RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 NCF1BA6NI72 391 aaPredicted RBP6.92□□□□□ -1.3
SMCO1-201ENST00000397537 ZSCAN5BA6NJL1 495 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 NCF1CA8MVU1 366 aaPredicted RBP6.92□□□□□ -1.3
SMCO1-201ENST00000397537 CDRT15L2A8MXV6 281 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 H0YIN7 160 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 SLC33A1O00400 549 aaPredicted RBP6.92□□□□□ -1.3
SMCO1-201ENST00000397537 WNT10BO00744 389 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 GMFGO60234 142 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 ZNF254O75437 659 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 DAB1O75553 588 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 MPIG6BO95866 241 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 GRPP07492 148 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 SRCP12931 536 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 CYP7A1P22680 504 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 GLRA2P23416 452 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 GPD2P43304 727 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 KCNJ1P48048 391 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 PTDSS1P48651 473 aaKnown RBP6.92□□□□□ -1.3
SMCO1-201ENST00000397537 HK2P52789 917 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 HADHBP55084 474 aaKnown RBP6.92□□□□□ -1.3
SMCO1-201ENST00000397537 TIRAPP58753 221 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 IL24Q13007 206 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 PLD1Q13393 1074 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 FAM187BQ17R55 369 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 KCNT1Q5JUK3 1230 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 MANEALQ5VSG8 457 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 PACS1Q6VY07 963 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 SLC36A4Q6YBV0 504 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 PQLC1Q8N2U9 271 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 RASGEF1CQ8N431 466 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 FSTL5Q8N475 847 aaPredicted RBP6.92□□□□□ -1.3
SMCO1-201ENST00000397537 ARL14Q8N4G2 192 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 AADATQ8N5Z0 425 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 NHLRC2Q8NBF2 726 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 TMEM52Q8NDY8 209 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 THRSPQ92748 146 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 ERO1AQ96HE7 468 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 PRICKLE1Q96MT3 831 aaPredicted RBP6.92□□□□□ -1.3
SMCO1-201ENST00000397537 PPP1R10Q96QC0 940 aaKnown RBP6.92□□□□□ -1.3
SMCO1-201ENST00000397537 GLIS2Q9BZE0 524 aaPredicted RBP6.92□□□□□ -1.3
SMCO1-201ENST00000397537 SLC25A32Q9H2D1 315 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 FANCEQ9HB96 536 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 BARX1Q9HBU1 254 aaPredicted RBP6.92□□□□□ -1.3
SMCO1-201ENST00000397537 LIN7CQ9NUP9 197 aaKnown RBP6.92□□□□□ -1.3
SMCO1-201ENST00000397537 GDAP2Q9NXN4 497 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 FBLN5Q9UBX5 448 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 AMACRQ9UHK6 382 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 MKLN1Q9UL63 735 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 SNX14Q9Y5W7 946 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 SLC4A4Q9Y6R1 1079 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 CEP162Q5TB80 1403 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 ABCA3Q99758 1704 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 SLC38A8A6NNN8 435 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 LCE2BO14633 110 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 FKTNO75072 461 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 GPR32O75388 356 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 FPR1P21462 350 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 CD68P34810 354 aaPredicted RBP6.92□□□□□ -1.3
SMCO1-201ENST00000397537 PTGER3P43115 390 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 CCR3P51677 355 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 PER3P56645 1201 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 NRG3P56975 720 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 CTXN1P60606 82 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 KCNMA1Q12791 1236 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 EFTUD2Q15029 972 aaKnown RBP eCLIP6.92□□□□□ -1.3
SMCO1-201ENST00000397537 RRS1Q15050 365 aaKnown RBP6.92□□□□□ -1.3
SMCO1-201ENST00000397537 SLC15A2Q16348 729 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 CYP2A13Q16696 494 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 HADHQ16836 314 aaKnown RBP6.92□□□□□ -1.3
SMCO1-201ENST00000397537 EMC4Q5J8M3 183 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 ADGRF1Q5T601 910 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 MROH9Q5TGP6 573 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 SASS6Q6UVJ0 657 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 MOXD1Q6UVY6 613 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 B3GNT6Q6ZMB0 384 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 PIK3AP1Q6ZUJ8 805 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 TXNRD3Q86VQ6 643 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 CEP57Q86XR8 500 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 CCDC13Q8IYE1 715 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 ZCCHC7Q8N3Z6 543 aaKnown RBP6.92□□□□□ -1.3
SMCO1-201ENST00000397537 OR52E1Q8NGJ3 308 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 BCAS4Q8TDM0 211 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 GTPBP3Q969Y2 492 aaKnown RBP6.92□□□□□ -1.3
SMCO1-201ENST00000397537 EPSTI1Q96J88 318 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 HIST1H2AHQ96KK5 128 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 HIST1H2AJQ99878 128 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 CCSER1Q9C0I3 900 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 JPH1Q9HDC5 661 aaPredicted RBP6.92□□□□□ -1.3
SMCO1-201ENST00000397537 PALMDQ9NP74 551 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 CENPMQ9NSP4 180 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 MBD1Q9UIS9 605 aaPredicted RBP6.92□□□□□ -1.3
SMCO1-201ENST00000397537 LEF1Q9UJU2 399 aaPredicted RBP6.92□□□□□ -1.3
SMCO1-201ENST00000397537 AGO2Q9UKV8 859 aaKnown RBP6.92□□□□□ -1.3
SMCO1-201ENST00000397537 GABRQQ9UN88 632 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 CDYLQ9Y232 598 aa6.92□□□□□ -1.3
SMCO1-201ENST00000397537 RRBP1Q9P2E9 1410 aaKnown RBP6.91□□□□□ -1.3
SMCO1-201ENST00000397537 SPATA31A1Q5TZJ5 1347 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 A0A0A0MRY4 1105 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 A0A1W2PR48 441 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 TCRBV21S2A2A0A5A6 115 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms