 755 aa15.77■□□□□ 0.11
SHMT2-202ENST00000414700 KIAA1549LQ6ZVL6 1849 aa15.76■□□□□ 0.11
SHMT2-202ENST00000414700 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.76■□□□□ 0.11
SHMT2-202ENST00000414700 TULP3O75386 442 aa15.76■□□□□ 0.11
SHMT2-202ENST00000414700 APRTP07741 180 aa15.76■□□□□ 0.11
SHMT2-202ENST00000414700 MMP13P45452 471 aa15.76■□□□□ 0.11
SHMT2-202ENST00000414700 RENBPP51606 427 aa15.76■□□□□ 0.11
SHMT2-202ENST00000414700 RUNX3Q13761 415 aa15.76■□□□□ 0.11
SHMT2-202ENST00000414700 IHHQ14623 411 aa15.76■□□□□ 0.11
SHMT2-202ENST00000414700 KCNJ11Q14654 390 aa15.76■□□□□ 0.11
SHMT2-202ENST00000414700 PDGFRLQ15198 375 aa15.76■□□□□ 0.11
SHMT2-202ENST00000414700 AAK1Q2M2I8 961 aa15.76■□□□□ 0.11
SHMT2-202ENST00000414700 PITRM1Q5JRX3 1037 aa15.76■□□□□ 0.11
SHMT2-202ENST00000414700 MTSS1LQ765P7 747 aa15.76■□□□□ 0.11
SHMT2-202ENST00000414700 SFTPA1Q8IWL2 248 aa15.76■□□□□ 0.11
SHMT2-202ENST00000414700 TEX26Q8N6G2 289 aa15.76■□□□□ 0.11
SHMT2-202ENST00000414700 NAT8LQ8N9F0 302 aa15.76■□□□□ 0.11
SHMT2-202ENST00000414700 SPATA22Q8NHS9 363 aa15.76■□□□□ 0.11
SHMT2-202ENST00000414700 PRCCQ92733 491 aaPredicted RBP15.76■□□□□ 0.11
SHMT2-202ENST00000414700 FATE1Q969F0 183 aa15.76■□□□□ 0.11
SHMT2-202ENST00000414700 LRRC45Q96CN5 670 aa15.76■□□□□ 0.11
SHMT2-202ENST00000414700 EXOC2Q96KP1 924 aa15.76■□□□□ 0.11
SHMT2-202ENST00000414700 VAT1Q99536 393 aa15.76■□□□□ 0.11
SHMT2-202ENST00000414700 TRMT61BQ9BVS5 477 aaKnown RBP15.76■□□□□ 0.11
SHMT2-202ENST00000414700 FBXO10Q9UK96 956 aa15.76■□□□□ 0.11
SHMT2-202ENST00000414700 ATG2BQ96BY7 2078 aa15.76■□□□□ 0.11
SHMT2-202ENST00000414700 MT-CYBP00156 380 aaPredicted RBP15.75■□□□□ 0.11
SHMT2-202ENST00000414700 CISD3P0C7P0 127 aa15.75■□□□□ 0.11
SHMT2-202ENST00000414700 PABPC1P11940 636 aaKnown RBP15.75■□□□□ 0.11
SHMT2-202ENST00000414700 STK19P49842 368 aaPredicted RBP15.75■□□□□ 0.11
SHMT2-202ENST00000414700 ELF3P78545 371 aaPredicted RBP15.75■□□□□ 0.11
SHMT2-202ENST00000414700 TMCO4Q5TGY1 634 aa15.75■□□□□ 0.11
SHMT2-202ENST00000414700 AGBL2Q5U5Z8 902 aa15.75■□□□□ 0.11
SHMT2-202ENST00000414700 ADIPOR2Q86V24 386 aa15.75■□□□□ 0.11
SHMT2-202ENST00000414700 PDCD7Q8N8D1 485 aaKnown RBP15.75■□□□□ 0.11
SHMT2-202ENST00000414700 CCT6BQ92526 530 aa15.75■□□□□ 0.11
SHMT2-202ENST00000414700 OXNAD1Q96HP4 312 aaPredicted RBP15.75■□□□□ 0.11
SHMT2-202ENST00000414700 GBA3Q9H227 469 aa15.75■□□□□ 0.11
SHMT2-202ENST00000414700 NOD2Q9HC29 1040 aa15.75■□□□□ 0.11
SHMT2-202ENST00000414700 IGSF9Q9P2J2 1179 aa15.75■□□□□ 0.11
SHMT2-202ENST00000414700 UBA2Q9UBT2 640 aaPredicted RBP15.75■□□□□ 0.11
SHMT2-202ENST00000414700 LIMD1Q9UGP4 676 aa15.75■□□□□ 0.11
SHMT2-202ENST00000414700 TRHDEQ9UKU6 1024 aa15.75■□□□□ 0.11
SHMT2-202ENST00000414700 ANKRD36A6QL64 1941 aa15.75■□□□□ 0.11
SHMT2-202ENST00000414700 CHADO15335 359 aa15.75■□□□□ 0.11
SHMT2-202ENST00000414700 GJA4P35212 333 aa15.75■□□□□ 0.11
SHMT2-202ENST00000414700 GRIA1P42261 906 aa15.75■□□□□ 0.11
SHMT2-202ENST00000414700 RGRP47804 291 aa15.75■□□□□ 0.11
SHMT2-202ENST00000414700 DGKGP49619 791 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms