RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 CCDC105Q8IYK2 499 aa5.09□□□□□ -1.59
VPS41-205ENST00000414632 SIX6OS1Q8N1H7 587 aa5.09□□□□□ -1.59
VPS41-205ENST00000414632 TMEM151AQ8N4L1 468 aa5.09□□□□□ -1.59
VPS41-205ENST00000414632 ANKRD52Q8NB46 1076 aa5.09□□□□□ -1.59
VPS41-205ENST00000414632 PDZD8Q8NEN9 1154 aa5.09□□□□□ -1.59
VPS41-205ENST00000414632 PRSS33Q8NF86 280 aa5.09□□□□□ -1.59
VPS41-205ENST00000414632 SVIPQ8NHG7 77 aa5.09□□□□□ -1.59
VPS41-205ENST00000414632 UHMK1Q8TAS1 419 aaKnown RBP5.09□□□□□ -1.59
VPS41-205ENST00000414632 SHC3Q92529 594 aa5.09□□□□□ -1.59
VPS41-205ENST00000414632 JADE3Q92613 823 aa5.09□□□□□ -1.59
VPS41-205ENST00000414632 DNASE1L2Q92874 299 aa5.09□□□□□ -1.59
VPS41-205ENST00000414632 E2F7Q96AV8 911 aa5.09□□□□□ -1.59
VPS41-205ENST00000414632 TEKT5Q96M29 485 aa5.09□□□□□ -1.59
VPS41-205ENST00000414632 FUCA2Q9BTY2 467 aa5.09□□□□□ -1.59
VPS41-205ENST00000414632 NAT10Q9H0A0 1025 aaKnown RBP5.09□□□□□ -1.59
VPS41-205ENST00000414632 ZNF700Q9H0M5 742 aa5.09□□□□□ -1.59
VPS41-205ENST00000414632 LINC00597Q9H2U6 94 aa5.09□□□□□ -1.59
VPS41-205ENST00000414632 FBXO44Q9H4M3 255 aa5.09□□□□□ -1.59
VPS41-205ENST00000414632 KIF9Q9HAQ2 790 aa5.09□□□□□ -1.59
VPS41-205ENST00000414632 LRRC4Q9HBW1 653 aa5.09□□□□□ -1.59
VPS41-205ENST00000414632 LTB4R2Q9NPC1 389 aa5.09□□□□□ -1.59
VPS41-205ENST00000414632 NLRC4Q9NPP4 1024 aa5.09□□□□□ -1.59
VPS41-205ENST00000414632 TLR8Q9NR97 1041 aaKnown RBP5.09□□□□□ -1.59
VPS41-205ENST00000414632 FAM207AQ9NSI2 230 aaPredicted RBP5.09□□□□□ -1.59
VPS41-205ENST00000414632 RBM12Q9NTZ6 932 aaKnown RBP5.09□□□□□ -1.59
VPS41-205ENST00000414632 CCM2LQ9NUG4 571 aaPredicted RBP5.09□□□□□ -1.59
VPS41-205ENST00000414632 DUS2Q9NX74 493 aaKnown RBP5.09□□□□□ -1.59
VPS41-205ENST00000414632 IL37Q9NZH6 218 aa5.09□□□□□ -1.59
VPS41-205ENST00000414632 EHD2Q9NZN4 543 aa5.09□□□□□ -1.59
VPS41-205ENST00000414632 FBLN5Q9UBX5 448 aa5.09□□□□□ -1.59
VPS41-205ENST00000414632 LIMA1Q9UHB6 759 aaKnown RBP5.09□□□□□ -1.59
VPS41-205ENST00000414632 CYTH4Q9UIA0 394 aa5.09□□□□□ -1.59
VPS41-205ENST00000414632 RASAL2Q9UJF2 1139 aa5.09□□□□□ -1.59
VPS41-205ENST00000414632 SCML2Q9UQR0 700 aa5.09□□□□□ -1.59
VPS41-205ENST00000414632 MUC6Q6W4X9 2439 aa5.09□□□□□ -1.59
VPS41-205ENST00000414632 NYNRINQ9P2P1 1898 aaKnown RBP5.09□□□□□ -1.6
VPS41-205ENST00000414632 FANCMQ8IYD8 2048 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 KANSL1LA0AUZ9 987 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 FAM92AA1XBS5 289 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 ANTXRLA6NF34 631 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 FAM90A27PA6NNH2 459 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 YJEFN3A6XGL0 299 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 E7ENQ6 273 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 SPECC1L-ADORA2AF8WAN1 911 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 H0Y858 1186 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 TEX33O43247 280 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 MSI1O43347 362 aaKnown RBP5.08□□□□□ -1.6
VPS41-205ENST00000414632 GFPT2O94808 682 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 ZRANB2O95218 330 aaKnown RBP eCLIP5.08□□□□□ -1.6
VPS41-205ENST00000414632 OLFM2O95897 454 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 ZBED1O96006 694 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 NTRK1P04629 796 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 TPM2P07951 284 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 TMEM253P0C7T8 217 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 ZDHHC11BP0C7U3 371 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 SETSIPP0DME0 302 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 UCHL3P15374 230 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 ZNF18P17022 549 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 TACR1P25103 407 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 HOXC13P31276 330 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 GJA4P35212 333 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 KIR2DL1P43626 348 aaPredicted RBP5.08□□□□□ -1.6
VPS41-205ENST00000414632 KIR2DL2P43627 348 aaPredicted RBP5.08□□□□□ -1.6
VPS41-205ENST00000414632 PPP3CCP48454 512 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 CORO7P57737 925 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 STARD6P59095 220 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 DAOAP59103 153 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 POLR2FP61218 127 aaKnown RBP5.08□□□□□ -1.6
VPS41-205ENST00000414632 YWHAGP61981 247 aaKnown RBP eCLIP5.08□□□□□ -1.6
VPS41-205ENST00000414632 SLC7A9P82251 487 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 PRKCQQ04759 706 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 KDSRQ06136 332 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 IKZF1Q13422 519 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 RUNX3Q13761 415 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 ZNF268Q14587 947 aaPredicted RBP5.08□□□□□ -1.6
VPS41-205ENST00000414632 GRM3Q14832 879 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 IQCB1Q15051 598 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 SLC14A2Q15849 920 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 CNGA2Q16280 664 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 ITPRIPL2Q3MIP1 535 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 C2CD6Q53TS8 623 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 RAB41Q5JT25 222 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 FKBP15Q5T1M5 1219 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 BTBD8Q5XKL5 378 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 STEAP3Q658P3 488 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 CEP128Q6ZU80 1094 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 RSRC2Q7L4I2 434 aaKnown RBP5.08□□□□□ -1.6
VPS41-205ENST00000414632 ENOSF1Q7L5Y1 443 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 BHLHA9Q7RTU4 235 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 APTXQ7Z2E3 356 aaKnown RBP5.08□□□□□ -1.6
VPS41-205ENST00000414632 CCDC186Q7Z3E2 898 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 BMP8AQ7Z5Y6 402 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 ZDHHC13Q8IUH4 622 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 BBS7Q8IWZ6 715 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 C1orf131Q8NDD1 294 aaKnown RBP5.08□□□□□ -1.6
VPS41-205ENST00000414632 ANKRD20A12PQ8NF67 263 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 PJA1Q8NG27 643 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 SLC20A1Q8WUM9 679 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 SLC35F5Q8WV83 523 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 OSCP1Q8WVF1 389 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms