RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 SCML4Q8N228 414 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 RDH11Q8TC12 318 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 USP33Q8TEY7 942 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 JADE3Q92613 823 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 SLC39A8Q9C0K1 460 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 FAM96AQ9H5X1 160 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 XPR1Q9UBH6 696 aa9.98□□□□□ -0.81
MSH2-202ENST00000406134 COPG1Q9Y678 874 aaKnown RBP9.98□□□□□ -0.81
MSH2-202ENST00000406134 MAGEB16A2A368 324 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 SDHDO14521 159 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 PEX1O43933 1283 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 B4GALT3O60512 393 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 ITGB1P05556 798 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 MMP2P08253 660 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 NAGLUP54802 743 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 RBM20Q5T481 1227 aaKnown RBP9.97□□□□□ -0.81
MSH2-202ENST00000406134 CWF19L1Q69YN2 538 aaKnown RBP9.97□□□□□ -0.81
MSH2-202ENST00000406134 C8orf82Q6P1X6 216 aaPredicted RBP9.97□□□□□ -0.81
MSH2-202ENST00000406134 TMEM207Q6UWW9 146 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 CHSY3Q70JA7 882 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 TMC7Q7Z402 723 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 C2CD4AQ8NCU7 369 aaPredicted RBP9.97□□□□□ -0.81
MSH2-202ENST00000406134 FCRL5Q96RD9 977 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 WDCPQ9H6R7 721 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 FAM105AQ9NUU6 356 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 ARHGAP26Q9UNA1 814 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 ANKRD6Q9Y2G4 727 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 PTCH2Q9Y6C5 1203 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 PRSS51A0A1B0GVH4 220 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 H2AFYO75367 372 aaKnown RBP9.97□□□□□ -0.81
MSH2-202ENST00000406134 VCLP18206 1134 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 ZNF33AQ06730 810 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 PTK2BQ14289 1009 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 CNPY1Q3B7I2 92 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 CCDC117Q8IWD4 279 aaPredicted RBP9.97□□□□□ -0.81
MSH2-202ENST00000406134 PPFIBP2Q8ND30 876 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 HIPK4Q8NE63 616 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 TRPV1Q8NER1 839 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 RCN3Q96D15 328 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 VAT1Q99536 393 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 TBL1YQ9BQ87 522 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 KLHL4Q9C0H6 718 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 TASP1Q9H6P5 420 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 CDH9Q9ULB4 789 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 INPP5FQ9Y2H2 1132 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 NEMP2A6NFY4 417 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 UBFD1O14562 309 aaKnown RBP9.97□□□□□ -0.81
MSH2-202ENST00000406134 XPOTO43592 962 aaKnown RBP9.97□□□□□ -0.81
MSH2-202ENST00000406134 CABYRO75952 493 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 POU6F1Q14863 301 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 KDELC1Q6UW63 502 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 RANBP10Q6VN20 620 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 SCD5Q86SK9 330 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 C14orf80Q86SX3 495 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.97□□□□□ -0.81
MSH2-202ENST00000406134 ZFAND2BQ8WV99 257 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 SMARCD1Q96GM5 515 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 CATSPER2Q96P56 530 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 OMDQ99983 421 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 FERMT1Q9BQL6 677 aa9.97□□□□□ -0.81
MSH2-202ENST00000406134 SENP6Q9GZR1 1112 aaPredicted RBP9.97□□□□□ -0.81
MSH2-202ENST00000406134 RGSL1A5PLK6 1076 aa9.96□□□□□ -0.81
MSH2-202ENST00000406134 CAPN8A6NHC0 703 aa9.96□□□□□ -0.81
MSH2-202ENST00000406134 CASTOR2A6NHX0 329 aa9.96□□□□□ -0.81
MSH2-202ENST00000406134 FBP2O00757 339 aa9.96□□□□□ -0.81
MSH2-202ENST00000406134 MSI1O43347 362 aaKnown RBP9.96□□□□□ -0.81
MSH2-202ENST00000406134 DNAJA2O60884 412 aa9.96□□□□□ -0.81
MSH2-202ENST00000406134 HSPA1AP0DMV8 641 aaKnown RBP9.96□□□□□ -0.81
MSH2-202ENST00000406134 HSPA1BP0DMV9 641 aaKnown RBP9.96□□□□□ -0.81
MSH2-202ENST00000406134 CCNCP24863 283 aa9.96□□□□□ -0.81
MSH2-202ENST00000406134 CTGFP29279 349 aa9.96□□□□□ -0.81
MSH2-202ENST00000406134 PPARGP37231 505 aaPredicted RBP9.96□□□□□ -0.81
MSH2-202ENST00000406134 NUDT2P50583 147 aa9.96□□□□□ -0.81
MSH2-202ENST00000406134 C1QTNF8P60827 252 aa9.96□□□□□ -0.81
MSH2-202ENST00000406134 SULT2A1Q06520 285 aa9.96□□□□□ -0.81
MSH2-202ENST00000406134 TWF2Q6IBS0 349 aaKnown RBP9.96□□□□□ -0.81
MSH2-202ENST00000406134 TMEM86AQ8N2M4 240 aa9.96□□□□□ -0.81
MSH2-202ENST00000406134 METTL25Q8N6Q8 603 aa9.96□□□□□ -0.81
MSH2-202ENST00000406134 TMEM102Q8N9M5 508 aaPredicted RBP9.96□□□□□ -0.81
MSH2-202ENST00000406134 ILKAPQ9H0C8 392 aaPredicted RBP9.96□□□□□ -0.81
MSH2-202ENST00000406134 AGO3Q9H9G7 860 aaKnown RBP9.96□□□□□ -0.81
MSH2-202ENST00000406134 MRM3Q9HC36 420 aaKnown RBP9.96□□□□□ -0.81
MSH2-202ENST00000406134 PDP2Q9P2J9 529 aa9.96□□□□□ -0.81
MSH2-202ENST00000406134 TXNDC16Q9P2K2 825 aa9.96□□□□□ -0.81
MSH2-202ENST00000406134 ST3GAL5Q9UNP4 418 aa9.96□□□□□ -0.81
MSH2-202ENST00000406134 RUVBL2Q9Y230 463 aaKnown RBP9.96□□□□□ -0.81
MSH2-202ENST00000406134 TCAF1Q9Y4C2 921 aa9.96□□□□□ -0.81
MSH2-202ENST00000406134 SCN8AQ9UQD0 1980 aa9.96□□□□□ -0.81
MSH2-202ENST00000406134 THSD7BQ9C0I4 1608 aa9.96□□□□□ -0.81
MSH2-202ENST00000406134 KCNU1A8MYU2 1149 aa9.96□□□□□ -0.81
MSH2-202ENST00000406134 IRAK2O43187 625 aa9.96□□□□□ -0.81
MSH2-202ENST00000406134 CYP11A1P05108 521 aa9.96□□□□□ -0.81
MSH2-202ENST00000406134 BDNFP23560 247 aa9.96□□□□□ -0.81
MSH2-202ENST00000406134 PSMD8P48556 350 aa9.96□□□□□ -0.81
MSH2-202ENST00000406134 LHX1P48742 406 aa9.96□□□□□ -0.81
MSH2-202ENST00000406134 SCNN1GP51170 649 aa9.96□□□□□ -0.81
MSH2-202ENST00000406134 TAS2R39P59534 338 aa9.96□□□□□ -0.81
MSH2-202ENST00000406134 RAB10P61026 200 aa9.96□□□□□ -0.81
MSH2-202ENST00000406134 YBX1P67809 324 aaKnown RBP9.96□□□□□ -0.81
MSH2-202ENST00000406134 IRF5Q13568 498 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms