RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 ZNF354CQ86Y25 554 aa19.62■□□□□ 0.73
SMARCB1-204ENST00000407422 MARCH9Q86YJ5 346 aa19.62■□□□□ 0.73
SMARCB1-204ENST00000407422 PLPP6Q8IY26 295 aa19.62■□□□□ 0.73
SMARCB1-204ENST00000407422 EID2Q8N6I1 236 aa19.62■□□□□ 0.73
SMARCB1-204ENST00000407422 ZCCHC14Q8WYQ9 949 aaKnown RBP19.62■□□□□ 0.73
SMARCB1-204ENST00000407422 KLHDC7BQ96G42 594 aa19.62■□□□□ 0.73
SMARCB1-204ENST00000407422 TRIM7Q9C029 511 aa19.62■□□□□ 0.73
SMARCB1-204ENST00000407422 PARVAQ9NVD7 372 aa19.62■□□□□ 0.73
SMARCB1-204ENST00000407422 GPATCH2LQ9NWQ4 482 aa19.62■□□□□ 0.73
SMARCB1-204ENST00000407422 FADS3Q9Y5Q0 445 aa19.62■□□□□ 0.73
SMARCB1-204ENST00000407422 TMEM8BA6NDV4 472 aa19.61■□□□□ 0.73
SMARCB1-204ENST00000407422 KRIT1O00522 736 aa19.61■□□□□ 0.73
SMARCB1-204ENST00000407422 YKT6O15498 198 aa19.61■□□□□ 0.73
SMARCB1-204ENST00000407422 BUB1O43683 1085 aa19.61■□□□□ 0.73
SMARCB1-204ENST00000407422 PSMA2P25787 234 aa19.61■□□□□ 0.73
SMARCB1-204ENST00000407422 RXRGP48443 463 aa19.61■□□□□ 0.73
SMARCB1-204ENST00000407422 GEMIN4P57678 1058 aaKnown RBP19.61■□□□□ 0.73
SMARCB1-204ENST00000407422 CLDN2P57739 230 aa19.61■□□□□ 0.73
SMARCB1-204ENST00000407422 TMEM259Q4ZIN3 620 aa19.61■□□□□ 0.73
SMARCB1-204ENST00000407422 ATXN7L2Q5T6C5 722 aaPredicted RBP19.61■□□□□ 0.73
SMARCB1-204ENST00000407422 ARFGAP1Q8N6T3 406 aa19.61■□□□□ 0.73
SMARCB1-204ENST00000407422 OR2AP1Q8NGE2 309 aa19.61■□□□□ 0.73
SMARCB1-204ENST00000407422 HMCESQ96FZ2 354 aa19.61■□□□□ 0.73
SMARCB1-204ENST00000407422 EPAS1Q99814 870 aa19.61■□□□□ 0.73
SMARCB1-204ENST00000407422 CAAP1Q9H8G2 361 aa19.61■□□□□ 0.73
SMARCB1-204ENST00000407422 DDX3XO00571 662 aaKnown RBP eCLIP19.6■□□□□ 0.739e-12■■■■□ 22.2
SMARCB1-204ENST00000407422 SDC3O75056 442 aa19.6■□□□□ 0.73
SMARCB1-204ENST00000407422 TMCC1O94876 653 aa19.6■□□□□ 0.73
SMARCB1-204ENST00000407422 GSRP00390 522 aa19.6■□□□□ 0.73
SMARCB1-204ENST00000407422 SERPINC1P01008 464 aa19.6■□□□□ 0.73
SMARCB1-204ENST00000407422 FTLP02792 175 aaPredicted RBP19.6■□□□□ 0.73
SMARCB1-204ENST00000407422 THEGLP0DJG4 465 aa19.6■□□□□ 0.73
SMARCB1-204ENST00000407422 SKILP12757 684 aa19.6■□□□□ 0.73
SMARCB1-204ENST00000407422 PRKCIP41743 596 aa19.6■□□□□ 0.73
SMARCB1-204ENST00000407422 AIF1P55008 147 aa19.6■□□□□ 0.73
SMARCB1-204ENST00000407422 FGL2Q14314 439 aa19.6■□□□□ 0.73
SMARCB1-204ENST00000407422 KANSL1Q7Z3B3 1105 aa19.6■□□□□ 0.73
SMARCB1-204ENST00000407422 LUZP1Q86V48 1076 aa19.6■□□□□ 0.73
SMARCB1-204ENST00000407422 CBX8Q9HC52 389 aa19.6■□□□□ 0.73
SMARCB1-204ENST00000407422 C16orf96A6NNT2 1141 aa19.59■□□□□ 0.73
SMARCB1-204ENST00000407422 RASA4BC9J798 803 aa19.59■□□□□ 0.73
SMARCB1-204ENST00000407422 RASA4O43374 803 aa19.59■□□□□ 0.73
SMARCB1-204ENST00000407422 MAGEC1O60732 1142 aa19.59■□□□□ 0.73
SMARCB1-204ENST00000407422 HNRNPA2B1P22626 353 aaKnown RBP19.59■□□□□ 0.73
SMARCB1-204ENST00000407422 AKT2P31751 481 aa19.59■□□□□ 0.73
SMARCB1-204ENST00000407422 ABL2P42684 1182 aa19.59■□□□□ 0.73
SMARCB1-204ENST00000407422 SNRPD1P62314 119 aaKnown RBP19.59■□□□□ 0.73
SMARCB1-204ENST00000407422 KLHL30Q0D2K2 578 aa19.59■□□□□ 0.73
SMARCB1-204ENST00000407422 DNAJC3Q13217 504 aa19.59■□□□□ 0.73
SMARCB1-204ENST00000407422 MAPK8IP2Q13387 824 aaPredicted RBP19.59■□□□□ 0.73
SMARCB1-204ENST00000407422 CA9Q16790 459 aa19.59■□□□□ 0.73
SMARCB1-204ENST00000407422 MYLK3Q32MK0 819 aa19.59■□□□□ 0.73
SMARCB1-204ENST00000407422 PPP1R2P3Q6NXS1 205 aa19.59■□□□□ 0.73
SMARCB1-204ENST00000407422 GCNT7Q6ZNI0 430 aa19.59■□□□□ 0.73
SMARCB1-204ENST00000407422 TMPRSS7Q7RTY8 843 aa19.59■□□□□ 0.73
SMARCB1-204ENST00000407422 OXR1Q8N573 874 aa19.59■□□□□ 0.73
SMARCB1-204ENST00000407422 OR13H1Q8NG92 308 aa19.59■□□□□ 0.73
SMARCB1-204ENST00000407422 CNDP2Q96KP4 475 aaKnown RBP19.59■□□□□ 0.73
SMARCB1-204ENST00000407422 PEBP4Q96S96 227 aa19.59■□□□□ 0.73
SMARCB1-204ENST00000407422 CATSPERBQ9H7T0 1116 aa19.59■□□□□ 0.73
SMARCB1-204ENST00000407422 GGT7Q9UJ14 662 aa19.59■□□□□ 0.73
SMARCB1-204ENST00000407422 TMEM191CA6NGB0 347 aa19.58■□□□□ 0.73
SMARCB1-204ENST00000407422 WASH4PA8MWX3 477 aa19.58■□□□□ 0.73
SMARCB1-204ENST00000407422 LDOC1O95751 146 aaPredicted RBP19.58■□□□□ 0.73
SMARCB1-204ENST00000407422 CAPNS1P04632 268 aa19.58■□□□□ 0.73
SMARCB1-204ENST00000407422 UGT2B4P06133 528 aa19.58■□□□□ 0.73
SMARCB1-204ENST00000407422 YBEYP58557 167 aaPredicted RBP19.58■□□□□ 0.73
SMARCB1-204ENST00000407422 RPS21P63220 83 aaKnown RBP19.58■□□□□ 0.73
SMARCB1-204ENST00000407422 SERINC3Q13530 473 aa19.58■□□□□ 0.73
SMARCB1-204ENST00000407422 ZNF805Q5CZA5 627 aa19.58■□□□□ 0.73
SMARCB1-204ENST00000407422 DHRS13Q6UX07 377 aa19.58■□□□□ 0.73
SMARCB1-204ENST00000407422 UMODL1-AS1Q8N2C9 162 aa19.58■□□□□ 0.73
SMARCB1-204ENST00000407422 SLC17A9Q9BYT1 436 aa19.58■□□□□ 0.73
SMARCB1-204ENST00000407422 PCSK1NQ9UHG2 260 aa19.58■□□□□ 0.73
SMARCB1-204ENST00000407422 AP4E1Q9UPM8 1137 aa19.58■□□□□ 0.73
SMARCB1-204ENST00000407422 ITM2BQ9Y287 266 aa19.58■□□□□ 0.73
SMARCB1-204ENST00000407422 ACACAQ13085 2346 aa19.58■□□□□ 0.73
SMARCB1-204ENST00000407422 NBEAQ8NFP9 2946 aa19.58■□□□□ 0.73
SMARCB1-204ENST00000407422 APC2O95996 2303 aa19.58■□□□□ 0.72
SMARCB1-204ENST00000407422 FAM149AA5PLN7 773 aa19.58■□□□□ 0.72
SMARCB1-204ENST00000407422 ZSCAN5CA6NGD5 496 aaPredicted RBP19.58■□□□□ 0.72
SMARCB1-204ENST00000407422 ENC1O14682 589 aa19.58■□□□□ 0.72
SMARCB1-204ENST00000407422 RAD51BO15315 384 aa19.58■□□□□ 0.72
SMARCB1-204ENST00000407422 AP1G1O43747 822 aa19.58■□□□□ 0.72
SMARCB1-204ENST00000407422 POP4O95707 220 aaKnown RBP19.58■□□□□ 0.72
SMARCB1-204ENST00000407422 PAK4O96013 591 aaPredicted RBP19.58■□□□□ 0.72
SMARCB1-204ENST00000407422 GZMAP12544 262 aa19.58■□□□□ 0.72
SMARCB1-204ENST00000407422 DESP17661 470 aa19.58■□□□□ 0.72
SMARCB1-204ENST00000407422 TPI1P60174 286 aa19.58■□□□□ 0.72
SMARCB1-204ENST00000407422 KLHL40Q2TBA0 621 aa19.58■□□□□ 0.72
SMARCB1-204ENST00000407422 KIAA1161Q6NSJ0 714 aa19.58■□□□□ 0.72
SMARCB1-204ENST00000407422 SLC22A18ASQ8N1D0 253 aa19.58■□□□□ 0.72
SMARCB1-204ENST00000407422 LRIG1Q96JA1 1093 aa19.58■□□□□ 0.72
SMARCB1-204ENST00000407422 FEM1CQ96JP0 617 aa19.58■□□□□ 0.72
SMARCB1-204ENST00000407422 KLHL32Q96NJ5 620 aa19.58■□□□□ 0.72
SMARCB1-204ENST00000407422 CALN1Q9BXU9 219 aa19.58■□□□□ 0.72
SMARCB1-204ENST00000407422 DHX35Q9H5Z1 703 aaKnown RBP19.58■□□□□ 0.72
SMARCB1-204ENST00000407422 CNOT8Q9UFF9 292 aaKnown RBP19.58■□□□□ 0.72
SMARCB1-204ENST00000407422 SRRM3A6NNA2 597 aaPredicted RBP19.57■□□□□ 0.72
SMARCB1-204ENST00000407422 FGF10O15520 208 aaPredicted RBP19.57■□□□□ 0.72
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