RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 IGHV4OR15-8A0A075B7B6 117 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 MBD3L5A6NJ08 208 aaPredicted RBP1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 EYA2O00167 538 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 P2RY10O00398 339 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 CHL1O00533 1208 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 SYN3O14994 580 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 SLC25A17O43808 307 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 CRLF1O75462 422 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 SLC22A3O75751 556 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 VNN2O95498 520 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 CH25HO95992 272 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 DAOP14920 347 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 KCNA5P22460 613 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 GSTM2P28161 218 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 VEGFCP49767 419 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 CLCNKBP51801 687 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 ADORA2A-AS1P86434 159 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 PDCLQ13371 301 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 ALKBH1Q13686 389 aaKnown RBP1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 DCTN1Q14203 1278 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 LPIN1Q14693 890 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 LONRF1Q17RB8 773 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 ZACNQ401N2 412 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 TRIM60Q495X7 471 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 IZUMO3Q5VZ72 239 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 PMS2CLQ68D20 193 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 FOXL2NBQ6ZUU3 175 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 RRAGAQ7L523 313 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 DSG4Q86SJ6 1040 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 SLC9B2Q86UD5 537 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 EXOC3L1Q86VI1 746 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 FMNL3Q8IVF7 1028 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 SCAIQ8N9R8 606 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 OR4N2Q8NGD1 307 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 ARRDC2Q8TBH0 407 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 TMEM163Q8TC26 289 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 WDR60Q8WVS4 1066 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 USP13Q92995 863 aaPredicted RBP1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 MUL1Q969V5 352 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 ALG14Q96F25 216 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 SARGQ9BW04 601 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 STK33Q9BYT3 514 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 CSTL1Q9H114 145 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 UBTD1Q9HAC8 227 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 FBRSL1Q9HCM7 1045 aaKnown RBP1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 CDC23Q9UJX2 597 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 KCND3Q9UK17 655 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 SNX9Q9Y5X1 595 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 PSAT1Q9Y617 370 aa1.55□□□□□ -2.16
RNU2-55P-201ENST00000411146 C17orf102A2RUQ5 167 aa1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 FAM90A20PA6NIJ5 464 aa1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 FAM157AC9JC47 383 aa1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 RNMTO43148 476 aaKnown RBP1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 RASA4O43374 803 aa1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 EXTL3O43909 919 aa1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 BAG4O95429 457 aaKnown RBP1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 CBX6O95503 412 aa1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 LINC00271P0C7V0 271 aa1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 MYZAPP0CAP1 466 aa1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 IGHV4-30-4P0DP06 118 aa1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 CHN1P15882 459 aa1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 GM2AP17900 193 aa1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 HOXC13P31276 330 aa1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 RPL3P39023 403 aaKnown RBP1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 MTNR1AP48039 350 aa1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 SLC20A2Q08357 652 aa1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 ZNF155Q12901 538 aaPredicted RBP1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 IFIT5Q13325 482 aaKnown RBP1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 SAFBQ15424 915 aaKnown RBP eCLIP1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 AP5B1Q2VPB7 878 aa1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 SH2D4BQ5SQS7 431 aa1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 TMEM268Q5VZI3 342 aa1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 NAPEPLDQ6IQ20 393 aa1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 UNQ6126/PRO20091Q6UXV3 157 aa1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 GDPD4Q6W3E5 623 aa1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 ZNF497Q6ZNH5 498 aa1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 MON1AQ86VX9 555 aa1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 BRSK2Q8IWQ3 736 aa1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 ZDHHC23Q8IYP9 409 aa1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 NRSN1Q8IZ57 195 aa1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 AADATQ8N5Z0 425 aa1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 OR2C3Q8N628 320 aa1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 OR13A1Q8NGR1 328 aa1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 SECTM1Q8WVN6 248 aa1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 RND1Q92730 232 aa1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 TTC17Q96AE7 1141 aa1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 ANKRD9Q96BM1 317 aaPredicted RBP1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 UHRF2Q96PU4 802 aa1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 CADM1Q9BY67 442 aaKnown RBP1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 CERS4Q9HA82 394 aa1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 OBP2BQ9NPH6 170 aa1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 TM7SF3Q9NS93 570 aa1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 LIN7CQ9NUP9 197 aaKnown RBP1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 OR6C3Q9NZP0 311 aa1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 CEP83Q9Y592 693 aa1.54□□□□□ -2.16
RNU2-55P-201ENST00000411146 IGKV3D-20A0A0C4DH25 116 aa1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 A0A0G2JPF8 293 aa1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 CPED1A4D0V7 1026 aa1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 LGALS16A8MUM7 142 aa1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 HNRNPCL3B7ZW38 293 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms