RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 POLR3BQ9NW08 1133 aaPredicted RBP16.86■□□□□ 0.29
SUMO1-208ENST00000409627 SPATA6Q9NWH7 488 aaPredicted RBP16.86■□□□□ 0.29
SUMO1-208ENST00000409627 HECAQ9UBI9 543 aaPredicted RBP16.86■□□□□ 0.29
SUMO1-208ENST00000409627 CDC23Q9UJX2 597 aa16.86■□□□□ 0.29
SUMO1-208ENST00000409627 TRHDEQ9UKU6 1024 aa16.86■□□□□ 0.29
SUMO1-208ENST00000409627 ZNF148Q9UQR1 794 aa16.86■□□□□ 0.29
SUMO1-208ENST00000409627 MUC3AQ02505 3323 aa16.86■□□□□ 0.29
SUMO1-208ENST00000409627 A0A0C4DFX4 3053 aa16.85■□□□□ 0.29
SUMO1-208ENST00000409627 TCRBV21S2A2A0A5A6 115 aa16.85■□□□□ 0.29
SUMO1-208ENST00000409627 PHF2O75151 1096 aa16.85■□□□□ 0.29
SUMO1-208ENST00000409627 POP4O95707 220 aaKnown RBP16.85■□□□□ 0.29
SUMO1-208ENST00000409627 AVPR2P30518 371 aa16.85■□□□□ 0.29
SUMO1-208ENST00000409627 STIP1P31948 543 aaKnown RBP16.85■□□□□ 0.29
SUMO1-208ENST00000409627 CHRNA3P32297 505 aa16.85■□□□□ 0.29
SUMO1-208ENST00000409627 MAPK8P45983 427 aa16.85■□□□□ 0.29
SUMO1-208ENST00000409627 MAXP61244 160 aa16.85■□□□□ 0.29
SUMO1-208ENST00000409627 AP1S1P61966 158 aa16.85■□□□□ 0.29
SUMO1-208ENST00000409627 SATB1Q01826 763 aa16.85■□□□□ 0.29
SUMO1-208ENST00000409627 RAD51Q06609 339 aa16.85■□□□□ 0.29
SUMO1-208ENST00000409627 GRM3Q14832 879 aa16.85■□□□□ 0.29
SUMO1-208ENST00000409627 MYLK3Q32MK0 819 aa16.85■□□□□ 0.29
SUMO1-208ENST00000409627 DSG4Q86SJ6 1040 aa16.85■□□□□ 0.29
SUMO1-208ENST00000409627 SRLQ86TD4 932 aa16.85■□□□□ 0.29
SUMO1-208ENST00000409627 ZNF567Q8N184 647 aa16.85■□□□□ 0.29
SUMO1-208ENST00000409627 CAMKK1Q8N5S9 505 aa16.85■□□□□ 0.29
SUMO1-208ENST00000409627 DTWD2Q8NBA8 298 aa16.85■□□□□ 0.29
SUMO1-208ENST00000409627 CHST14Q8NCH0 376 aa16.85■□□□□ 0.29
SUMO1-208ENST00000409627 TSTD1Q8NFU3 115 aa16.85■□□□□ 0.29
SUMO1-208ENST00000409627 MAGOHBQ96A72 148 aaKnown RBP16.85■□□□□ 0.29
SUMO1-208ENST00000409627 LRIG1Q96JA1 1093 aa16.85■□□□□ 0.29
SUMO1-208ENST00000409627 SPATA13Q96N96 652 aa16.85■□□□□ 0.29
SUMO1-208ENST00000409627 FAM129BQ96TA1 746 aa16.85■□□□□ 0.29
SUMO1-208ENST00000409627 HEPHQ9BQS7 1158 aa16.85■□□□□ 0.29
SUMO1-208ENST00000409627 CEP41Q9BYV8 373 aa16.85■□□□□ 0.29
SUMO1-208ENST00000409627 RSPH9Q9H1X1 276 aaPredicted RBP16.85■□□□□ 0.29
SUMO1-208ENST00000409627 PRMT8Q9NR22 394 aaPredicted RBP16.85■□□□□ 0.29
SUMO1-208ENST00000409627 KLHL8Q9P2G9 620 aaPredicted RBP16.85■□□□□ 0.29
SUMO1-208ENST00000409627 IL36AQ9UHA7 158 aa16.85■□□□□ 0.29
SUMO1-208ENST00000409627 C5orf60A6NFR6 353 aa16.84■□□□□ 0.29
SUMO1-208ENST00000409627 CCDC188H7C350 402 aa16.84■□□□□ 0.29
SUMO1-208ENST00000409627 RNASEH1O60930 286 aaKnown RBP16.84■□□□□ 0.29
SUMO1-208ENST00000409627 ALDH1A2O94788 518 aa16.84■□□□□ 0.29
SUMO1-208ENST00000409627 PRNPP04156 253 aa16.84■□□□□ 0.29
SUMO1-208ENST00000409627 CTSLP07711 333 aa16.84■□□□□ 0.29
SUMO1-208ENST00000409627 CES1P23141 567 aa16.84■□□□□ 0.29
SUMO1-208ENST00000409627 FNTAP49354 379 aa16.84■□□□□ 0.29
SUMO1-208ENST00000409627 SCNN1BP51168 640 aa16.84■□□□□ 0.29
SUMO1-208ENST00000409627 GDF10P55107 478 aa16.84■□□□□ 0.29
SUMO1-208ENST00000409627 TMEM31Q5JXX7 168 aa16.84■□□□□ 0.29
SUMO1-208ENST00000409627 ZNF776Q68DI1 518 aaPredicted RBP16.84■□□□□ 0.29
SUMO1-208ENST00000409627 RYBPQ8N488 228 aaPredicted RBP16.84■□□□□ 0.29
SUMO1-208ENST00000409627 FAM71DQ8N9W8 422 aa16.84■□□□□ 0.29
SUMO1-208ENST00000409627 TMIEQ8NEW7 156 aa16.84■□□□□ 0.29
SUMO1-208ENST00000409627 OR6K2Q8NGY2 324 aa16.84■□□□□ 0.29
SUMO1-208ENST00000409627 VOPP1Q96AW1 172 aa16.84■□□□□ 0.29
SUMO1-208ENST00000409627 AGAP3Q96P47 875 aa16.84■□□□□ 0.29
SUMO1-208ENST00000409627 HHIPQ96QV1 700 aa16.84■□□□□ 0.29
SUMO1-208ENST00000409627 TUBGCP5Q96RT8 1024 aa16.84■□□□□ 0.29
SUMO1-208ENST00000409627 SEMA3CQ99985 751 aa16.84■□□□□ 0.29
SUMO1-208ENST00000409627 CPEB1Q9BZB8 566 aaKnown RBP16.84■□□□□ 0.29
SUMO1-208ENST00000409627 MKRN2Q9H000 416 aaKnown RBP16.84■□□□□ 0.29
SUMO1-208ENST00000409627 ZDHHC6Q9H6R6 413 aa16.84■□□□□ 0.29
SUMO1-208ENST00000409627 SCUBE2Q9NQ36 999 aa16.84■□□□□ 0.29
SUMO1-208ENST00000409627 EVLQ9UI08 416 aaPredicted RBP16.84■□□□□ 0.29
SUMO1-208ENST00000409627 TTLL3Q9Y4R7 772 aa16.84■□□□□ 0.29
SUMO1-208ENST00000409627 WASF2Q9Y6W5 498 aa16.84■□□□□ 0.29
SUMO1-208ENST00000409627 C1QTNF3-AMACRE9PGA6 284 aa16.83■□□□□ 0.28
SUMO1-208ENST00000409627 K7ESF4 209 aa16.83■□□□□ 0.28
SUMO1-208ENST00000409627 INSIG1O15503 277 aa16.83■□□□□ 0.28
SUMO1-208ENST00000409627 ZBTB24O43167 697 aaPredicted RBP16.83■□□□□ 0.28
SUMO1-208ENST00000409627 LAMTOR5O43504 91 aa16.83■□□□□ 0.28
SUMO1-208ENST00000409627 OPHN1O60890 802 aa16.83■□□□□ 0.28
SUMO1-208ENST00000409627 GCATO75600 419 aa16.83■□□□□ 0.28
SUMO1-208ENST00000409627 APBB3O95704 486 aa16.83■□□□□ 0.28
SUMO1-208ENST00000409627 GABRG2P18507 467 aa16.83■□□□□ 0.28
SUMO1-208ENST00000409627 NDUFV2P19404 249 aa16.83■□□□□ 0.28
SUMO1-208ENST00000409627 CD68P34810 354 aaPredicted RBP16.83■□□□□ 0.28
SUMO1-208ENST00000409627 COILP38432 576 aaPredicted RBP16.83■□□□□ 0.28
SUMO1-208ENST00000409627 NRLP54845 237 aa16.83■□□□□ 0.28
SUMO1-208ENST00000409627 RPS14P62263 151 aaKnown RBP16.83■□□□□ 0.28
SUMO1-208ENST00000409627 DSC2Q02487 901 aa16.83■□□□□ 0.28
SUMO1-208ENST00000409627 LMNB2Q03252 620 aa16.83■□□□□ 0.28
SUMO1-208ENST00000409627 ZBTB16Q05516 673 aa16.83■□□□□ 0.28
SUMO1-208ENST00000409627 CKAP4Q07065 602 aaKnown RBP16.83■□□□□ 0.28
SUMO1-208ENST00000409627 ITKQ08881 620 aa16.83■□□□□ 0.28
SUMO1-208ENST00000409627 WHAMMP3Q1A5X7 153 aa16.83■□□□□ 0.28
SUMO1-208ENST00000409627 P3H1Q32P28 736 aa16.83■□□□□ 0.28
SUMO1-208ENST00000409627 ANKRD20A2Q5SQ80 823 aa16.83■□□□□ 0.28
SUMO1-208ENST00000409627 ANKRD20A1Q5TYW2 823 aa16.83■□□□□ 0.28
SUMO1-208ENST00000409627 ANKRD20A3Q5VUR7 823 aa16.83■□□□□ 0.28
SUMO1-208ENST00000409627 ITPRIPL1Q6GPH6 555 aa16.83■□□□□ 0.28
SUMO1-208ENST00000409627 TTC27Q6P3X3 843 aa16.83■□□□□ 0.28
SUMO1-208ENST00000409627 NCEH1Q6PIU2 408 aa16.83■□□□□ 0.28
SUMO1-208ENST00000409627 CCDC137Q6PK04 289 aaKnown RBP16.83■□□□□ 0.28
SUMO1-208ENST00000409627 PID1Q7Z2X4 250 aa16.83■□□□□ 0.28
SUMO1-208ENST00000409627 ZNF572Q7Z3I7 529 aaPredicted RBP16.83■□□□□ 0.28
SUMO1-208ENST00000409627 RASSF3Q86WH2 238 aa16.83■□□□□ 0.28
SUMO1-208ENST00000409627 TMPRSS6Q8IU80 811 aa16.83■□□□□ 0.28
SUMO1-208ENST00000409627 C1orf210Q8IVY1 113 aa16.83■□□□□ 0.28
SUMO1-208ENST00000409627 ATL2Q8NHH9 583 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms