RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 DSG1Q02413 1049 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 ADCY1Q08828 1119 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 RFX4Q33E94 735 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 ARMC12Q5T9G4 340 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 SERPINA13PQ6UXR4 307 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 Q8N402 240 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 MTMR14Q8NCE2 650 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 ACTRT2Q8TDY3 377 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 PPP1R14AQ96A00 147 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 EME1Q96AY2 570 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 ZYG11BQ9C0D3 744 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 KLHL31Q9H511 634 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 TUT1Q9H6E5 874 aaKnown RBP2.76□□□□□ -1.97
CHD9-202ENST00000398510 NOL11Q9H8H0 719 aaKnown RBP2.76□□□□□ -1.97
CHD9-202ENST00000398510 POPDC2Q9HBU9 364 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 GULP1Q9UBP9 304 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 OAS3Q9Y6K5 1087 aaKnown RBP2.76□□□□□ -1.97
CHD9-202ENST00000398510 POLRMTO00411 1230 aaKnown RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 CER1O95813 267 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 ATP5A1P25705 553 aaKnown RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 OR1E1P30953 314 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 RPS6KA3P51812 740 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 HERVK_113P62684 666 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 POU5F1BQ06416 359 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 TAF13Q15543 124 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 RABL6Q3YEC7 729 aaPredicted RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 ZRANB3Q5FWF4 1079 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 CHRDL2Q6WN34 429 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 STOX1Q6ZVD7 989 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 PLPPR4Q7Z2D5 763 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 POLNQ7Z5Q5 900 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 LINC00471Q8N535 108 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 C10orf53Q8N6V4 93 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 FOXJ1Q92949 421 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 OTULINQ96BN8 352 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 CXorf40BQ96DE9 158 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 CSPG4P5Q96PW8 444 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 TUBGCP5Q96RT8 1024 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 PLEKHF1Q96S99 279 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 PELOQ9BRX2 385 aaKnown RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 SLC39A3Q9BRY0 314 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 MLPHQ9BV36 600 aaPredicted RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 NELFAQ9H3P2 528 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 EXO5Q9H790 373 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 PCMTD2Q9NV79 361 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 C14orf105Q9NVL8 296 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 INTS13Q9NVM9 706 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 AURKCQ9UQB9 309 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 CAB39Q9Y376 341 aaPredicted RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 RTCAO00442 366 aaKnown RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 OR10H2O60403 315 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 ITGA10O75578 1167 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 RECQL5O94762 991 aaPredicted RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 DDHD2O94830 711 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 SEC31AO94979 1220 aaKnown RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 ATG7O95352 703 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 APOC1P02654 83 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 CCDC159P0C7I6 412 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 CCNYL3P0C7X3 344 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 MBL2P11226 248 aaPredicted RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 LRPAP1P30533 357 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 CCKBRP32239 447 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 GGCXP38435 758 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 CLK1P49759 484 aaKnown RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 CLCN6P51797 869 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 PPIDQ08752 370 aaKnown RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 ILF3Q12906 894 aaKnown RBP eCLIP2.75□□□□□ -1.976e-9■■■■□ 20.7
CHD9-202ENST00000398510 TTI2Q6NXR4 508 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 C15orf52Q6ZUT6 534 aaKnown RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 STK32CQ86UX6 486 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 LGI2Q8N0V4 545 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 FUBP3Q96I24 572 aaKnown RBP eCLIP2.75□□□□□ -1.971e-6■■□□□ 12.9
CHD9-202ENST00000398510 ARL5BQ96KC2 179 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 RNF145Q96MT1 663 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 TMEM47Q9BQJ4 181 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 TTPALQ9BTX7 342 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 ZSCAN5AQ9BUG6 496 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 PRRG4Q9BZD6 226 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 HIPK3Q9H422 1215 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 FAM217BQ9NTX9 383 aaPredicted RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 WASF3Q9UPY6 502 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 DAGLAQ9Y4D2 1042 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 SOWAHDA6NJG2 315 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 PPP1R3GB7ZBB8 358 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 F8W810 466 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 PLK4O00444 970 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 PRMT5O14744 637 aaPredicted RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 ATP9AO75110 1047 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 GLRA3O75311 464 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 NUDT14O95848 222 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 PABPC4LP0CB38 370 aaKnown RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 UBA1P22314 1058 aaKnown RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 TCEA1P23193 301 aaKnown RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 GSTM2P28161 218 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 GPC1P35052 558 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 RRADP55042 308 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 CHRNB3Q05901 458 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 RBPJQ06330 500 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 NR1D2Q14995 579 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 HSF5Q4G112 596 aaPredicted RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms