RNA–Protein interactions for RNA: ENST00000411092.1

RNU6-55P-201, Transcript of RNA, U6 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU6-55P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-55P-201ENST00000411092 USP17L6PQ6QN14 398 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 B3GNT9Q6UX72 402 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 FRMD7Q6ZUT3 714 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 DOK3Q7L591 496 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 PCGF5Q86SE9 256 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 NOP9Q86U38 636 aaKnown RBP3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 TRABD2AQ86V40 505 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 CCDC25Q86WR0 208 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 CHSY1Q86X52 802 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 ERICH1Q86X53 443 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 ECHDC2Q86YB7 292 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 LYSMD2Q8IV50 215 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 GLB1L2Q8IW92 636 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 RHOT1Q8IXI2 618 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 SRRM1Q8IYB3 904 aaKnown RBP3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 ARHGAP18Q8N392 663 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 PPFIBP2Q8ND30 876 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 FBXL13Q8NEE6 735 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 RDM1Q8NG50 284 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 EXD1Q8NHP7 514 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 LRRC8CQ8TDW0 803 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 DENND1AQ8TEH3 1009 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 DNAJC9Q8WXX5 260 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 KRT35Q92764 455 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 ERP27Q96DN0 273 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 THOC1Q96FV9 657 aaKnown RBP3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 BICD1Q96G01 975 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 RBM41Q96IZ5 413 aaKnown RBP3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 NT5C1BQ96P26 610 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 NR1H4Q96RI1 486 aaPredicted RBP3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 NUDCD1Q96RS6 583 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 SMC6Q96SB8 1091 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 SIKE1Q9BRV8 207 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 TEKT3Q9BXF9 490 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 IDI2Q9BXS1 227 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 DCLK3Q9C098 648 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 KCNH6Q9H252 994 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 PRDM12Q9H4Q4 367 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 C17orf75Q9HAS0 396 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 KIAA1586Q9HCI6 787 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 MRPL47Q9HD33 250 aaKnown RBP3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 EMC7Q9NPA0 242 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 KCNK9Q9NPC2 374 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 UBE2TQ9NPD8 197 aaPredicted RBP3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 MAP3K20Q9NYL2 800 aaKnown RBP3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 TAS2R14Q9NYV8 317 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 NINJ2Q9NZG7 142 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 TRPM5Q9NZQ8 1165 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 CPSF2Q9P2I0 782 aaKnown RBP3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 PDP2Q9P2J9 529 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 ANKFY1Q9P2R3 1169 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 PSMC3IPQ9P2W1 217 aaPredicted RBP3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 PI4KBQ9UBF8 816 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 SCOCQ9UIL1 159 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 DRG1Q9Y295 367 aaKnown RBP3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 SSX2IPQ9Y2D8 614 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 MRPL11Q9Y3B7 192 aaKnown RBP3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 NEU2Q9Y3R4 380 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 PCDHB2Q9Y5E7 798 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 MRPL42Q9Y6G3 142 aaKnown RBP3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 ARID2Q68CP9 1835 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 ZNF335Q9H4Z2 1342 aaPredicted RBP3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 NRXN2Q9P2S2 1712 aa3.67□□□□□ -1.82
RNU6-55P-201ENST00000411092 ZNF646O15015 1829 aaPredicted RBP3.66□□□□□ -1.82
RNU6-55P-201ENST00000411092 SIP14410 1827 aa3.66□□□□□ -1.82
RNU6-55P-201ENST00000411092 PSME4Q14997 1843 aa3.66□□□□□ -1.82
RNU6-55P-201ENST00000411092 CENPVL1A0A0U1RR11 272 aa3.66□□□□□ -1.82
RNU6-55P-201ENST00000411092 F5H6K3 240 aa3.66□□□□□ -1.82
RNU6-55P-201ENST00000411092 F8W8V4 182 aa3.66□□□□□ -1.82
RNU6-55P-201ENST00000411092 PDLIM1O00151 329 aa3.66□□□□□ -1.82
RNU6-55P-201ENST00000411092 LEFTY2O00292 366 aa3.66□□□□□ -1.82
RNU6-55P-201ENST00000411092 MPHOSPH10O00566 681 aaKnown RBP3.66□□□□□ -1.82
RNU6-55P-201ENST00000411092 KLF11O14901 512 aa3.66□□□□□ -1.82
RNU6-55P-201ENST00000411092 NVLO15381 856 aaKnown RBP3.66□□□□□ -1.82
RNU6-55P-201ENST00000411092 CLDN3O15551 220 aa3.66□□□□□ -1.82
RNU6-55P-201ENST00000411092 KDM1AO60341 852 aa3.66□□□□□ -1.82
RNU6-55P-201ENST00000411092 LPXNO60711 386 aa3.66□□□□□ -1.82
RNU6-55P-201ENST00000411092 PRAMEF4O60810 478 aa3.66□□□□□ -1.82
RNU6-55P-201ENST00000411092 EDF1O60869 148 aaKnown RBP3.66□□□□□ -1.82
RNU6-55P-201ENST00000411092 PEX11AO75192 247 aa3.66□□□□□ -1.82
RNU6-55P-201ENST00000411092 CSDE1O75534 798 aaKnown RBP3.66□□□□□ -1.82
RNU6-55P-201ENST00000411092 PROSCO94903 275 aa3.66□□□□□ -1.82
RNU6-55P-201ENST00000411092 SLITRK3O94933 977 aa3.66□□□□□ -1.82
RNU6-55P-201ENST00000411092 TJP3O95049 919 aa3.66□□□□□ -1.82
RNU6-55P-201ENST00000411092 SNUPNO95149 360 aaKnown RBP3.66□□□□□ -1.82
RNU6-55P-201ENST00000411092 LSM8O95777 96 aaKnown RBP3.66□□□□□ -1.82
RNU6-55P-201ENST00000411092 VIL1P09327 827 aaKnown RBP3.66□□□□□ -1.82
RNU6-55P-201ENST00000411092 LTA4HP09960 611 aaKnown RBP3.66□□□□□ -1.82
RNU6-55P-201ENST00000411092 POLR2MP0CAP2 368 aa3.66□□□□□ -1.82
RNU6-55P-201ENST00000411092 TRIM49P0CI25 452 aa3.66□□□□□ -1.82
RNU6-55P-201ENST00000411092 TRIM49CP0CI26 452 aa3.66□□□□□ -1.82
RNU6-55P-201ENST00000411092 DLATP10515 647 aaKnown RBP3.66□□□□□ -1.82
RNU6-55P-201ENST00000411092 UNGP13051 313 aaPredicted RBP3.66□□□□□ -1.82
RNU6-55P-201ENST00000411092 EEF2P13639 858 aaKnown RBP3.66□□□□□ -1.82
RNU6-55P-201ENST00000411092 PECAM1P16284 738 aaPredicted RBP3.66□□□□□ -1.82
RNU6-55P-201ENST00000411092 CHRNB2P17787 502 aa3.66□□□□□ -1.82
RNU6-55P-201ENST00000411092 LAG3P18627 525 aa3.66□□□□□ -1.82
RNU6-55P-201ENST00000411092 KLRC2P26717 231 aa3.66□□□□□ -1.82
RNU6-55P-201ENST00000411092 NMT1P30419 496 aaKnown RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms