RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 ST3GAL5Q9UNP4 418 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 SLC31A1O15431 190 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 SMAD3P84022 425 aaKnown RBP11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 BROXQ5VW32 411 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 AENQ8WTP8 325 aaKnown RBP11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 C9orf72Q96LT7 481 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 CHP1Q99653 195 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 MBD2Q9UBB5 411 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 RABGEF1Q9UJ41 708 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 CEMIPQ8WUJ3 1361 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 DDTLA6NHG4 134 aaPredicted RBP11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 LACTBL1A8MY62 500 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 SEC22BO75396 215 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 UCHL3P15374 230 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 CCNA2P20248 432 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 GDI1P31150 447 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 CSTF2P33240 577 aaKnown RBP eCLIP11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 MYL6P60660 151 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 HSPA14Q0VDF9 509 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 C1DQ13901 141 aaKnown RBP11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 VITQ6UXI7 678 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 WDR49Q8IV35 697 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 FBXO15Q8NCQ5 510 aaPredicted RBP11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 OR10H5Q8NGA6 315 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 MROH1Q8NDA8 1641 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 TMEM120BA0PK00 339 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 TTC34A8MYJ7 566 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 B4DGG1 531 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 SNX4O95219 450 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 CCDC166P0CW27 439 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 ZNF677Q86XU0 584 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 MREGQ8N565 214 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 OR10Q1Q8NGQ4 319 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 KLK6Q92876 244 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 TOP1MTQ969P6 601 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 GAL3ST4Q96RP7 486 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 DPYSL5Q9BPU6 564 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 RIMS1Q86UR5 1692 aaKnown RBP11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 NR5A2O00482 541 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 GRM6O15303 877 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 PPLO60437 1756 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 ATG13O75143 517 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 USP1O94782 785 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 MLYCDO95822 493 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 CATP04040 527 aaKnown RBP11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 RBMS1P29558 406 aaKnown RBP11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 NPTX2P47972 431 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 RTP1P59025 263 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 MPPE1Q53F39 396 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 SPATA31D1Q6ZQQ2 1576 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 LENG9Q96B70 501 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 NUSAP1Q9BXS6 441 aaKnown RBP11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 TKTL2Q9H0I9 626 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 COPS7AQ9UBW8 275 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 RIMKLBQ9ULI2 386 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 ASF1AQ9Y294 204 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 TMX2Q9Y320 296 aa11.08□□□□□ -0.64
CACNA1C-216ENST00000399638 SMIM31A0A1B0GVY4 71 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 CD3EAPO15446 510 aaKnown RBP11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 SLC25A14O95258 325 aaPredicted RBP11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 KCNH1O95259 989 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 ITGAVP06756 1048 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 FSHRP23945 695 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 MAPK8P45983 427 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 ARHGDIBP52566 201 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 MADCAM1Q13477 382 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 TRIQKQ629K1 86 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 SYDE1Q6ZW31 735 aaPredicted RBP11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 GALNT13Q8IUC8 556 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 SLC2A14Q8TDB8 520 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 ERP27Q96DN0 273 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 ZIM3Q96PE6 472 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 POP1Q99575 1024 aaKnown RBP11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 NPHS2Q9NP85 383 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 DNAJC28Q9NX36 388 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 FAM227AF5H4B4 570 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 DBIP07108 87 aaKnown RBP11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 PTPN2P17706 415 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 TPH1P17752 444 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 CTPS1P17812 591 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 MMP13P45452 471 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 STARP49675 285 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 NFYCQ13952 458 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 PITRM1Q5JRX3 1037 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 PDZK1Q5T2W1 519 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 KCTD8Q6ZWB6 473 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 PRCCQ92733 491 aaPredicted RBP11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 COLEC10Q9Y6Z7 277 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 SHOX2O60902 331 aaPredicted RBP11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 GDI2P50395 445 aaKnown RBP11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 C2orf76Q3KRA6 126 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 PARP8Q8N3A8 854 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 MPP5Q8N3R9 675 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 FAM120BQ96EK7 910 aaKnown RBP11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 TTPALQ9BTX7 342 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 ADAM7Q9H2U9 754 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 ASB8Q9H765 288 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 RAD54BQ9Y620 910 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 A0A0A6YYK5 440 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms