RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 PBXIP1Q96AQ6 731 aa17.84■□□□□ 0.45
SDCBP-202ENST00000413219 APBA2Q99767 749 aa17.84■□□□□ 0.45
SDCBP-202ENST00000413219 TMEM79Q9BSE2 394 aa17.84■□□□□ 0.45
SDCBP-202ENST00000413219 SNX25Q9H3E2 840 aa17.84■□□□□ 0.45
SDCBP-202ENST00000413219 VPS45Q9NRW7 570 aa17.84■□□□□ 0.45
SDCBP-202ENST00000413219 CACNA2D2Q9NY47 1150 aa17.84■□□□□ 0.45
SDCBP-202ENST00000413219 CD300AQ9UGN4 299 aa17.84■□□□□ 0.45
SDCBP-202ENST00000413219 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.84■□□□□ 0.45
SDCBP-202ENST00000413219 A0A1B0GTW7 788 aa17.84■□□□□ 0.45
SDCBP-202ENST00000413219 TRIM64CA6NLI5 447 aa17.84■□□□□ 0.45
SDCBP-202ENST00000413219 NFKB1P19838 968 aa17.84■□□□□ 0.45
SDCBP-202ENST00000413219 COG7P83436 770 aa17.84■□□□□ 0.45
SDCBP-202ENST00000413219 PRPSAP1Q14558 356 aa17.84■□□□□ 0.45
SDCBP-202ENST00000413219 DGKDQ16760 1214 aa17.84■□□□□ 0.45
SDCBP-202ENST00000413219 TSTD2Q5T7W7 516 aa17.84■□□□□ 0.45
SDCBP-202ENST00000413219 SLC41A1Q8IVJ1 513 aa17.84■□□□□ 0.45
SDCBP-202ENST00000413219 CCNYL1Q8N7R7 359 aa17.84■□□□□ 0.45
SDCBP-202ENST00000413219 ANKFN1Q8N957 763 aa17.84■□□□□ 0.45
SDCBP-202ENST00000413219 SLCO4A1Q96BD0 722 aa17.84■□□□□ 0.45
SDCBP-202ENST00000413219 MRPL57Q9BQC6 102 aaKnown RBP17.84■□□□□ 0.45
SDCBP-202ENST00000413219 CXCL16Q9H2A7 254 aa17.84■□□□□ 0.45
SDCBP-202ENST00000413219 CLK4Q9HAZ1 481 aaKnown RBP17.84■□□□□ 0.45
SDCBP-202ENST00000413219 SPAG4Q9NPE6 437 aa17.84■□□□□ 0.45
SDCBP-202ENST00000413219 GDAP2Q9NXN4 497 aa17.84■□□□□ 0.45
SDCBP-202ENST00000413219 ZNHIT2Q9UHR6 403 aa17.84■□□□□ 0.45
SDCBP-202ENST00000413219 DNAJC25-GNG10A0A024R161 153 aa17.83■□□□□ 0.45
SDCBP-202ENST00000413219 UNCXA6NJT0 531 aa17.83■□□□□ 0.45
SDCBP-202ENST00000413219 ZNF701M0R085 212 aaPredicted RBP17.83■□□□□ 0.45
SDCBP-202ENST00000413219 AHSGP02765 367 aa17.83■□□□□ 0.45
SDCBP-202ENST00000413219 LGALS2P05162 132 aa17.83■□□□□ 0.45
SDCBP-202ENST00000413219 PGK2P07205 417 aa17.83■□□□□ 0.45
SDCBP-202ENST00000413219 LMO2P25791 158 aa17.83■□□□□ 0.45
SDCBP-202ENST00000413219 GALK1P51570 392 aa17.83■□□□□ 0.45
SDCBP-202ENST00000413219 NUP107P57740 925 aa17.83■□□□□ 0.45
SDCBP-202ENST00000413219 TPI1P60174 286 aa17.83■□□□□ 0.45
SDCBP-202ENST00000413219 GALNT2Q10471 571 aa17.83■□□□□ 0.45
SDCBP-202ENST00000413219 KCTD21Q4G0X4 260 aa17.83■□□□□ 0.45
SDCBP-202ENST00000413219 FBXO47Q5MNV8 452 aa17.83■□□□□ 0.45
SDCBP-202ENST00000413219 REP15Q6BDI9 236 aa17.83■□□□□ 0.45
SDCBP-202ENST00000413219 PPP4R4Q6NUP7 873 aa17.83■□□□□ 0.45
SDCBP-202ENST00000413219 HERC6Q8IVU3 1022 aa17.83■□□□□ 0.45
SDCBP-202ENST00000413219 PCDH20Q8N6Y1 951 aaKnown RBP17.83■□□□□ 0.45
SDCBP-202ENST00000413219 KCTD13Q8WZ19 329 aa17.83■□□□□ 0.45
SDCBP-202ENST00000413219 TNIP3Q96KP6 325 aa17.83■□□□□ 0.45
SDCBP-202ENST00000413219 TEKT5Q96M29 485 aa17.83■□□□□ 0.45
SDCBP-202ENST00000413219 SEMA6AQ9H2E6 1030 aa17.83■□□□□ 0.45
SDCBP-202ENST00000413219 CAAP1Q9H8G2 361 aa17.83■□□□□ 0.45
SDCBP-202ENST00000413219 PIGVQ9NUD9 493 aa17.83■□□□□ 0.45
SDCBP-202ENST00000413219 TBCCD1Q9NVR7 557 aa17.83■□□□□ 0.45
SDCBP-202ENST00000413219 SNTG2Q9NY99 539 aa17.83■□□□□ 0.45
SDCBP-202ENST00000413219 PPP2R3BQ9Y5P8 575 aa17.83■□□□□ 0.45
SDCBP-202ENST00000413219 hCG_2014768A0A024R1R8 64 aa17.83■□□□□ 0.44
SDCBP-202ENST00000413219 SYNJ2BP-COX16A0A087WUM0 186 aa17.83■□□□□ 0.44
SDCBP-202ENST00000413219 ZSCAN9O15535 394 aaPredicted RBP17.83■□□□□ 0.44
SDCBP-202ENST00000413219 HTRA2O43464 458 aaPredicted RBP17.83■□□□□ 0.44
SDCBP-202ENST00000413219 PGK1P00558 417 aa17.83■□□□□ 0.44
SDCBP-202ENST00000413219 STMN1P16949 149 aa17.83■□□□□ 0.44
SDCBP-202ENST00000413219 SAT1P21673 171 aa17.83■□□□□ 0.44
SDCBP-202ENST00000413219 ATP5F1P24539 256 aaPredicted RBP17.83■□□□□ 0.44
SDCBP-202ENST00000413219 GABRB3P28472 473 aa17.83■□□□□ 0.44
SDCBP-202ENST00000413219 ZNF135P52742 658 aaPredicted RBP17.83■□□□□ 0.44
SDCBP-202ENST00000413219 ZBTB17Q13105 803 aa17.83■□□□□ 0.44
SDCBP-202ENST00000413219 SAMD4BQ5PRF9 694 aaKnown RBP17.83■□□□□ 0.44
SDCBP-202ENST00000413219 FAM45BPQ6NSW5 357 aa17.83■□□□□ 0.44
SDCBP-202ENST00000413219 LIMS2Q7Z4I7 341 aa17.83■□□□□ 0.44
SDCBP-202ENST00000413219 PACRGLQ8N7B6 248 aa17.83■□□□□ 0.44
SDCBP-202ENST00000413219 FNDC8Q8TC99 324 aa17.83■□□□□ 0.44
SDCBP-202ENST00000413219 FAM45AQ8TCE6 357 aa17.83■□□□□ 0.44
SDCBP-202ENST00000413219 SPPL2BQ8TCT7 592 aa17.83■□□□□ 0.44
SDCBP-202ENST00000413219 C18orf25Q96B23 403 aaPredicted RBP17.83■□□□□ 0.44
SDCBP-202ENST00000413219 NXNL1Q96CM4 212 aa17.83■□□□□ 0.44
SDCBP-202ENST00000413219 HNRNPABQ99729 332 aaKnown RBP17.83■□□□□ 0.44
SDCBP-202ENST00000413219 DUSP16Q9BY84 665 aa17.83■□□□□ 0.44
SDCBP-202ENST00000413219 PCDHAC1Q9H158 963 aa17.83■□□□□ 0.44
SDCBP-202ENST00000413219 MEAF6Q9HAF1 191 aa17.83■□□□□ 0.44
SDCBP-202ENST00000413219 RHBDL2Q9NX52 303 aa17.83■□□□□ 0.44
SDCBP-202ENST00000413219 COX16Q9P0S2 106 aa17.83■□□□□ 0.44
SDCBP-202ENST00000413219 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.83■□□□□ 0.44
SDCBP-202ENST00000413219 PTBP2Q9UKA9 531 aaKnown RBP17.83■□□□□ 0.44
SDCBP-202ENST00000413219 UBQLN1Q9UMX0 589 aaKnown RBP17.83■□□□□ 0.44
SDCBP-202ENST00000413219 SNX13Q9Y5W8 968 aa17.83■□□□□ 0.44
SDCBP-202ENST00000413219 A0A087X1B8 175 aa17.82■□□□□ 0.44
SDCBP-202ENST00000413219 TMEM233B4DJY2 109 aa17.82■□□□□ 0.44
SDCBP-202ENST00000413219 FAM72CH0Y354 149 aa17.82■□□□□ 0.44
SDCBP-202ENST00000413219 PSMD12O00232 456 aaPredicted RBP17.82■□□□□ 0.44
SDCBP-202ENST00000413219 CNMDO75829 334 aa17.82■□□□□ 0.44
SDCBP-202ENST00000413219 BMP2P12643 396 aa17.82■□□□□ 0.44
SDCBP-202ENST00000413219 TPH1P17752 444 aa17.82■□□□□ 0.44
SDCBP-202ENST00000413219 AVPR1AP37288 418 aa17.82■□□□□ 0.44
SDCBP-202ENST00000413219 NME3Q13232 169 aa17.82■□□□□ 0.44
SDCBP-202ENST00000413219 MTX3Q5HYI7 312 aa17.82■□□□□ 0.44
SDCBP-202ENST00000413219 FAM72AQ5TYM5 149 aa17.82■□□□□ 0.44
SDCBP-202ENST00000413219 FAM72DQ6L9T8 149 aa17.82■□□□□ 0.44
SDCBP-202ENST00000413219 FAM72BQ86X60 149 aa17.82■□□□□ 0.44
SDCBP-202ENST00000413219 BBS5Q8N3I7 341 aa17.82■□□□□ 0.44
SDCBP-202ENST00000413219 FIBCD1Q8N539 461 aa17.82■□□□□ 0.44
SDCBP-202ENST00000413219 HMGCLL1Q8TB92 370 aa17.82■□□□□ 0.44
SDCBP-202ENST00000413219 NDRG1Q92597 394 aaKnown RBP17.82■□□□□ 0.44
SDCBP-202ENST00000413219 TMIGD2Q96BF3 282 aa17.82■□□□□ 0.44
SDCBP-202ENST00000413219 ZNF512Q96ME7 567 aaPredicted RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms