RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 PSMD3O43242 534 aa25.91■■□□□ 1.74
COL13A1-203ENST00000398969 CACNG3O60359 315 aa25.91■■□□□ 1.74
COL13A1-203ENST00000398969 MYL3P08590 195 aa25.91■■□□□ 1.74
COL13A1-203ENST00000398969 PABPC4LP0CB38 370 aaKnown RBP25.91■■□□□ 1.74
COL13A1-203ENST00000398969 SREBF2Q12772 1141 aa25.91■■□□□ 1.74
COL13A1-203ENST00000398969 PCID2Q5JVF3 399 aa25.91■■□□□ 1.74
COL13A1-203ENST00000398969 NXNQ6DKJ4 435 aa25.91■■□□□ 1.74
COL13A1-203ENST00000398969 PKN3Q6P5Z2 889 aa25.91■■□□□ 1.74
COL13A1-203ENST00000398969 CNTN4Q8IWV2 1026 aa25.91■■□□□ 1.74
COL13A1-203ENST00000398969 PGAM4Q8N0Y7 254 aa25.91■■□□□ 1.74
COL13A1-203ENST00000398969 SPATA22Q8NHS9 363 aa25.91■■□□□ 1.74
COL13A1-203ENST00000398969 ACOT9Q9Y305 439 aa25.91■■□□□ 1.74
COL13A1-203ENST00000398969 HHLA1C9JL84 531 aa25.91■■□□□ 1.74
COL13A1-203ENST00000398969 AP1G1O43747 822 aa25.91■■□□□ 1.74
COL13A1-203ENST00000398969 DNAJB1P25685 340 aa25.91■■□□□ 1.74
COL13A1-203ENST00000398969 MRPS22P82650 360 aaKnown RBP25.91■■□□□ 1.74
COL13A1-203ENST00000398969 MPP1Q00013 466 aa25.91■■□□□ 1.74
COL13A1-203ENST00000398969 CEACAM7Q14002 265 aa25.91■■□□□ 1.74
COL13A1-203ENST00000398969 ZNF460Q14592 562 aa25.91■■□□□ 1.74
COL13A1-203ENST00000398969 UGP2Q16851 508 aa25.91■■□□□ 1.74
COL13A1-203ENST00000398969 PM20D1Q6GTS8 502 aa25.91■■□□□ 1.74
COL13A1-203ENST00000398969 DENND6AQ8IWF6 608 aa25.91■■□□□ 1.74
COL13A1-203ENST00000398969 GPR78Q96P69 363 aa25.91■■□□□ 1.74
COL13A1-203ENST00000398969 TSGA13Q96PP4 275 aa25.91■■□□□ 1.74
COL13A1-203ENST00000398969 TSPYL2Q9H2G4 693 aaPredicted RBP25.91■■□□□ 1.74
COL13A1-203ENST00000398969 ZBTB26Q9HCK0 441 aa25.91■■□□□ 1.74
COL13A1-203ENST00000398969 TIMM13Q9Y5L4 95 aaPredicted RBP25.91■■□□□ 1.74
COL13A1-203ENST00000398969 PGK1P00558 417 aa25.9■■□□□ 1.74
COL13A1-203ENST00000398969 TLR1Q15399 786 aa25.9■■□□□ 1.74
COL13A1-203ENST00000398969 TWF2Q6IBS0 349 aaKnown RBP25.9■■□□□ 1.74
COL13A1-203ENST00000398969 CEP97Q8IW35 865 aa25.9■■□□□ 1.74
COL13A1-203ENST00000398969 MFSD6LQ8IWD5 586 aa25.9■■□□□ 1.74
COL13A1-203ENST00000398969 MARK4Q96L34 752 aa25.9■■□□□ 1.74
COL13A1-203ENST00000398969 TBL1YQ9BQ87 522 aa25.9■■□□□ 1.74
COL13A1-203ENST00000398969 C15orf38-AP3S2A0A0A6YYH1 394 aa25.9■■□□□ 1.74
COL13A1-203ENST00000398969 DENRO43583 198 aaKnown RBP25.9■■□□□ 1.74
COL13A1-203ENST00000398969 PKNOX1P55347 436 aa25.9■■□□□ 1.74
COL13A1-203ENST00000398969 RAB10P61026 200 aa25.9■■□□□ 1.74
COL13A1-203ENST00000398969 CTBP1Q13363 440 aa25.9■■□□□ 1.74
COL13A1-203ENST00000398969 PDCD2Q16342 344 aaPredicted RBP25.9■■□□□ 1.74
COL13A1-203ENST00000398969 DCLRE1AQ6PJP8 1040 aa25.9■■□□□ 1.74
COL13A1-203ENST00000398969 ARPINQ7Z6K5 226 aa25.9■■□□□ 1.74
COL13A1-203ENST00000398969 WDR41Q9HAD4 459 aa25.9■■□□□ 1.74
COL13A1-203ENST00000398969 DMAP1Q9NPF5 467 aaPredicted RBP25.9■■□□□ 1.74
COL13A1-203ENST00000398969 AAR2Q9Y312 384 aaKnown RBP25.9■■□□□ 1.74
COL13A1-203ENST00000398969 CFLARO15519 480 aa25.89■■□□□ 1.74
COL13A1-203ENST00000398969 TADA2AO75478 443 aa25.89■■□□□ 1.74
COL13A1-203ENST00000398969 SRGAP2BP0DMP2 458 aa25.89■■□□□ 1.74
COL13A1-203ENST00000398969 ENO3P13929 434 aaPredicted RBP25.89■■□□□ 1.74
COL13A1-203ENST00000398969 MSX2P35548 267 aaPredicted RBP25.89■■□□□ 1.74
COL13A1-203ENST00000398969 DPP6P42658 865 aa25.89■■□□□ 1.74
COL13A1-203ENST00000398969 LHX1P48742 406 aa25.89■■□□□ 1.74
COL13A1-203ENST00000398969 CRYBB1P53674 252 aaPredicted RBP25.89■■□□□ 1.74
COL13A1-203ENST00000398969 COG7P83436 770 aa25.89■■□□□ 1.74
COL13A1-203ENST00000398969 POU6F1Q14863 301 aa25.89■■□□□ 1.74
COL13A1-203ENST00000398969 TSTD2Q5T7W7 516 aa25.89■■□□□ 1.74
COL13A1-203ENST00000398969 ZFP1Q6P2D0 407 aa25.89■■□□□ 1.74
COL13A1-203ENST00000398969 ARHGAP36Q6ZRI8 547 aa25.89■■□□□ 1.74
COL13A1-203ENST00000398969 MARVELD2Q8N4S9 558 aa25.89■■□□□ 1.74
COL13A1-203ENST00000398969 USP13Q92995 863 aaPredicted RBP25.89■■□□□ 1.74
COL13A1-203ENST00000398969 NXNL1Q96CM4 212 aa25.89■■□□□ 1.74
COL13A1-203ENST00000398969 ZIC5Q96T25 663 aa25.89■■□□□ 1.74
COL13A1-203ENST00000398969 FAM95CA0A1B0GW59 222 aa25.89■■□□□ 1.73
COL13A1-203ENST00000398969 VAPBO95292 243 aa25.89■■□□□ 1.73
COL13A1-203ENST00000398969 MT-CYBP00156 380 aaPredicted RBP25.89■■□□□ 1.73
COL13A1-203ENST00000398969 MS4A2Q01362 244 aa25.89■■□□□ 1.73
COL13A1-203ENST00000398969 ZNF33AQ06730 810 aa25.89■■□□□ 1.73
COL13A1-203ENST00000398969 ADGRE1Q14246 886 aa25.89■■□□□ 1.73
COL13A1-203ENST00000398969 RARS2Q5T160 578 aaKnown RBP25.89■■□□□ 1.73
COL13A1-203ENST00000398969 TAC4Q86UU9 113 aa25.89■■□□□ 1.73
COL13A1-203ENST00000398969 TMEM126BQ8IUX1 230 aa25.89■■□□□ 1.73
COL13A1-203ENST00000398969 PDCD6IPQ8WUM4 868 aaKnown RBP25.89■■□□□ 1.73
COL13A1-203ENST00000398969 LRGUKQ96M69 825 aa25.89■■□□□ 1.73
COL13A1-203ENST00000398969 RIMS3Q9UJD0 308 aa25.89■■□□□ 1.73
COL13A1-203ENST00000398969 COPG1Q9Y678 874 aaKnown RBP25.89■■□□□ 1.73
COL13A1-203ENST00000398969 PTCH2Q9Y6C5 1203 aa25.89■■□□□ 1.73
COL13A1-203ENST00000398969 SLC4A7Q9Y6M7 1214 aa25.89■■□□□ 1.73
COL13A1-203ENST00000398969 STMN1P16949 149 aa25.88■■□□□ 1.73
COL13A1-203ENST00000398969 FSCN1Q16658 493 aaKnown RBP25.88■■□□□ 1.73
COL13A1-203ENST00000398969 TMEM86AQ8N2M4 240 aa25.88■■□□□ 1.73
COL13A1-203ENST00000398969 SPATA6LQ8N4H0 392 aa25.88■■□□□ 1.73
COL13A1-203ENST00000398969 KDM1BQ8NB78 822 aa25.88■■□□□ 1.73
COL13A1-203ENST00000398969 FTHL17Q9BXU8 183 aa25.88■■□□□ 1.73
COL13A1-203ENST00000398969 RHOBTB2Q9BYZ6 727 aa25.88■■□□□ 1.73
COL13A1-203ENST00000398969 BCAP29Q9UHQ4 241 aa25.88■■□□□ 1.73
COL13A1-203ENST00000398969 FNDC1Q4ZHG4 1894 aaPredicted RBP25.88■■□□□ 1.73
COL13A1-203ENST00000398969 MEIS3P2A8K0S8 358 aa25.88■■□□□ 1.73
COL13A1-203ENST00000398969 DFFAO00273 331 aa25.88■■□□□ 1.73
COL13A1-203ENST00000398969 ARNTP27540 789 aa25.88■■□□□ 1.73
COL13A1-203ENST00000398969 TM4SF4P48230 202 aa25.88■■□□□ 1.73
COL13A1-203ENST00000398969 ARCN1P48444 511 aaKnown RBP25.88■■□□□ 1.73
COL13A1-203ENST00000398969 POLD2P49005 469 aa25.88■■□□□ 1.73
COL13A1-203ENST00000398969 CCNYL1Q8N7R7 359 aa25.88■■□□□ 1.73
COL13A1-203ENST00000398969 BHLHE22Q8NFJ8 381 aaPredicted RBP25.88■■□□□ 1.73
COL13A1-203ENST00000398969 ZNF419Q96HQ0 510 aaPredicted RBP25.88■■□□□ 1.73
COL13A1-203ENST00000398969 EFCAB1Q9HAE3 211 aa25.88■■□□□ 1.73
COL13A1-203ENST00000398969 TMEM233B4DJY2 109 aa25.87■■□□□ 1.73
COL13A1-203ENST00000398969 DNAJA2O60884 412 aa25.87■■□□□ 1.73
COL13A1-203ENST00000398969 ME2P23368 584 aa25.87■■□□□ 1.73
COL13A1-203ENST00000398969 ART3Q13508 389 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms