RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 MRPL46Q9H2W6 279 aaKnown RBP16.91■□□□□ 0.3
LIMS2-208ENST00000410011 NCKIPSDQ9NZQ3 722 aa16.91■□□□□ 0.3
LIMS2-208ENST00000410011 H0YJX3 145 aa16.9■□□□□ 0.3
LIMS2-208ENST00000410011 NEMP1O14524 444 aa16.9■□□□□ 0.3
LIMS2-208ENST00000410011 USP17L7P0C7H9 530 aa16.9■□□□□ 0.3
LIMS2-208ENST00000410011 SMIM18P0DKX4 95 aa16.9■□□□□ 0.3
LIMS2-208ENST00000410011 ART3Q13508 389 aa16.9■□□□□ 0.3
LIMS2-208ENST00000410011 USP41Q3LFD5 358 aa16.9■□□□□ 0.3
LIMS2-208ENST00000410011 CHSY3Q70JA7 882 aa16.9■□□□□ 0.3
LIMS2-208ENST00000410011 AHI1Q8N157 1196 aa16.9■□□□□ 0.3
LIMS2-208ENST00000410011 TOP1MTQ969P6 601 aa16.9■□□□□ 0.3
LIMS2-208ENST00000410011 PCED1BQ96HM7 432 aa16.9■□□□□ 0.3
LIMS2-208ENST00000410011 FAR2Q96K12 515 aa16.9■□□□□ 0.3
LIMS2-208ENST00000410011 IL12RB2Q99665 862 aa16.9■□□□□ 0.3
LIMS2-208ENST00000410011 TBL1YQ9BQ87 522 aa16.9■□□□□ 0.3
LIMS2-208ENST00000410011 XPR1Q9UBH6 696 aa16.9■□□□□ 0.3
LIMS2-208ENST00000410011 CDH9Q9ULB4 789 aa16.9■□□□□ 0.3
LIMS2-208ENST00000410011 TCAF2A6NFQ2 919 aa16.9■□□□□ 0.3
LIMS2-208ENST00000410011 F7P08709 466 aaPredicted RBP16.9■□□□□ 0.3
LIMS2-208ENST00000410011 MS4A2Q01362 244 aa16.9■□□□□ 0.3
LIMS2-208ENST00000410011 EIF4EBP2Q13542 120 aaPredicted RBP16.9■□□□□ 0.3
LIMS2-208ENST00000410011 DENND5AQ6IQ26 1287 aa16.9■□□□□ 0.3
LIMS2-208ENST00000410011 GPRIN1Q7Z2K8 1008 aa16.9■□□□□ 0.3
LIMS2-208ENST00000410011 PELI3Q8N2H9 469 aa16.9■□□□□ 0.3
LIMS2-208ENST00000410011 LZTR1Q8N653 840 aa16.9■□□□□ 0.3
LIMS2-208ENST00000410011 TSPYL2Q9H2G4 693 aaPredicted RBP16.9■□□□□ 0.3
LIMS2-208ENST00000410011 ZNF696Q9H7X3 374 aa16.9■□□□□ 0.3
LIMS2-208ENST00000410011 COPG1Q9Y678 874 aaKnown RBP16.9■□□□□ 0.3
LIMS2-208ENST00000410011 HAS3O00219 553 aa16.89■□□□□ 0.29
LIMS2-208ENST00000410011 POU4F1Q01851 419 aa16.89■□□□□ 0.29
LIMS2-208ENST00000410011 TSTD2Q5T7W7 516 aa16.89■□□□□ 0.29
LIMS2-208ENST00000410011 GPR142Q7Z601 462 aa16.89■□□□□ 0.29
LIMS2-208ENST00000410011 ALDH16A1Q8IZ83 802 aa16.89■□□□□ 0.29
LIMS2-208ENST00000410011 C2CD4AQ8NCU7 369 aaPredicted RBP16.89■□□□□ 0.29
LIMS2-208ENST00000410011 CCDC126Q96EE4 140 aa16.89■□□□□ 0.29
LIMS2-208ENST00000410011 DTNBP1Q96EV8 351 aa16.89■□□□□ 0.29
LIMS2-208ENST00000410011 SMARCD1Q96GM5 515 aa16.89■□□□□ 0.29
LIMS2-208ENST00000410011 ZFRQ96KR1 1074 aaKnown RBP16.89■□□□□ 0.29
LIMS2-208ENST00000410011 PRICKLE1Q96MT3 831 aaPredicted RBP16.89■□□□□ 0.29
LIMS2-208ENST00000410011 TRIM62Q9BVG3 475 aa16.89■□□□□ 0.29
LIMS2-208ENST00000410011 ENTPD7Q9NQZ7 604 aa16.89■□□□□ 0.29
LIMS2-208ENST00000410011 FAM95CA0A1B0GW59 222 aa16.88■□□□□ 0.29
LIMS2-208ENST00000410011 MYBPHLA2RUH7 354 aa16.88■□□□□ 0.29
LIMS2-208ENST00000410011 GOLGA8TH3BQL2 631 aa16.88■□□□□ 0.29
LIMS2-208ENST00000410011 TXNDC9O14530 226 aa16.88■□□□□ 0.29
LIMS2-208ENST00000410011 PGK1P00558 417 aa16.88■□□□□ 0.29
LIMS2-208ENST00000410011 ATP5F1P24539 256 aaPredicted RBP16.88■□□□□ 0.29
LIMS2-208ENST00000410011 ARNTP27540 789 aa16.88■□□□□ 0.29
LIMS2-208ENST00000410011 HOXC13P31276 330 aa16.88■□□□□ 0.29
LIMS2-208ENST00000410011 ADRA1AP35348 466 aa16.88■□□□□ 0.29
LIMS2-208ENST00000410011 CCR10P46092 362 aa16.88■□□□□ 0.29
LIMS2-208ENST00000410011 MRPS22P82650 360 aaKnown RBP16.88■□□□□ 0.29
LIMS2-208ENST00000410011 GALNT1Q10472 559 aaPredicted RBP16.88■□□□□ 0.29
LIMS2-208ENST00000410011 MFSD10Q14728 455 aa16.88■□□□□ 0.29
LIMS2-208ENST00000410011 KIAA0408Q6ZU52 694 aa16.88■□□□□ 0.29
LIMS2-208ENST00000410011 OTOP3Q7RTS5 596 aa16.88■□□□□ 0.29
LIMS2-208ENST00000410011 SLC41A1Q8IVJ1 513 aa16.88■□□□□ 0.29
LIMS2-208ENST00000410011 PPHLN1Q8NEY8 458 aaKnown RBP16.88■□□□□ 0.29
LIMS2-208ENST00000410011 NLGN2Q8NFZ4 835 aa16.88■□□□□ 0.29
LIMS2-208ENST00000410011 NXNL1Q96CM4 212 aa16.88■□□□□ 0.29
LIMS2-208ENST00000410011 CATSPER2Q96P56 530 aa16.88■□□□□ 0.29
LIMS2-208ENST00000410011 TREX1Q9NSU2 369 aa16.88■□□□□ 0.29
LIMS2-208ENST00000410011 CLIC5Q9NZA1 410 aa16.88■□□□□ 0.29
LIMS2-208ENST00000410011 UBP1Q9NZI7 540 aa16.88■□□□□ 0.29
LIMS2-208ENST00000410011 SARDHQ9UL12 918 aa16.88■□□□□ 0.29
LIMS2-208ENST00000410011 GNEQ9Y223 722 aaKnown RBP16.88■□□□□ 0.29
LIMS2-208ENST00000410011 TCAF1Q9Y4C2 921 aa16.88■□□□□ 0.29
LIMS2-208ENST00000410011 PDHXO00330 501 aa16.88■□□□□ 0.29
LIMS2-208ENST00000410011 SDHDO14521 159 aa16.88■□□□□ 0.29
LIMS2-208ENST00000410011 CRTAMO95727 393 aa16.88■□□□□ 0.29
LIMS2-208ENST00000410011 IGLV3-25P01717 112 aa16.88■□□□□ 0.29
LIMS2-208ENST00000410011 PAMP19021 973 aa16.88■□□□□ 0.29
LIMS2-208ENST00000410011 RGS2P41220 211 aa16.88■□□□□ 0.29
LIMS2-208ENST00000410011 DPP6P42658 865 aa16.88■□□□□ 0.29
LIMS2-208ENST00000410011 GLRBP48167 497 aa16.88■□□□□ 0.29
LIMS2-208ENST00000410011 GEMP55040 296 aa16.88■□□□□ 0.29
LIMS2-208ENST00000410011 PSMD5Q16401 504 aa16.88■□□□□ 0.29
LIMS2-208ENST00000410011 CEP97Q8IW35 865 aa16.88■□□□□ 0.29
LIMS2-208ENST00000410011 BHLHE22Q8NFJ8 381 aaPredicted RBP16.88■□□□□ 0.29
LIMS2-208ENST00000410011 ASB9Q96DX5 294 aa16.88■□□□□ 0.29
LIMS2-208ENST00000410011 GLOD4Q9HC38 313 aa16.88■□□□□ 0.29
LIMS2-208ENST00000410011 TMEM30AQ9NV96 361 aa16.88■□□□□ 0.29
LIMS2-208ENST00000410011 PADI4Q9UM07 663 aa16.88■□□□□ 0.29
LIMS2-208ENST00000410011 NEU3Q9UQ49 428 aa16.88■□□□□ 0.29
LIMS2-208ENST00000410011 TRIM38O00635 465 aa16.87■□□□□ 0.29
LIMS2-208ENST00000410011 MATN3O15232 486 aa16.87■□□□□ 0.29
LIMS2-208ENST00000410011 DYNC1LI2O43237 492 aaPredicted RBP16.87■□□□□ 0.29
LIMS2-208ENST00000410011 TNFAIP8O95379 198 aa16.87■□□□□ 0.29
LIMS2-208ENST00000410011 TFAP2AP05549 437 aa16.87■□□□□ 0.29
LIMS2-208ENST00000410011 PMLP29590 882 aa16.87■□□□□ 0.29
LIMS2-208ENST00000410011 STX5Q13190 355 aa16.87■□□□□ 0.29
LIMS2-208ENST00000410011 MAPRE2Q15555 327 aa16.87■□□□□ 0.29
LIMS2-208ENST00000410011 TMEM198Q66K66 360 aa16.87■□□□□ 0.29
LIMS2-208ENST00000410011 KIAA0930Q6ICG6 404 aaPredicted RBP16.87■□□□□ 0.29
LIMS2-208ENST00000410011 USP50Q70EL3 339 aaPredicted RBP16.87■□□□□ 0.29
LIMS2-208ENST00000410011 MFSD6LQ8IWD5 586 aa16.87■□□□□ 0.29
LIMS2-208ENST00000410011 LILRA2Q8N149 483 aa16.87■□□□□ 0.29
LIMS2-208ENST00000410011 MOCOSQ96EN8 888 aa16.87■□□□□ 0.29
LIMS2-208ENST00000410011 MRPS26Q9BYN8 205 aaKnown RBP16.87■□□□□ 0.29
LIMS2-208ENST00000410011 PRKD2Q9BZL6 878 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms