RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 CYP1B1Q16678 543 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 TRIM71Q2Q1W2 868 aaKnown RBP8.37□□□□□ -1.07
PTPRD-204ENST00000397606 MS4A13Q5J8X5 152 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 TXNRD3NBQ6F5E7 133 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 CCSAPQ6IQ19 270 aaPredicted RBP8.37□□□□□ -1.07
PTPRD-204ENST00000397606 RTN4RL1Q86UN2 441 aaPredicted RBP8.37□□□□□ -1.07
PTPRD-204ENST00000397606 DDIASQ8IXT1 998 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 ZNF567Q8N184 647 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 SLC43A3Q8NBI5 491 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 TMEM159Q96B96 161 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 TEKT5Q96M29 485 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 WWP1Q9H0M0 922 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 ASB8Q9H765 288 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 TMBIM4Q9HC24 238 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 ZDHHC7Q9NXF8 308 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 RUVBL2Q9Y230 463 aaKnown RBP8.37□□□□□ -1.07
PTPRD-204ENST00000397606 CHKBQ9Y259 395 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 TBC1D30Q9Y2I9 924 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 RAI2Q9Y5P3 530 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.37□□□□□ -1.07
PTPRD-204ENST00000397606 LEFTY2O00292 366 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 ALOX15BO15296 676 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 AP2A1O95782 977 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 ABHD2P08910 425 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 ADH5P11766 374 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 GDI1P31150 447 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 TTPAP49638 278 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 GUCY1A3Q02108 690 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 PPIDQ08752 370 aaKnown RBP8.37□□□□□ -1.07
PTPRD-204ENST00000397606 GRSF1Q12849 480 aaKnown RBP eCLIP8.37□□□□□ -1.07
PTPRD-204ENST00000397606 DNAJC3Q13217 504 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 DMC1Q14565 340 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 ARMC6Q6NXE6 501 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 EFL1Q7Z2Z2 1120 aaKnown RBP8.37□□□□□ -1.07
PTPRD-204ENST00000397606 CPNE8Q86YQ8 564 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 TMEM130Q8N3G9 435 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 CYP2S1Q96SQ9 504 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 PRMT1Q99873 361 aaKnown RBP8.37□□□□□ -1.07
PTPRD-204ENST00000397606 WWOXQ9NZC7 414 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 HSFX1Q9UBD0 423 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 EVLQ9UI08 416 aaPredicted RBP8.37□□□□□ -1.07
PTPRD-204ENST00000397606 DCTN4Q9UJW0 460 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 MYO9BQ13459 2157 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 IFRD1O00458 451 aaPredicted RBP8.37□□□□□ -1.07
PTPRD-204ENST00000397606 NVLO15381 856 aaKnown RBP8.37□□□□□ -1.07
PTPRD-204ENST00000397606 INSIG1O15503 277 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 UGT2B4P06133 528 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 BMPR2Q13873 1038 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 CBX2Q14781 532 aaPredicted RBP8.37□□□□□ -1.07
PTPRD-204ENST00000397606 CCDC142Q17RM4 750 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 LYPLAL1Q5VWZ2 237 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 ZDHHC20Q5W0Z9 365 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 NCBP2-AS2Q69YL0 99 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 TTC30BQ8N4P2 665 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 MRPL43Q8N983 215 aaKnown RBP8.37□□□□□ -1.07
PTPRD-204ENST00000397606 PPFIBP2Q8ND30 876 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 OR6K2Q8NGY2 324 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 SLC35B2Q8TB61 432 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 PTCD2Q8WV60 388 aaKnown RBP8.37□□□□□ -1.07
PTPRD-204ENST00000397606 NECTIN4Q96NY8 510 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 TXLNGQ9NUQ3 528 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 TCP11X1B4DZS4 312 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 F8W810 466 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 QSOX1O00391 747 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 TCF4P15884 667 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 PFKLP17858 780 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 ERVK-21P61565 698 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 CRADDP78560 199 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 ELP6Q0PNE2 266 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 ITGA9Q13797 1035 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 GALNT3Q14435 633 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 PM20D1Q6GTS8 502 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 ADCK2Q7Z695 626 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 ARID3BQ8IVW6 561 aaPredicted RBP8.37□□□□□ -1.07
PTPRD-204ENST00000397606 SGF29Q96ES7 293 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 THOC1Q96FV9 657 aaKnown RBP8.37□□□□□ -1.07
PTPRD-204ENST00000397606 PIWIL1Q96J94 861 aaKnown RBP8.37□□□□□ -1.07
PTPRD-204ENST00000397606 FAM111AQ96PZ2 611 aa8.37□□□□□ -1.07
PTPRD-204ENST00000397606 ERVK-10P10266 1014 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 CSKP41240 450 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 THOP1P52888 689 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 POU4F1Q01851 419 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 ZNF33AQ06730 810 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 POM121L1PQ3SYA9 428 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 KBTBD12Q3ZCT8 623 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 TTC27Q6P3X3 843 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 SNX31Q8N9S9 440 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 IRF7Q92985 503 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 HEPHQ9BQS7 1158 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 C17orf80Q9BSJ5 609 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 OSGEPL1Q9H4B0 414 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 NMUR1Q9HB89 426 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 IGSF9Q9P2J2 1179 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 LNPEPQ9UIQ6 1025 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 NDUFS2O75306 463 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 H2AFYO75367 372 aaKnown RBP8.36□□□□□ -1.07
PTPRD-204ENST00000397606 ESRRBO95718 433 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 LATS1O95835 1130 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 ELFN1P0C7U0 828 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 ESRRAP11474 423 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms