RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 PIGKQ92643 395 aa21.14■□□□□ 0.97
C4orf48-201ENST00000409248 ISG20Q96AZ6 181 aaKnown RBP21.14■□□□□ 0.97
C4orf48-201ENST00000409248 ZNF419Q96HQ0 510 aaPredicted RBP21.14■□□□□ 0.97
C4orf48-201ENST00000409248 CELF6Q96J87 481 aaKnown RBP21.14■□□□□ 0.97
C4orf48-201ENST00000409248 LRRC19Q9H756 370 aa21.14■□□□□ 0.97
C4orf48-201ENST00000409248 EFR3BQ9Y2G0 817 aa21.14■□□□□ 0.97
C4orf48-201ENST00000409248 MFHAS1Q9Y4C4 1052 aa21.14■□□□□ 0.97
C4orf48-201ENST00000409248 A0A1W2PP55 124 aa21.13■□□□□ 0.97
C4orf48-201ENST00000409248 CST8O60676 142 aa21.13■□□□□ 0.97
C4orf48-201ENST00000409248 PRNPP04156 253 aa21.13■□□□□ 0.97
C4orf48-201ENST00000409248 ATP1A1P05023 1023 aaKnown RBP21.13■□□□□ 0.97
C4orf48-201ENST00000409248 ZNF806P0C7X5 589 aa21.13■□□□□ 0.97
C4orf48-201ENST00000409248 TGM1P22735 817 aa21.13■□□□□ 0.97
C4orf48-201ENST00000409248 DYNLT1P63172 113 aa21.13■□□□□ 0.97
C4orf48-201ENST00000409248 LLGL1Q15334 1064 aa21.13■□□□□ 0.97
C4orf48-201ENST00000409248 SLC41A1Q8IVJ1 513 aa21.13■□□□□ 0.97
C4orf48-201ENST00000409248 DEFB119Q8N690 84 aa21.13■□□□□ 0.97
C4orf48-201ENST00000409248 PIP4K2CQ8TBX8 421 aa21.13■□□□□ 0.97
C4orf48-201ENST00000409248 WDR24Q96S15 920 aa21.13■□□□□ 0.97
C4orf48-201ENST00000409248 NAPGQ99747 312 aaPredicted RBP21.13■□□□□ 0.97
C4orf48-201ENST00000409248 HEMGNQ9BXL5 484 aa21.13■□□□□ 0.97
C4orf48-201ENST00000409248 KLC2Q9H0B6 622 aa21.13■□□□□ 0.97
C4orf48-201ENST00000409248 TNKS2Q9H2K2 1166 aa21.13■□□□□ 0.97
C4orf48-201ENST00000409248 PPM1HQ9ULR3 514 aa21.13■□□□□ 0.97
C4orf48-201ENST00000409248 FCF1Q9Y324 198 aaKnown RBP21.13■□□□□ 0.97
C4orf48-201ENST00000409248 ZNF292O60281 2723 aa21.13■□□□□ 0.97
C4orf48-201ENST00000409248 CTAGE9A4FU28 777 aa21.12■□□□□ 0.97
C4orf48-201ENST00000409248 MFSD11O43934 449 aa21.12■□□□□ 0.97
C4orf48-201ENST00000409248 TJP3O95049 919 aa21.12■□□□□ 0.97
C4orf48-201ENST00000409248 TGM2P21980 687 aa21.12■□□□□ 0.97
C4orf48-201ENST00000409248 ITPKAP23677 461 aa21.12■□□□□ 0.97
C4orf48-201ENST00000409248 CHRNA3P32297 505 aa21.12■□□□□ 0.97
C4orf48-201ENST00000409248 ACSL1P33121 698 aa21.12■□□□□ 0.97
C4orf48-201ENST00000409248 ETF1P62495 437 aaKnown RBP21.12■□□□□ 0.97
C4orf48-201ENST00000409248 CCDC6Q16204 474 aa21.12■□□□□ 0.97
C4orf48-201ENST00000409248 CCDC181Q5TID7 509 aa21.12■□□□□ 0.97
C4orf48-201ENST00000409248 PEAR1Q5VY43 1037 aaPredicted RBP21.12■□□□□ 0.97
C4orf48-201ENST00000409248 AFMIDQ63HM1 303 aa21.12■□□□□ 0.97
C4orf48-201ENST00000409248 AADACL2Q6P093 401 aa21.12■□□□□ 0.97
C4orf48-201ENST00000409248 BBS12Q6ZW61 710 aa21.12■□□□□ 0.97
C4orf48-201ENST00000409248 HDDC3Q8N4P3 179 aa21.12■□□□□ 0.97
C4orf48-201ENST00000409248 AADATQ8N5Z0 425 aa21.12■□□□□ 0.97
C4orf48-201ENST00000409248 PLD5Q8N7P1 536 aa21.12■□□□□ 0.97
C4orf48-201ENST00000409248 SLC39A8Q9C0K1 460 aa21.12■□□□□ 0.97
C4orf48-201ENST00000409248 SUSD2Q9UGT4 822 aa21.12■□□□□ 0.97
C4orf48-201ENST00000409248 IL36AQ9UHA7 158 aa21.12■□□□□ 0.97
C4orf48-201ENST00000409248 ATXN2Q99700 1313 aaKnown RBP21.11■□□□□ 0.97
C4orf48-201ENST00000409248 LRRC72A6NJI9 287 aa21.11■□□□□ 0.97
C4orf48-201ENST00000409248 DFFAO00273 331 aa21.11■□□□□ 0.97
C4orf48-201ENST00000409248 SLC7A4O43246 635 aa21.11■□□□□ 0.97
C4orf48-201ENST00000409248 TMCC1O94876 653 aa21.11■□□□□ 0.97
C4orf48-201ENST00000409248 CD160O95971 181 aa21.11■□□□□ 0.97
C4orf48-201ENST00000409248 GSRP00390 522 aa21.11■□□□□ 0.97
C4orf48-201ENST00000409248 SNRPD1P62314 119 aaKnown RBP21.11■□□□□ 0.97
C4orf48-201ENST00000409248 CCDC15Q0P6D6 951 aa21.11■□□□□ 0.97
C4orf48-201ENST00000409248 INO80DQ53TQ3 878 aaPredicted RBP21.11■□□□□ 0.97
C4orf48-201ENST00000409248 CARD16Q5EG05 197 aa21.11■□□□□ 0.97
C4orf48-201ENST00000409248 DPY19L3Q6ZPD9 716 aa21.11■□□□□ 0.97
C4orf48-201ENST00000409248 NYAP1Q6ZVC0 841 aa21.11■□□□□ 0.97
C4orf48-201ENST00000409248 ARHGAP12Q8IWW6 846 aa21.11■□□□□ 0.97
C4orf48-201ENST00000409248 PLPP6Q8IY26 295 aa21.11■□□□□ 0.97
C4orf48-201ENST00000409248 RGL4Q8IZJ4 473 aa21.11■□□□□ 0.97
C4orf48-201ENST00000409248 TMIEQ8NEW7 156 aa21.11■□□□□ 0.97
C4orf48-201ENST00000409248 CEP76Q8TAP6 659 aa21.11■□□□□ 0.97
C4orf48-201ENST00000409248 GRIN3AQ8TCU5 1115 aa21.11■□□□□ 0.97
C4orf48-201ENST00000409248 PPP1R16AQ96I34 528 aa21.11■□□□□ 0.97
C4orf48-201ENST00000409248 PBKQ96KB5 322 aa21.11■□□□□ 0.97
C4orf48-201ENST00000409248 TM6SF2Q9BZW4 377 aa21.11■□□□□ 0.97
C4orf48-201ENST00000409248 SP110Q9HB58 689 aa21.11■□□□□ 0.97
C4orf48-201ENST00000409248 DYRK4Q9NR20 520 aa21.11■□□□□ 0.97
C4orf48-201ENST00000409248 UBA2Q9UBT2 640 aaPredicted RBP21.11■□□□□ 0.97
C4orf48-201ENST00000409248 SERGEFQ9UGK8 458 aa21.11■□□□□ 0.97
C4orf48-201ENST00000409248 PILRBQ9UKJ0 227 aa21.11■□□□□ 0.97
C4orf48-201ENST00000409248 FRYLO94915 3013 aa21.11■□□□□ 0.97
C4orf48-201ENST00000409248 METTL12A8MUP2 240 aa21.1■□□□□ 0.97
C4orf48-201ENST00000409248 PRR5-ARHGAP8B1AHC4 643 aa21.1■□□□□ 0.97
C4orf48-201ENST00000409248 KPNA3O00505 521 aaPredicted RBP21.1■□□□□ 0.97
C4orf48-201ENST00000409248 KHNYNO15037 678 aaKnown RBP21.1■□□□□ 0.97
C4orf48-201ENST00000409248 ZNF821O75541 412 aaPredicted RBP21.1■□□□□ 0.97
C4orf48-201ENST00000409248 GNSP15586 552 aa21.1■□□□□ 0.97
C4orf48-201ENST00000409248 MX2P20592 715 aa21.1■□□□□ 0.97
C4orf48-201ENST00000409248 PAPOLAP51003 745 aaKnown RBP21.1■□□□□ 0.97
C4orf48-201ENST00000409248 CCNHP51946 323 aaPredicted RBP21.1■□□□□ 0.97
C4orf48-201ENST00000409248 ARHGAP8P85298 464 aa21.1■□□□□ 0.97
C4orf48-201ENST00000409248 GBE1Q04446 702 aa21.1■□□□□ 0.97
C4orf48-201ENST00000409248 AASDHQ4L235 1098 aaPredicted RBP21.1■□□□□ 0.97
C4orf48-201ENST00000409248 LEKR1Q6ZMV7 388 aa21.1■□□□□ 0.97
C4orf48-201ENST00000409248 BZW1Q7L1Q6 419 aaKnown RBP21.1■□□□□ 0.97
C4orf48-201ENST00000409248 RYBPQ8N488 228 aaPredicted RBP21.1■□□□□ 0.97
C4orf48-201ENST00000409248 ATPAF2Q8N5M1 289 aa21.1■□□□□ 0.97
C4orf48-201ENST00000409248 OR2AP1Q8NGE2 309 aa21.1■□□□□ 0.97
C4orf48-201ENST00000409248 C16orf45Q96MC5 204 aaPredicted RBP21.1■□□□□ 0.97
C4orf48-201ENST00000409248 GDAP1L1Q96MZ0 367 aa21.1■□□□□ 0.97
C4orf48-201ENST00000409248 HEPHQ9BQS7 1158 aa21.1■□□□□ 0.97
C4orf48-201ENST00000409248 NEUROG2Q9H2A3 272 aa21.1■□□□□ 0.97
C4orf48-201ENST00000409248 EVLQ9UI08 416 aaPredicted RBP21.1■□□□□ 0.97
C4orf48-201ENST00000409248 SARDHQ9UL12 918 aa21.1■□□□□ 0.97
C4orf48-201ENST00000409248 TPX2Q9ULW0 747 aaKnown RBP21.1■□□□□ 0.97
C4orf48-201ENST00000409248 SNX12Q9UMY4 172 aa21.1■□□□□ 0.97
C4orf48-201ENST00000409248 HEY1Q9Y5J3 304 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms