RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 IL10RBQ08334 325 aa10.44□□□□□ -0.74
TSPAN9-202ENST00000407263 PAFAH1B3Q15102 231 aaKnown RBP10.44□□□□□ -0.74
TSPAN9-202ENST00000407263 SF3A2Q15428 464 aaKnown RBP10.44□□□□□ -0.74
TSPAN9-202ENST00000407263 CYTH1Q15438 398 aa10.44□□□□□ -0.74
TSPAN9-202ENST00000407263 FAM182AQ5T1J6 154 aa10.44□□□□□ -0.74
TSPAN9-202ENST00000407263 TMCO4Q5TGY1 634 aa10.44□□□□□ -0.74
TSPAN9-202ENST00000407263 LRRC38Q5VT99 294 aa10.44□□□□□ -0.74
TSPAN9-202ENST00000407263 AGBL4Q5VU57 503 aa10.44□□□□□ -0.74
TSPAN9-202ENST00000407263 FAM46CQ5VWP2 391 aa10.44□□□□□ -0.74
TSPAN9-202ENST00000407263 KAZNQ674X7 775 aa10.44□□□□□ -0.74
TSPAN9-202ENST00000407263 NCEH1Q6PIU2 408 aa10.44□□□□□ -0.74
TSPAN9-202ENST00000407263 NPNTQ6UXI9 565 aa10.44□□□□□ -0.74
TSPAN9-202ENST00000407263 SPOCD1Q6ZMY3 1216 aa10.44□□□□□ -0.74
TSPAN9-202ENST00000407263 USP30Q70CQ3 517 aa10.44□□□□□ -0.74
TSPAN9-202ENST00000407263 CNPY4Q8N129 248 aa10.44□□□□□ -0.74
TSPAN9-202ENST00000407263 TXLNBQ8N3L3 684 aa10.44□□□□□ -0.74
TSPAN9-202ENST00000407263 PLD5Q8N7P1 536 aa10.44□□□□□ -0.74
TSPAN9-202ENST00000407263 OR14C36Q8NHC7 312 aa10.44□□□□□ -0.74
TSPAN9-202ENST00000407263 HAUS1Q96CS2 278 aa10.44□□□□□ -0.74
TSPAN9-202ENST00000407263 LOXL4Q96JB6 756 aa10.44□□□□□ -0.74
TSPAN9-202ENST00000407263 RNF157Q96PX1 679 aa10.44□□□□□ -0.74
TSPAN9-202ENST00000407263 HEPHQ9BQS7 1158 aa10.44□□□□□ -0.74
TSPAN9-202ENST00000407263 SGK2Q9HBY8 427 aa10.44□□□□□ -0.74
TSPAN9-202ENST00000407263 FSCN3Q9NQT6 498 aa10.44□□□□□ -0.74
TSPAN9-202ENST00000407263 PPM1HQ9ULR3 514 aa10.44□□□□□ -0.74
TSPAN9-202ENST00000407263 FZD4Q9ULV1 537 aa10.44□□□□□ -0.74
TSPAN9-202ENST00000407263 PACSIN2Q9UNF0 486 aaPredicted RBP10.44□□□□□ -0.74
TSPAN9-202ENST00000407263 TTLL3Q9Y4R7 772 aa10.44□□□□□ -0.74
TSPAN9-202ENST00000407263 HEY1Q9Y5J3 304 aa10.44□□□□□ -0.74
TSPAN9-202ENST00000407263 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.44□□□□□ -0.74
TSPAN9-202ENST00000407263 LRP4O75096 1905 aa10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 EP300Q09472 2414 aaPredicted RBP10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 TTC24A2A3L6 582 aaPredicted RBP10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 BCLAF3A2AJT9 711 aaKnown RBP10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 MUSKO15146 869 aa10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 MAFKO60675 156 aa10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 CFIP05156 583 aa10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 KRT10P13645 584 aa10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 ITGB7P26010 798 aa10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 HOXD11P31277 338 aaPredicted RBP10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 CTNNA1P35221 906 aaKnown RBP10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 GARSP41250 739 aaKnown RBP10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 MAXP61244 160 aa10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 SLC10A7Q0GE19 358 aa10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 GALNT2Q10471 571 aa10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 LBRQ14739 615 aaKnown RBP10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 INO80DQ53TQ3 878 aaPredicted RBP10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 PIP5KL1Q5T9C9 394 aa10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 LAYNQ6UX15 382 aa10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 PRR23CQ6ZRP0 262 aa10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 KATNAL2Q8IYT4 538 aa10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 LRRC57Q8N9N7 239 aa10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 TSEN2Q8NCE0 465 aaKnown RBP10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 CASKIN2Q8WXE0 1202 aa10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 ISG20Q96AZ6 181 aaKnown RBP10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 ZNF419Q96HQ0 510 aaPredicted RBP10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 PPP1R16AQ96I34 528 aa10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 ZNF830Q96NB3 372 aaPredicted RBP10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 LZTFL1Q9NQ48 299 aa10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 SEMA4GQ9NTN9 838 aa10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 TMEM74BQ9NUR3 256 aa10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 EIF2B4Q9UI10 523 aaKnown RBP10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 GUCA1BQ9UMX6 200 aa10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 ITM2BQ9Y287 266 aa10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 SLCO1B1Q9Y6L6 691 aa10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 TDRD6O60522 2096 aaKnown RBP10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 RIF1Q5UIP0 2472 aaKnown RBP10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 GVINP1Q7Z2Y8 2422 aa10.43□□□□□ -0.74
TSPAN9-202ENST00000407263 CACNA1EQ15878 2313 aa10.42□□□□□ -0.74
TSPAN9-202ENST00000407263 hCG_1818297A0A087WSY0 165 aa10.42□□□□□ -0.74
TSPAN9-202ENST00000407263 CXorf51AA0A1B0GTR3 108 aa10.42□□□□□ -0.74
TSPAN9-202ENST00000407263 LRRC72A6NJI9 287 aa10.42□□□□□ -0.74
TSPAN9-202ENST00000407263 PLRG1O43660 514 aaKnown RBP10.42□□□□□ -0.74
TSPAN9-202ENST00000407263 NRDCO43847 1150 aa10.42□□□□□ -0.74
TSPAN9-202ENST00000407263 IGHV4-34P06331 123 aa10.42□□□□□ -0.74
TSPAN9-202ENST00000407263 CCDC175P0C221 793 aa10.42□□□□□ -0.74
TSPAN9-202ENST00000407263 C7P10643 843 aa10.42□□□□□ -0.74
TSPAN9-202ENST00000407263 PECAM1P16284 738 aaPredicted RBP10.42□□□□□ -0.74
TSPAN9-202ENST00000407263 CTNNA2P26232 953 aa10.42□□□□□ -0.74
TSPAN9-202ENST00000407263 MAT2AP31153 395 aaKnown RBP10.42□□□□□ -0.74
TSPAN9-202ENST00000407263 ABL2P42684 1182 aa10.42□□□□□ -0.74
TSPAN9-202ENST00000407263 CDKN2BP42772 138 aa10.42□□□□□ -0.74
TSPAN9-202ENST00000407263 MMP13P45452 471 aa10.42□□□□□ -0.74
TSPAN9-202ENST00000407263 NEK3P51956 506 aa10.42□□□□□ -0.74
TSPAN9-202ENST00000407263 SFSWAPQ12872 951 aaKnown RBP10.42□□□□□ -0.74
TSPAN9-202ENST00000407263 SLC10A2Q12908 348 aaPredicted RBP10.42□□□□□ -0.74
TSPAN9-202ENST00000407263 GSE1Q14687 1217 aa10.42□□□□□ -0.74
TSPAN9-202ENST00000407263 IFI16Q16666 785 aaKnown RBP10.42□□□□□ -0.74
TSPAN9-202ENST00000407263 MYLK3Q32MK0 819 aa10.42□□□□□ -0.74
TSPAN9-202ENST00000407263 AASDHQ4L235 1098 aaPredicted RBP10.42□□□□□ -0.74
TSPAN9-202ENST00000407263 TRIM61Q5EBN2 209 aa10.42□□□□□ -0.74
TSPAN9-202ENST00000407263 SYCP2LQ5T4T6 812 aa10.42□□□□□ -0.74
TSPAN9-202ENST00000407263 KIAA0895LQ68EN5 471 aa10.42□□□□□ -0.74
TSPAN9-202ENST00000407263 SLC9A4Q6AI14 798 aa10.42□□□□□ -0.74
TSPAN9-202ENST00000407263 AADACL2Q6P093 401 aa10.42□□□□□ -0.74
TSPAN9-202ENST00000407263 B4GALNT4Q76KP1 1039 aa10.42□□□□□ -0.74
TSPAN9-202ENST00000407263 ERN2Q76MJ5 926 aaKnown RBP10.42□□□□□ -0.74
TSPAN9-202ENST00000407263 PEX26Q7Z412 305 aa10.42□□□□□ -0.74
TSPAN9-202ENST00000407263 PGBD5Q8N414 524 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms